Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tph1a

Gene Name Gene ID Reads Annotation
tph1a ENSDARG00000029432, ENSDARG00000114918 24 tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]










Genes with expression patterns similar to tph1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tph1a ENSDARG00000029432, ENSDARG00000114918 24 4 - - - - 1.000 1.000 1.000 1.000 - tryptophan hydroxylase 1 (tryptophan 5-monooxygenase) a [Source:ZFIN;Acc:ZDB-GENE-030317-1]
2. gngt2b ENSDARG00000103543 132 2 - - - - - 1.000 - 1.000 - guanine nucleotide binding protein (G protein), gamma transducing activity polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-091020-4]
3. abcg1 ENSDARG00000063475 97 1.99 - - - - - 1.000 - 0.990 - ATP-binding cassette, sub-family G (WHITE), member 1 [Source:ZFIN;Acc:ZDB-GENE-070424-84]
4. CU184872.1 CU184872.1 15 1.873 - - - - 0.996 0.877 - - -
5. NHLRC2 ENSDARG00000089581, ENSDARG00000113639 172 1.825 - - - - - 1.000 - 0.825 - NHL repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-100318-2]
6. napgl napgl 39 1.819 - - - - - - 0.829 0.990 -
7. CDH12_1 CDH12_1 57 1.804 - - - - - - 0.833 0.971 -
8. TDRD7B ENSDARG00000077523 124 1.758 - - - - 0.929 - 0.829 - - tudor domain containing 7 b [Source:ZFIN;Acc:ZDB-GENE-150109-14]
9. slx4 ENSDARG00000061414, ENSDARG00000093798 44 1.75 - - - - 0.948 - 0.802 - - SLX4 structure-specific endonuclease subunit homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050208-359]
10. rab42a ENSDARG00000034215 692 1.737 - - - - - - 0.857 0.880 - RAB42, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-1983]
11. npdc1 npdc1 221 1.714 - - - - - - 0.761 0.953 -
12. ric8a ENSDARG00000007247 229 1.689 - - - - 0.714 - - 0.975 - RIC8 guanine nucleotide exchange factor A [Source:ZFIN;Acc:ZDB-GENE-040927-18]
13. atr ENSDARG00000079625 231 1.666 - - - - 0.826 - 0.840 - - ATR serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-070912-458]
14. OXSM ENSDARG00000098855 253 1.663 - - - - 0.756 - - 0.907 - 3-oxoacyl-ACP synthase, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-170215-2]
15. foxl2 61 1.65 - - - - - - 0.740 0.910 - forkhead box L2, transcript variant X1
16. gtpbp2 272 1.638 - - - - 0.856 - - 0.782 - GTP binding protein 2
17. lrrfip1b ENSDARG00000095170 293 1.588 - - - - 0.865 - - 0.723 - leucine rich repeat (in FLII) interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-050208-324]
18. CU638695.1 CU638695.1 90 1.58 - - - - 0.843 - - 0.737 -
19. SRR SRR 544 1.545 - - - - - - 0.836 0.709 -
20. zgc:113385 zgc:113385 297 1.53 - - - - 0.755 - - 0.775 -
21. C22H19orf10_1 C22H19orf10_1 30 1 - - - - - 1.000 - - -
22. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - 1.000 - - - si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
23. BTBD17 BTBD17 53 1 - - - - - 1.000 - - -
24. si:dkey-13n15.11 ENSDARG00000078002 8 1 - - - - - 1.000 - - - si:dkey-13n15.11 [Source:ZFIN;Acc:ZDB-GENE-070705-295]
25. BX537277.3 ENSDARG00000117762 1 1 - - - - - 1.000 - - -
26. ZSWIM2 ENSDARG00000075700 8 1 - - - - - 1.000 - - - zinc finger, SWIM-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-070719-8]
27. BX571880.1 ENSDARG00000097533 499 1 - - - - - 1.000 - - -
28. EDN3_1 EDN3_1 24 1 - - - - - 1.000 - - -
29. si:dkey-263b2.2 si:dkey-263b2.2 1 1 - - - - - 1.000 - - -
30. vtg5 ENSDARG00000092126, ENSDARG00000113031 3 1 - - - - - 1.000 - - - vitellogenin 5 [Source:ZFIN;Acc:ZDB-GENE-001201-4]
31. PGBD4 ENSDARG00000079328 20 1 - - - - - 1.000 - - - piggyBac transposable element derived 4 [Source:ZFIN;Acc:ZDB-GENE-091204-417]
32. si:ch211-67f24.7 ENSDARG00000092721, ENSDARG00000092896 11 1 - - - - - 1.000 - - - si:ch211-67f24.7 [Source:ZFIN;Acc:ZDB-GENE-090313-129]
33. CHST8 23 1 - - - - - 1.000 - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 8, transcript variant X1
34. SOX8 SOX8 22 1 - - - - - 1.000 - - -
35. arr3a ENSDARG00000056511, ENSDARG00000114648 192 1 - - - - - - - 1.000 - arrestin 3a, retinal (X-arrestin) [Source:ZFIN;Acc:ZDB-GENE-040718-102]
36. si:ch211-153f2.3 ENSDARG00000098980 66 1 - - - - - 1.000 - - - si:ch211-153f2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-135]
37. CR936977.1 ENSDARG00000100144 4 1 - - - - - 1.000 - - -
38. rbbp9 ENSDARG00000040713 12 1 - - - - - 1.000 - - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
39. si:ch211-114l13.3 ENSDARG00000094346 2 1 - - - - - 1.000 - - - si:ch211-114l13.3 [Source:ZFIN;Acc:ZDB-GENE-070424-112]
40. CR392036.1 ENSDARG00000069895 1 1 - - - - - 1.000 - - - GTPase IMAP family member 8-like [Source:NCBI gene;Acc:101884429]
41. si:ch211-241n15.3 ENSDARG00000088915 5 1 - - - - - 1.000 - - - si:ch211-241n15.3 [Source:ZFIN;Acc:ZDB-GENE-110913-169]
42. CU681842.2 CU681842.2 1 1 - - - - - 1.000 - - -
43. cbln10 ENSDARG00000023157 17 1 - - - - - 1.000 - - - cerebellin 10 [Source:ZFIN;Acc:ZDB-GENE-030131-4615]
44. nfixa ENSDARG00000043226 14 1 - - - - - 1.000 - - - nuclear factor I/Xa [Source:ZFIN;Acc:ZDB-GENE-080722-15]
45. si:rp71-23d18.4 ENSDARG00000092779 1 1 - - - - - 1.000 - - - si:rp71-23d18.4 [Source:ZFIN;Acc:ZDB-GENE-050208-761]
46. sostdc1b ENSDARG00000056021, ENSDARG00000114829 33 1 - - - - - 1.000 - - - sclerostin domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060503-653]
47. BX323793.4 BX323793.4 8 1 - - - - - 1.000 - - -
48. med11 ENSDARG00000086416 13 1 - - - - - - - 1.000 - mediator complex subunit 11 [Source:ZFIN;Acc:ZDB-GENE-091207-2]
49. BEGAIN BEGAIN 39 1 - - - - - 1.000 - - -
50. caps2 ENSDARG00000058486 4 1 - - - - - 1.000 - - - calcyphosine 2 [Source:ZFIN;Acc:ZDB-GENE-091204-449]
51. MDH1B ENSDARG00000018008 29 1 - - - - - 1.000 - - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
52. si:ch211-188c16.1 ENSDARG00000077288 16 1 - - - - - 1.000 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
53. RAB1B RAB1B 20 1 - - - - - 1.000 - - -
54. gad1a ENSDARG00000093411 2 1 - - - - - 1.000 - - - glutamate decarboxylase 1a [Source:ZFIN;Acc:ZDB-GENE-070912-472]
55. ttc25 ENSDARG00000058140 2 1 - - - - - 1.000 - - - tetratricopeptide repeat domain 25 [Source:ZFIN;Acc:ZDB-GENE-040426-995]
56. PSMB11_1 PSMB11_1 2 1 - - - - - 1.000 - - -
57. pde5ab ENSDARG00000051915 18 1 - - - - - 1.000 - - - phosphodiesterase 5A, cGMP-specific, b [Source:ZFIN;Acc:ZDB-GENE-060824-4]
58. CABZ01074298.1 ENSDARG00000087767 6 1 - - - - - 1.000 - - - uncharacterized LOC100334396 [Source:NCBI gene;Acc:100334396]
59. ssh1b ENSDARG00000010031 4 1 - - - - - 1.000 - - - slingshot protein phosphatase 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5909]
60. smarcd3b ENSDARG00000019969 11 1 - - - - - 1.000 - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3b [Source:ZFIN;Acc:ZDB-GENE-080509-2]
61. SLC22A7_1 SLC22A7_1 2 1 - - - - - 1.000 - - -
62. ddit4 ENSDARG00000037618 37 1 - - - - - 1.000 - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
63. jakmip2 ENSDARG00000053547 32 1 - - - - - 1.000 - - - janus kinase and microtubule interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-091204-293]
64. or103-5 ENSDARG00000075128 1 1 - - - - - 1.000 - - - odorant receptor, family C, subfamily 103, member 5 [Source:ZFIN;Acc:ZDB-GENE-070806-52]
65. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - 1.000 - - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
66. si:dkey-217m5.3 si:dkey-217m5.3 22 1 - - - - - 1.000 - - -
67. si:dkey-200l5.4 ENSDARG00000095294 13 1 - - - - - 1.000 - - - si:dkey-200l5.4 [Source:ZFIN;Acc:ZDB-GENE-091204-393]
68. si:ch211-133l5.5 si:ch211-133l5.5 123 1 - - - - - - - 1.000 -
69. INSM2 ENSDARG00000020655 122 1 - - - - - 1.000 - - - INSM transcriptional repressor 2 [Source:HGNC Symbol;Acc:HGNC:17539]
70. CU695006.2 CU695006.2 1 1 - - - - - 1.000 - - -
71. mirlet7f 1 1 - - - - - 1.000 - - - microRNA let7f
72. si:dkey-53f14.2 si:dkey-53f14.2 4 1 - - - - - 1.000 - - -
73. CU896555.1 CU896555.1 27 1 - - - - - 1.000 - - -
74. fgf14 ENSDARG00000040982 5 1 - - - - - 1.000 - - - fibroblast growth factor 14 [Source:ZFIN;Acc:ZDB-GENE-060506-1]
75. samsn1b ENSDARG00000078647 8 1 - - - - - 1.000 - - - SAM domain, SH3 domain and nuclear localisation signals 1b [Source:ZFIN;Acc:ZDB-GENE-041010-135]
76. mir196b ENSDARG00000081346 35 1 - - - - - 1.000 - - - microRNA 196b [Source:ZFIN;Acc:ZDB-MIRNAG-081212-1]
77. KIAA0319 KIAA0319 2 1 - - - - - 1.000 - - -
78. CU929230.1 ENSDARG00000030665 48 1 - - - - - 1.000 - - - transcription elongation regulator 1b (CA150) [Source:NCBI gene;Acc:797473]
79. si:dkey-16p6.1_1 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 37 1 - - - - - 1.000 - - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
80. CR936540.2 CR936540.2 4 1 - - - - - 1.000 - - -
81. gnb3b ENSDARG00000002696 46 1 - - - - - - - 1.000 - guanine nucleotide binding protein (G protein), beta polypeptide 3b [Source:ZFIN;Acc:ZDB-GENE-040426-2280]
82. RCVRN_1 RCVRN_1 46 1 - - - - - - - 1.000 -
83. ciita ENSDARG00000090851 5 1 - - - - - 1.000 - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
84. PLA2G4C_2 PLA2G4C_2 10 1 - - - - - 1.000 - - -
85. si:ch211-267j24.2 si:ch211-267j24.2 7 1 - - - - - 1.000 - - -
86. hyal3 ENSDARG00000036818 23 1 - - - - - 1.000 - - - hyaluronoglucosaminidase 3 [Source:ZFIN;Acc:ZDB-GENE-081104-366]
87. rhoga ENSDARG00000068653 13 1 - - - - - 1.000 - - - ras homolog family member Ga [Source:ZFIN;Acc:ZDB-GENE-060503-820]
88. crhbp ENSDARG00000024831 63 1 - - - - - 1.000 - - - corticotropin releasing hormone binding protein [Source:ZFIN;Acc:ZDB-GENE-040801-196]
89. si:dkey-254e13.13 si:dkey-254e13.13 6 1 - - - - - 1.000 - - -
90. zgc:173652_1 4 1 - - - - - 1.000 - - - zgc:173652
91. arhgap20 ENSDARG00000089326 10 1 - - - - - 1.000 - - - Rho GTPase activating protein 20 [Source:ZFIN;Acc:ZDB-GENE-071015-1]
92. si:ch211-12h2.7 si:ch211-12h2.7 1 1 - - - - - 1.000 - - -
93. si:dkey-286j17.4 ENSDARG00000093402 1 1 - - - - - 1.000 - - - si:dkey-286j17.4 [Source:ZFIN;Acc:ZDB-GENE-130530-2]
94. sparcl1 ENSDARG00000074989 80 1 - - - - - 1.000 - - - SPARC-like 1 [Source:ZFIN;Acc:ZDB-GENE-060130-6]
95. nr2e1 ENSDARG00000017107 340 1 - - - - - 1.000 - - - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
96. DNAI2 DNAI2 6 1 - - - - - 1.000 - - -
97. si:ch211-160d20.5 ENSDARG00000089627 2 1 - - - - - 1.000 - - - si:ch211-160d20.5 [Source:ZFIN;Acc:ZDB-GENE-050420-242]
98. pcdh1g2 ENSDARG00000101232 5 1 - - - - - 1.000 - - - protocadherin 1 gamma 2 [Source:ZFIN;Acc:ZDB-GENE-050608-2]
99. ddx46 ENSDARG00000099458 24 1 - - - - - 1.000 - - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 46 [Source:ZFIN;Acc:ZDB-GENE-030131-667]
100. CABZ01056274.1 CABZ01056274.1 3 1 - - - - - 1.000 - - -

There are 882 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA