Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tpcn2

Gene Name Gene ID Reads Annotation
tpcn2 ENSDARG00000100420 626 two pore segment channel 2 [Source:ZFIN;Acc:ZDB-GENE-061103-202]










Genes with expression patterns similar to tpcn2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tpcn2 ENSDARG00000100420 626 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 two pore segment channel 2 [Source:ZFIN;Acc:ZDB-GENE-061103-202]
2. C2CD2 ENSDARG00000105000 2573 1.593 - 0.859 - 0.734 - - - - - C2 calcium-dependent domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-110728-1]
3. tesk2 ENSDARG00000061450 261 1.543 - - - - - 0.829 0.714 - - testis associated actin remodelling kinase 2 [Source:ZFIN;Acc:ZDB-GENE-070209-68]
4. vps9d1 ENSDARG00000019195 582 1.538 - 0.821 - - - 0.717 - - - VPS9 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050306-57]
5. oxnad1 ENSDARG00000062664 2684 1.482 - 0.772 - - - - 0.710 - - oxidoreductase NAD-binding domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-199]
6. SORCS2 ENSDARG00000077465 185 1.474 - - - - - 0.772 - - 0.702 sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
7. SH3PXD2A SH3PXD2A 177 1.447 0.719 - - - - - - - 0.728
8. rab23 ENSDARG00000004151 1077 1.434 - - - - - 0.708 0.726 - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
9. tspan33 tspan33 453 1.426 - 0.722 - - - - - 0.704 -
10. CR762484.3 CR762484.3 395 1.42 - - - - - 0.700 - - 0.720
11. ppfibp2b ENSDARG00000029168 961 0.914 - - - - - 0.914 - - - PTPRF interacting protein, binding protein 2b (liprin beta 2) [Source:ZFIN;Acc:ZDB-GENE-040718-54]
12. ZFHX2 2463 0.901 - - - - - 0.901 - - - zinc finger homeobox 2, transcript variant X2
13. ddx42 ENSDARG00000037928 1659 0.892 - - - - - 0.892 - - - DEAD (Asp-Glu-Ala-Asp) box helicase 42 [Source:ZFIN;Acc:ZDB-GENE-050706-53]
14. galnt2 ENSDARG00000003829 891 0.89 - - - - - 0.890 - - - UDP-N-acetyl-alpha-D-galactosamine:polypeptide N-acetylgalactosaminyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-041111-110]
15. rab7 ENSDARG00000020497, ENSDARG00000109813, ENSDARG00000110814 2627 0.889 - 0.889 - - - - - - - RAB7, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-1352]
16. chl1a ENSDARG00000077881 1488 0.886 - - - - - 0.886 - - - cell adhesion molecule L1-like a [Source:ZFIN;Acc:ZDB-GENE-090313-201]
17. thrab ENSDARG00000052654 315 0.885 - - - - - 0.885 - - - thyroid hormone receptor alpha b [Source:ZFIN;Acc:ZDB-GENE-060613-1]
18. pi4k2b ENSDARG00000013881 1337 0.884 - - - - - 0.884 - - - phosphatidylinositol 4-kinase type 2 beta [Source:ZFIN;Acc:ZDB-GENE-070112-990]
19. arhgap5 ENSDARG00000061294 2228 0.879 - - - - - 0.879 - - - Rho GTPase activating protein 5 [Source:ZFIN;Acc:ZDB-GENE-081014-1]
20. adamtsl7 ENSDARG00000055439 575 0.873 - - - - - 0.873 - - - ADAMTS-like 7 [Source:ZFIN;Acc:ZDB-GENE-070816-2]
21. nipa2 ENSDARG00000055912 1574 0.871 - - - - - - - 0.871 - NIPA magnesium transporter 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2134]
22. vsig10 ENSDARG00000058605, ENSDARG00000111389 361 0.868 - - - - - 0.868 - - - V-set and immunoglobulin domain containing 10 [Source:ZFIN;Acc:ZDB-GENE-030131-7476]
23. ttc13 ENSDARG00000063242 1360 0.862 - - - - - 0.862 - - - tetratricopeptide repeat domain 13 [Source:ZFIN;Acc:ZDB-GENE-080722-25]
24. si:ch211-250c4.3 si:ch211-250c4.3 677 0.861 - - - - - 0.861 - - -
25. pmaip1 ENSDARG00000089307 236 0.861 - - - - - 0.861 - - - phorbol-12-myristate-13-acetate-induced protein 1 [Source:ZFIN;Acc:ZDB-GENE-070119-3]
26. vcanb ENSDARG00000009401 3611 0.86 - - - - - 0.860 - - - versican b [Source:ZFIN;Acc:ZDB-GENE-030131-2185]
27. azi2 ENSDARG00000102419 1380 0.859 - 0.859 - - - - - - - 5-azacytidine induced 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2097]
28. FP236513.2 FP236513.2 443 0.859 - - - 0.859 - - - - -
29. GOLPH3 ENSDARG00000052851, ENSDARG00000109334 3117 0.855 - 0.855 - - - - - - - golgi phosphoprotein 3 [Source:ZFIN;Acc:ZDB-GENE-041010-209]
30. tmem248 ENSDARG00000018825 1560 0.851 - - - - - - 0.851 - - transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
31. zfpm1 ENSDARG00000041572, ENSDARG00000109585 331 0.85 - - - - - 0.850 - - - zinc finger protein, FOG family member 1 [Source:ZFIN;Acc:ZDB-GENE-050419-238]
32. acy1 ENSDARG00000038475, ENSDARG00000111129 576 0.848 - 0.848 - - - - - - - aminoacylase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-755]
33. cmasa ENSDARG00000057334 949 0.846 - - - - - 0.846 - - - cytidine monophosphate N-acetylneuraminic acid synthetase a [Source:ZFIN;Acc:ZDB-GENE-050420-277]
34. si:dkey-193c22.2 ENSDARG00000076735 2791 0.846 - - - - - 0.846 - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
35. srfa ENSDARG00000053918 1773 0.846 - - - - - 0.846 - - - serum response factor a [Source:ZFIN;Acc:ZDB-GENE-990714-29]
36. mcf2la ENSDARG00000075859 882 0.846 - - - - - 0.846 - - - mcf.2 cell line derived transforming sequence-like a [Source:ZFIN;Acc:ZDB-GENE-090312-122]
37. cldnj ENSDARG00000058880 59 0.845 0.845 - - - - - - - - claudin j [Source:ZFIN;Acc:ZDB-GENE-010328-10]
38. sh3gl1a ENSDARG00000067958 1105 0.838 - - - - - 0.838 - - - SH3-domain GRB2-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-4524]
39. gps2 ENSDARG00000035558, ENSDARG00000113597 1233 0.836 - - - - - 0.836 - - - G protein pathway suppressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1176]
40. RBM12B_1 RBM12B_1 1192 0.836 - - - - - 0.836 - - -
41. bcl2l10 ENSDARG00000026766 1426 0.834 - 0.834 - - - - - - - BCL2 like 10 [Source:ZFIN;Acc:ZDB-GENE-030825-2]
42. CLDND1 CLDND1 155 0.833 - - - - - 0.833 - - -
43. fmnl2a ENSDARG00000012586 136 0.832 - - - 0.832 - - - - - formin-like 2a [Source:ZFIN;Acc:ZDB-GENE-081105-70]
44. nt5c1bb ENSDARG00000033742 1248 0.828 - - - - - 0.828 - - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
45. zgc:158343 ENSDARG00000099411, ENSDARG00000110524, ENSDARG00000110558, ENSDARG00000112808 1061 0.828 - - - - - 0.828 - - - zgc:158343 [Source:ZFIN;Acc:ZDB-GENE-061201-9]
46. kcnc4 ENSDARG00000061288, ENSDARG00000113894 95 0.827 - - - - - 0.827 - - - potassium voltage-gated channel, Shaw-related subfamily, member 4 [Source:ZFIN;Acc:ZDB-GENE-060503-773]
47. si:ch211-246m6.5 ENSDARG00000011673, ENSDARG00000103750 1081 0.827 - - - - - 0.827 - - - si:ch211-246m6.5 [Source:ZFIN;Acc:ZDB-GENE-050208-577]
48. CACHD1 ENSDARG00000061590 1287 0.827 0.827 - - - - - - - - cache domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100819-3]
49. zgc:92380 ENSDARG00000041339 1867 0.825 - - - - - 0.825 - - - zgc:92380 [Source:ZFIN;Acc:ZDB-GENE-040801-221]
50. rnaset2 ENSDARG00000036282 2226 0.824 - - - - - 0.824 - - - ribonuclease T2 [Source:ZFIN;Acc:ZDB-GENE-030131-2513]
51. rab25a ENSDARG00000058800 451 0.824 - - - - - 0.824 - - - RAB25, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-041212-69]
52. EHBP1 ENSDARG00000043643 966 0.824 - - - - - 0.824 - - - EH domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091006-4]
53. MYO5A MYO5A 595 0.823 - - - - - - 0.823 - -
54. mocs3 ENSDARG00000008239 163 0.823 - - - - - 0.823 - - - molybdenum cofactor synthesis 3 [Source:ZFIN;Acc:ZDB-GENE-040426-782]
55. ube2i2 ube2i2 4828 0.821 - - - - - 0.821 - - -
56. ppp2r5d ENSDARG00000014428 771 0.821 - - - - - 0.821 - - - protein phosphatase 2, regulatory subunit B', delta [Source:ZFIN;Acc:ZDB-GENE-040426-2568]
57. rgs12b ENSDARG00000036774 5088 0.82 - - - - - 0.820 - - - regulator of G protein signaling 12b [Source:ZFIN;Acc:ZDB-GENE-031006-13]
58. RUNDC1 ENSDARG00000091962 693 0.82 - - - - - 0.820 - - - RUN domain containing 1 [Source:HGNC Symbol;Acc:HGNC:25418]
59. WDR44 ENSDARG00000060249, ENSDARG00000114185, ENSDARG00000114247, ENSDARG00000117103 2545 0.819 - - - - - 0.819 - - - WD repeat domain 44 [Source:NCBI gene;Acc:569045]
60. TMEM14A ENSDARG00000095157 611 0.819 - 0.819 - - - - - - - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
61. fgfr2 ENSDARG00000058115 6743 0.817 - - - - - 0.817 - - - fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
62. ankfy1 ENSDARG00000061013, ENSDARG00000111387 952 0.817 - - - - - 0.817 - - - ankyrin repeat and FYVE domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041222-1]
63. lamb1a ENSDARG00000101209 5396 0.817 - - - - - 0.817 - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
64. cops2 ENSDARG00000004785 4911 0.815 - 0.815 - - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
65. rap1a rap1a 5654 0.814 - - - - - - 0.814 - -
66. papss2b ENSDARG00000056600 2872 0.814 - 0.814 - - - - - - - 3'-phosphoadenosine 5'-phosphosulfate synthase 2b [Source:ZFIN;Acc:ZDB-GENE-010323-5]
67. si:rp71-3c13.3 si:rp71-3c13.3 128 0.813 - 0.813 - - - - - - -
68. tspan14 ENSDARG00000055938, ENSDARG00000117111 4518 0.812 - - - - - - 0.812 - - tetraspanin 14 [Source:ZFIN;Acc:ZDB-GENE-060825-329]
69. cblb ENSDARG00000015199, ENSDARG00000116429 1129 0.811 - - - - - 0.811 - - - Cbl proto-oncogene B, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030616-417]
70. crp4 714 0.81 - - - - - 0.810 - - - C-reactive protein 4
71. GPR31 431 0.81 - 0.810 - - - - - - - G protein-coupled receptor 31
72. ptgs2a ENSDARG00000004539 1207 0.81 - - - - - 0.810 - - - prostaglandin-endoperoxide synthase 2a [Source:ZFIN;Acc:ZDB-GENE-020530-2]
73. shoc2 ENSDARG00000040853, ENSDARG00000112058, ENSDARG00000116564 2264 0.809 - - - - - 0.809 - - - SHOC2 leucine-rich repeat scaffold protein [Source:ZFIN;Acc:ZDB-GENE-050208-523]
74. nr1h3 ENSDARG00000098439 859 0.809 - - - - - - 0.809 - - nuclear receptor subfamily 1, group H, member 3 [Source:ZFIN;Acc:ZDB-GENE-050410-7]
75. baxb ENSDARG00000030881 390 0.809 - - - - - 0.809 - - - BCL2 associated X, apoptosis regulator b [Source:ZFIN;Acc:ZDB-GENE-050227-21]
76. usp1 ENSDARG00000056414 1816 0.809 - - - - - 0.809 - - - ubiquitin specific peptidase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-726]
77. rab9a ENSDARG00000045027 201 0.809 - - - 0.809 - - - - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
78. skia ENSDARG00000042151 1850 0.808 - - - - - - - 0.808 - v-ski avian sarcoma viral oncogene homolog a [Source:ZFIN;Acc:ZDB-GENE-990715-9]
79. mbpb ENSDARG00000089413 3334 0.808 - - - - - 0.808 - - - myelin basic protein b [Source:ZFIN;Acc:ZDB-GENE-030429-21]
80. doc2d ENSDARG00000079962 76 0.808 - - - - - 0.808 - - - double C2-like domains, delta [Source:ZFIN;Acc:ZDB-GENE-081104-451]
81. ehd1a ENSDARG00000098853 1092 0.808 - 0.808 - - - - - - - EH-domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2518]
82. timmdc1 ENSDARG00000053466 2179 0.807 - - - - - - 0.807 - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
83. gadd45bb ENSDARG00000013576 331 0.807 - - - - - 0.807 - - - growth arrest and DNA-damage-inducible, beta b [Source:ZFIN;Acc:ZDB-GENE-050223-1]
84. kansl3 ENSDARG00000029556 2487 0.807 - - - - - 0.807 - - - KAT8 regulatory NSL complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050809-132]
85. paxip1 ENSDARG00000005606 1417 0.806 - 0.806 - - - - - - - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
86. FAM107A ENSDARG00000075540 214 0.806 - - - - - 0.806 - - - family with sequence similarity 107 member A [Source:HGNC Symbol;Acc:HGNC:30827]
87. BX004880.1 BX004880.1 638 0.806 - - - - - 0.806 - - -
88. C10H21orf91 C10H21orf91 644 0.806 - 0.806 - - - - - - -
89. si:ch211-213a13.1 ENSDARG00000090600 381 0.806 - - - - - 0.806 - - - si:ch211-213a13.1 [Source:ZFIN;Acc:ZDB-GENE-050208-471]
90. get4 ENSDARG00000024398 1818 0.805 - - - - - - 0.805 - - golgi to ER traffic protein 4 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5399]
91. notch2 ENSDARG00000043130 4430 0.805 0.805 - - - - - - - - notch 2 [Source:ZFIN;Acc:ZDB-GENE-000329-4]
92. efr3bb 1533 0.805 - - - - - 0.805 - - - EFR3 homolog Bb (S. cerevisiae), transcript variant X2
93. megf6b ENSDARG00000074808 847 0.804 - - - - - 0.804 - - - multiple EGF-like-domains 6b [Source:ZFIN;Acc:ZDB-GENE-101112-3]
94. crnkl1 ENSDARG00000007901 1952 0.804 - 0.804 - - - - - - - crooked neck pre-mRNA splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-694]
95. loh12cr1 loh12cr1 346 0.803 - - - - - 0.803 - - -
96. rmnd5b ENSDARG00000043359 3054 0.803 - - - - - 0.803 - - - required for meiotic nuclear division 5 homolog B [Source:ZFIN;Acc:ZDB-GENE-040426-1744]
97. CU655970.1 CU655970.1 2123 0.803 - - - - - 0.803 - - -
98. ppip5k2 ENSDARG00000078441 1074 0.803 - 0.803 - - - - - - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
99. TRIM14_6 TRIM14_6 342 0.803 0.803 - - - - - - - -
100. kctd6a ENSDARG00000043095 480 0.803 - - - - - 0.803 - - - potassium channel tetramerization domain containing 6a [Source:ZFIN;Acc:ZDB-GENE-050208-474]

There are 587 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA