Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tph1a

Gene Name Gene ID Reads Annotation
tph1a ENSDARG00000029432, ENSDARG00000114918 24 tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]










Genes with expression patterns similar to tph1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tph1a ENSDARG00000029432, ENSDARG00000114918 24 4 - - - - 1.000 1.000 1.000 1.000 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
2. gngt2b ENSDARG00000103543 132 2 - - - - - 1.000 - 1.000 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
3. abcg1 ENSDARG00000063475 97 1.99 - - - - - 1.000 - 0.990 - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
4. CU184872.1 CU184872.1 15 1.873 - - - - 0.996 0.877 - - -
5. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1.825 - - - - - 1.000 - 0.825 - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
6. napgl napgl 39 1.819 - - - - - - 0.829 0.990 -
7. CDH12_1 CDH12_1 57 1.804 - - - - - - 0.833 0.971 -
8. TDRD7B ENSDARG00000077523 124 1.758 - - - - 0.929 - 0.829 - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
9. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.75 - - - - 0.948 - 0.802 - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
10. rab42a ENSDARG00000034215 692 1.737 - - - - - - 0.857 0.880 - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
11. npdc1 npdc1 221 1.714 - - - - - - 0.761 0.953 -
12. ric8a ENSDARG00000007247 229 1.689 - - - - 0.714 - - 0.975 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
13. atr ENSDARG00000079625 231 1.666 - - - - 0.826 - 0.840 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
14. OXSM ENSDARG00000098855 253 1.663 - - - - 0.756 - - 0.907 - 3-oxoacyl-ACP synthase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-170215-2]
15. foxl2 61 1.65 - - - - - - 0.740 0.910 - forkhead box L2, transcript variant X1
16. gtpbp2 272 1.638 - - - - 0.856 - - 0.782 - GTP binding protein 2
17. lrrfip1b ENSDARG00000095170 293 1.588 - - - - 0.865 - - 0.723 - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
18. CU638695.1 CU638695.1 90 1.58 - - - - 0.843 - - 0.737 -
19. SRR SRR 544 1.545 - - - - - - 0.836 0.709 -
20. zgc:113385 zgc:113385 297 1.53 - - - - 0.755 - - 0.775 -
21. SLC35A3_1 SLC35A3_1 35 1 - - - - - 1.000 - - -
22. ssh1b ENSDARG00000010031 4 1 - - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
23. ETV3L ETV3L 67 1 - - - - - - - 1.000 -
24. si:dkey-217m5.3 si:dkey-217m5.3 22 1 - - - - - 1.000 - - -
25. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
26. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - 1.000 - - -
27. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - - - - 1.000 - - -
28. zgc:173443 ENSDARG00000034403 26 1 - - - - - 1.000 - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
29. WSCD1 ENSDARG00000098113 35 1 - - - - - 1.000 - - - WSC domain containing 1 [Source:HGNC Symbol;Acc:HGNC:29060]
30. CU929230.1 ENSDARG00000030665 48 1 - - - - - 1.000 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
31. si:ch211-160d20.5 ENSDARG00000089627 2 1 - - - - - 1.000 - - - si:ch211-160d20.5 [Source:ZFIN;Acc:ZDB-GENE-050420-242]
32. CU896555.1 CU896555.1 27 1 - - - - - 1.000 - - -
33. agxtb ENSDARG00000018478 2 1 - - - - - 1.000 - - - alanine--glyoxylate and serine--pyruvate aminotransferase b [Source:ZFIN;Acc:ZDB-GENE-010302-3]
34. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
35. BEGAIN BEGAIN 39 1 - - - - - 1.000 - - -
36. LRRC61 ENSDARG00000077357 55 1 - - - - - 1.000 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
37. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
38. zgc:174680 ENSDARG00000100702 3 1 - - - - - 1.000 - - - zgc:174680 [Source:ZFIN;Acc:ZDB-GENE-080204-24]
39. EDN3_1 EDN3_1 24 1 - - - - - 1.000 - - -
40. CU695006.2 CU695006.2 1 1 - - - - - 1.000 - - -
41. CU681842.2 CU681842.2 1 1 - - - - - 1.000 - - -
42. ciita ENSDARG00000090851 5 1 - - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
43. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - 1.000 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
44. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
45. SOX8 SOX8 22 1 - - - - - 1.000 - - -
46. si:dkey-286j17.4 ENSDARG00000093402 1 1 - - - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
47. myh6 ENSDARG00000090637 66 1 - - - - - 1.000 - - - myosin, heavy chain 6, cardiac muscle, alpha [Source:ZFIN;Acc:ZDB-GENE-031112-1]
48. si:dkey-176g1.6 si:dkey-176g1.6 5 1 - - - - - 1.000 - - -
49. U3_5 U3_5 67 1 - - - - 1.000 - - - -
50. pcdh1g2 ENSDARG00000101232 5 1 - - - - - 1.000 - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
51. cnih2 ENSDARG00000043662, ENSDARG00000110467, ENSDARG00000113176 74 1 - - - - - 1.000 - - - cornichon family AMPA receptor auxiliary protein 2 [Source:ZFIN;Acc:ZDB-GENE-050320-96]
52. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
53. RAB1B RAB1B 20 1 - - - - - 1.000 - - -
54. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - 1.000 - - -
55. MDH1B ENSDARG00000018008 29 1 - - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
56. gnb3b ENSDARG00000002696 46 1 - - - - - - - 1.000 - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
57. CR383676.3_2 CR383676.3_2 9 1 - - - - - 1.000 - - -
58. GPR180 73 1 - - - - - 1.000 - - - G protein-coupled receptor 180, transcript variant X2
59. si:ch211-114l13.3 ENSDARG00000094346 2 1 - - - - - 1.000 - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
60. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -
61. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1 - - - - - - - 1.000 - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
62. si:ch211-133l5.5 si:ch211-133l5.5 123 1 - - - - - - - 1.000 -
63. CR774199.1 CR774199.1 1 1 - - - - - 1.000 - - -
64. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - - 1.000 - - -
65. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - 1.000 - - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
66. INSM2 ENSDARG00000020655 122 1 - - - - - 1.000 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
67. mir196b ENSDARG00000081346 35 1 - - - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
68. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
69. arntl2 ENSDARG00000041381, ENSDARG00000109690, ENSDARG00000116327 56 1 - - - - - 1.000 - - - aryl hydrocarbon receptor nuclear translocator-like 2 [Source:ZFIN;Acc:ZDB-GENE-000509-2]
70. BX323793.4 BX323793.4 8 1 - - - - - 1.000 - - -
71. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f
72. cryba1l2 ENSDARG00000014803 47 1 - - - - - 1.000 - - - crystallin, beta A1, like 2 [Source:ZFIN;Acc:ZDB-GENE-041010-40]
73. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - - - 1.000 - - -
74. hyal3 ENSDARG00000036818 23 1 - - - - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
75. jakmip2 ENSDARG00000053547 32 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
76. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
77. has3 ENSDARG00000057210, ENSDARG00000116537 108 1 - - - - - 1.000 - - - hyaluronan synthase 3 [Source:ZFIN;Acc:ZDB-GENE-021118-1]
78. WNK3 WNK3 36 1 - - - - - 1.000 - - -
79. ddit4 ENSDARG00000037618 37 1 - - - - - 1.000 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
80. EP400 ENSDARG00000100965 45 1 - - - - - 1.000 - - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
81. si:dkey-242e21.3 ENSDARG00000075723 77 1 - - - - - 1.000 - - - si:dkey-242e21.3 [Source:ZFIN;Acc:ZDB-GENE-100922-110]
82. si:dkey-9i5.1 si:dkey-9i5.1 36 1 - - - - - 1.000 - - -
83. BX537277.3 ENSDARG00000117762 1 1 - - - - - 1.000 - - -
84. DNAI2 DNAI2 6 1 - - - - - 1.000 - - -
85. BTBD17 BTBD17 53 1 - - - - - 1.000 - - -
86. nr2e1 ENSDARG00000017107 340 1 - - - - - 1.000 - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
87. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
88. SNORD94 SNORD94 57 1 - - - - - 1.000 - - -
89. CABZ01086292.1 CABZ01086292.1 1 1 - - - - - 1.000 - - -
90. RCVRN_1 RCVRN_1 46 1 - - - - - - - 1.000 -
91. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
92. cntnap5a ENSDARG00000073920 39 1 - - - - - 1.000 - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
93. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 - - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
94. pde5ab ENSDARG00000051915 18 1 - - - - - 1.000 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
95. CR936977.1 ENSDARG00000100144 4 1 - - - - - 1.000 - - -
96. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
97. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
98. zgc:173652_1 4 1 - - - - - 1.000 - - - zgc:173652
99. BX571880.1 ENSDARG00000097533 499 1 - - - - - 1.000 - - -
100. ZSWIM2 ENSDARG00000075700 8 1 - - - - - 1.000 - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]

There are 882 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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