Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tox3

Gene Name Gene ID Reads Annotation
tox3 ENSDARG00000073957 3075 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]










Genes with expression patterns similar to tox3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tox3 ENSDARG00000073957 3075 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 TOX high mobility group box family member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-209]
2. CABZ01111990.1 CABZ01111990.1 4374 3.339 - - - 0.998 - 0.778 - 0.716 0.847
3. mex3b ENSDARG00000058369 1867 3.142 - - - - 0.768 - 0.709 0.752 0.913 mex-3 RNA binding family member B [Source:ZFIN;Acc:ZDB-GENE-030131-2628]
4. her4.1 ENSDARG00000056732 1264 2.523 - - - - 0.841 - - 0.793 0.889 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
5. FP016176.1 FP016176.1 7030 2.459 - - - 0.998 - 0.750 0.711 - -
6. TUBB8P7_2 TUBB8P7_2 565 2.433 - 0.784 - - - 0.831 - - 0.818
7. pou3f2a ENSDARG00000070220 817 2.394 - - - - 0.811 0.864 - 0.719 - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
8. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.389 - - - - 0.776 0.809 - - 0.804 POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
9. CRIP2 ENSDARG00000070670 323 2.378 - - - - - 0.760 0.867 0.751 - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
10. rab39b rab39b 449 2.348 - - - - - 0.709 - 0.780 0.859
11. nbeaa ENSDARG00000070080 862 2.335 - - - - 0.808 0.778 - 0.749 - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
12. tox4 tox4 1671 2.328 - - - - - - 0.761 0.703 0.864
13. ZFHX3 ENSDARG00000103057 7759 2.286 - 0.833 - - - 0.705 - 0.748 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
14. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.279 - - - - 0.751 0.747 - 0.781 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
15. fabp7a ENSDARG00000007697 5211 2.262 - - - - 0.736 0.795 - - 0.731 fatty acid binding protein 7, brain, a [Source:ZFIN;Acc:ZDB-GENE-000627-1]
16. carm1 ENSDARG00000018698 5599 2.259 - - - - 0.731 0.761 - - 0.767 coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
17. lhx1b ENSDARG00000007944, ENSDARG00000111635 254 2.251 0.751 - - - - 0.788 - 0.712 - LIM homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-980526-116]
18. hnrnpr ENSDARG00000014569 3423 2.172 - - - - 0.702 0.709 0.761 - - heterogeneous nuclear ribonucleoprotein R [Source:ZFIN;Acc:ZDB-GENE-040426-2766]
19. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.853 - - - 0.999 - - - - 0.854 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
20. srsf6b ENSDARG00000016783 9926 1.843 - - 0.926 - - - - - 0.917 serine/arginine-rich splicing factor 6b [Source:ZFIN;Acc:ZDB-GENE-041219-1]
21. sox12 ENSDARG00000025847 681 1.805 - - - - - 0.892 - - 0.913 SRY (sex determining region Y)-box 12 [Source:ZFIN;Acc:ZDB-GENE-040724-33]
22. gdi1 ENSDARG00000056122 4106 1.753 - - - - - 0.895 - - 0.858 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
23. GSG2 GSG2 1162 1.749 - 0.792 0.957 - - - - - -
24. lipg ENSDARG00000031044 1516 1.742 - 0.785 0.957 - - - - - - lipase, endothelial [Source:ZFIN;Acc:ZDB-GENE-040426-699]
25. 5S_rRNA_21 5S_rRNA_21 1323 1.742 - 0.853 - - - - - - 0.889
26. DACT3_1 DACT3_1 1235 1.733 - - 0.958 - - - - 0.775 -
27. abcf1 ENSDARG00000031795 8635 1.732 - - 0.935 - - - - - 0.797 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
28. dnajc2 ENSDARG00000070477 902 1.732 - 0.776 0.956 - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1912]
29. eif3k ENSDARG00000068289 1102 1.721 - - 0.956 - - - 0.765 - - eukaryotic translation initiation factor 3, subunit K [Source:ZFIN;Acc:ZDB-GENE-050417-45]
30. hdgfrp2 7462 1.721 - - 0.975 - - - - - 0.746 hepatoma-derived growth factor-related protein 2, transcript variant X1
31. rheb ENSDARG00000090213 1432 1.707 - - - - - 0.820 - - 0.887 Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
32. tle2 5014 1.707 - - 0.948 - 0.759 - - - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
33. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.705 - - - 0.994 - - - 0.711 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
34. cspg5a ENSDARG00000069981 1699 1.704 - - - - - 0.847 - - 0.857 chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
35. SPIN4_1 SPIN4_1 2562 1.702 - 0.819 - - - - - - 0.883
36. ptprsb 1085 1.701 - - - - - 0.793 - - 0.908 protein tyrosine phosphatase, receptor type, s, b
37. lhx5 ENSDARG00000057936 785 1.696 - - - - - - - 0.848 0.848 LIM homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-484]
38. slc29a1a ENSDARG00000101289 2074 1.688 - - - - 0.813 - - - 0.875 solute carrier family 29 (equilibrative nucleoside transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-050913-138]
39. AL772300.3 AL772300.3 1752 1.674 - - 0.957 - 0.717 - - - -
40. egr2a ENSDARG00000044098 1101 1.672 - - 0.958 - 0.714 - - - - early growth response 2a [Source:ZFIN;Acc:ZDB-GENE-030723-6]
41. ssbp4 ENSDARG00000056483 10196 1.67 - - - - - 0.868 - 0.802 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
42. umps ENSDARG00000012215 4564 1.667 - - 0.857 - - - - - 0.810 uridine monophosphate synthetase [Source:ZFIN;Acc:ZDB-GENE-040426-785]
43. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 1.663 - 0.705 0.958 - - - - - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
44. tmem59l ENSDARG00000003655 1536 1.662 - - - - - 0.809 - - 0.853 transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
45. syncripl ENSDARG00000026723 3889 1.654 - - - - - 0.741 - - 0.913 synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
46. khdrbs2 ENSDARG00000069469 160 1.652 - - - - - 0.763 0.889 - - KH domain containing, RNA binding, signal transduction associated 2 [Source:ZFIN;Acc:ZDB-GENE-061013-497]
47. TNPO2 ENSDARG00000042887 2290 1.652 0.737 - - - - - - - 0.915 transportin 2 [Source:HGNC Symbol;Acc:HGNC:19998]
48. si:dkey-28b4.8 ENSDARG00000002840 1277 1.65 - 0.840 - - - 0.810 - - - si:dkey-28b4.8 [Source:ZFIN;Acc:ZDB-GENE-090501-2]
49. nes ENSDARG00000088805 2710 1.642 - - - - 0.902 0.740 - - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
50. rusc1 ENSDARG00000078125 617 1.639 - - - - - 0.775 - - 0.864 RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
51. dpf3 ENSDARG00000025309 1376 1.629 - - - - - - - 0.738 0.891 D4, zinc and double PHD fingers, family 3 [Source:ZFIN;Acc:ZDB-GENE-041014-190]
52. ccdc82 ENSDARG00000014966 563 1.628 - - - - - - 0.836 - 0.792 coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
53. mta2 ENSDARG00000013031 2932 1.628 - - - - - - - 0.830 0.798 metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
54. fam102bb ENSDARG00000002333 1483 1.626 - - - - - 0.818 - - 0.808 family with sequence similarity 102, member B, b [Source:ZFIN;Acc:ZDB-GENE-041014-330]
55. cd99l2 ENSDARG00000056722 5036 1.622 - - - - 0.756 - - - 0.866 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
56. ptn ENSDARG00000102340 229 1.613 - - - - 0.816 - - - 0.797 pleiotrophin [Source:ZFIN;Acc:ZDB-GENE-030624-1]
57. FRG1 ENSDARG00000056504 1196 1.612 - 0.794 - - - - - - 0.818 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
58. ADAM22 ENSDARG00000060532 2259 1.611 - - - - - - - 0.766 0.845 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
59. papss1 ENSDARG00000057099 809 1.608 - - - - - - 0.743 - 0.865 3'-phosphoadenosine 5'-phosphosulfate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-080721-5]
60. dhdds ENSDARG00000039851 1135 1.606 - 0.848 - - - - - - 0.758 dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
61. ank2b ENSDARG00000043313 3065 1.605 - - - - - 0.736 - - 0.869 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
62. rcor2 ENSDARG00000008278 1678 1.597 - - - - 0.726 - - 0.871 - REST corepressor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1812]
63. kif5c ENSDARG00000076027 424 1.597 - - - - - 0.720 - - 0.877 kinesin family member 5C [Source:ZFIN;Acc:ZDB-GENE-081105-14]
64. tfap2b ENSDARG00000012667 746 1.595 - - - - - - - 0.703 0.892 transcription factor AP-2 beta [Source:ZFIN;Acc:ZDB-GENE-050417-394]
65. kif15 ENSDARG00000012073 1936 1.595 - - - - 0.739 - - - 0.856 kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
66. nova2 ENSDARG00000017673 7685 1.594 - - - - - 0.744 - - 0.850 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
67. bre bre 1233 1.588 - 0.802 - - - - - - 0.786
68. BX510999.1 BX510999.1 412 1.588 0.756 0.832 - - - - - - -
69. kifc1 ENSDARG00000001558 6658 1.588 - - - - - 0.727 - - 0.861 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
70. DHX32 DHX32 181 1.587 - - - - 0.793 - - 0.794 -
71. cacna1ba ENSDARG00000021735 870 1.586 - - - - - 0.811 - - 0.775 calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
72. ppp2r2c ppp2r2c 441 1.584 - 0.797 - - - 0.787 - - -
73. fscn1a ENSDARG00000059680 3999 1.584 - - - - - - - 0.729 0.855 fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
74. scrt1a ENSDARG00000100821 2687 1.583 - - - - 0.718 - - 0.865 - scratch family zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-080219-30]
75. RLIM ENSDARG00000079306 514 1.579 - 0.788 - - - - - - 0.791 ring finger protein, LIM domain interacting [Source:ZFIN;Acc:ZDB-GENE-120809-2]
76. TAF2 ENSDARG00000102307 1401 1.579 - - - - - - - 0.764 0.815 TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
77. ephb3a ENSDARG00000031548 1872 1.578 - - - - - 0.706 - - 0.872 eph receptor B3a [Source:ZFIN;Acc:ZDB-GENE-990415-60]
78. CHD1 ENSDARG00000103787 1645 1.578 - - - - - - - 0.706 0.872 chromodomain helicase DNA binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7120]
79. SPOCK1 ENSDARG00000074644 794 1.575 - - - - - 0.821 - 0.754 - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
80. msi1 ENSDARG00000010710 2634 1.574 - - - - - 0.700 - - 0.874 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
81. PAX7 PAX7 1658 1.569 0.760 - - - - - - - 0.809
82. pcdh19 ENSDARG00000034344 2378 1.568 - - - - 0.735 0.833 - - - protocadherin 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4218]
83. CASK CASK 1750 1.568 - - - - - - - 0.734 0.834
84. rbfox3 rbfox3 1443 1.565 - - - - - 0.756 - - 0.809
85. clstn1 ENSDARG00000031720 5286 1.565 - - - - - 0.823 - - 0.742 calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
86. elavl3 ENSDARG00000014420 8644 1.564 - - - - - 0.809 - 0.755 - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
87. ralaa ENSDARG00000045463 792 1.561 - 0.743 - - - - 0.818 - - v-ral simian leukemia viral oncogene homolog Aa (ras related) [Source:ZFIN;Acc:ZDB-GENE-040426-1344]
88. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 1.555 - - - - - - 0.817 - 0.738 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
89. CHL1 CHL1 1553 1.555 - - - - - 0.817 - - 0.738
90. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.553 - - - - - 0.730 - - 0.823 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
91. fgf13b ENSDARG00000056633 455 1.553 - - - - - 0.790 0.763 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
92. mapk11 ENSDARG00000045836 846 1.552 0.736 - - - - 0.816 - - - mitogen-activated protein kinase 11 [Source:ZFIN;Acc:ZDB-GENE-040625-75]
93. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.551 - - - - - 0.725 - - 0.826 family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
94. WAPAL WAPAL 1888 1.551 - - - - - 0.728 0.823 - -
95. usp49 ENSDARG00000000229 706 1.55 - - - - - - - 0.709 0.841 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
96. gria3a ENSDARG00000032737 429 1.548 - - - - - 0.702 0.846 - - glutamate receptor, ionotropic, AMPA 3a [Source:ZFIN;Acc:ZDB-GENE-020125-5]
97. hnrnpm ENSDARG00000061735 19428 1.547 - - 0.822 - - - - - 0.725 heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
98. cdh10 cdh10 38 1.544 - - - - 0.789 - - 0.755 -
99. nr2f2 ENSDARG00000040926 5213 1.538 - - 0.773 - 0.765 - - - - nuclear receptor subfamily 2, group F, member 2 [Source:ZFIN;Acc:ZDB-GENE-990415-252]
100. CAMSAP3 ENSDARG00000059475 263 1.537 - - - - - 0.710 0.827 - - calmodulin regulated spectrin-associated protein family, member 3 [Source:ZFIN;Acc:ZDB-GENE-060503-811]

There are 1807 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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