Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for toporsb

Gene Name Gene ID Reads Annotation
toporsb ENSDARG00000105028 1898 topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]










Genes with expression patterns similar to toporsb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. toporsb ENSDARG00000105028 1898 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
2. smo ENSDARG00000002952 6411 1.976 - - 0.995 - 0.981 - - - - smoothened, frizzled class receptor [Source:ZFIN;Acc:ZDB-GENE-980526-89]
3. znf865 ENSDARG00000036698 15532 1.843 - - 0.956 - 0.887 - - - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
4. srsf3b ENSDARG00000059360 14888 1.827 - - 0.996 - 0.831 - - - - serine/arginine-rich splicing factor 3b [Source:ZFIN;Acc:ZDB-GENE-071005-2]
5. bloc1s3 ENSDARG00000068828 502 1.781 - 0.789 - - 0.992 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
6. usp16 ENSDARG00000060633 684 1.78 - - - - 0.990 - - - 0.790 ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
7. aspg ENSDARG00000052942 1406 1.754 - - - 0.762 0.992 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
8. arhgap1 ENSDARG00000024324 6904 1.743 - - 0.996 - - - 0.747 - - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]
9. si:ch73-257c13.2 ENSDARG00000074305 197 1.735 - - - 0.885 - - - - 0.850 si:ch73-257c13.2 [Source:ZFIN;Acc:ZDB-GENE-081104-269]
10. si:dkeyp-120h9.1 ENSDARG00000020278 3120 1.721 - 0.775 - - 0.946 - - - - si:dkeyp-120h9.1 [Source:ZFIN;Acc:ZDB-GENE-070705-534]
11. sulf2 sulf2 1286 1.714 - 0.732 - - 0.982 - - - -
12. pno1 ENSDARG00000008502 4547 1.713 - - - 0.803 0.910 - - - - partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
13. bdh1 ENSDARG00000059388 3390 1.706 - - 0.999 - - - - - 0.707 3-hydroxybutyrate dehydrogenase, type 1 [Source:ZFIN;Acc:ZDB-GENE-070410-130]
14. kera ENSDARG00000056938 2434 1.694 - - - 0.712 0.982 - - - - keratocan [Source:ZFIN;Acc:ZDB-GENE-041210-165]
15. si:rp71-1i20.2 ENSDARG00000043198 113 1.686 - - - 0.908 - - - - 0.778 si:rp71-1i20.2 [Source:ZFIN;Acc:ZDB-GENE-040724-207]
16. IP6K1 ENSDARG00000073744 524 1.649 - - - 0.935 - - 0.714 - - inositol hexakisphosphate kinase 1 [Source:ZFIN;Acc:ZDB-GENE-110317-2]
17. SORCS2 ENSDARG00000077465 185 1.645 0.795 - - - - - - - 0.850 sortilin-related VPS10 domain containing receptor 2 [Source:ZFIN;Acc:ZDB-GENE-130530-825]
18. RNPEPL1 ENSDARG00000007813 557 1.645 - 0.818 - - - - 0.827 - - arginyl aminopeptidase like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5522]
19. axin2 ENSDARG00000100149 4223 1.636 - 0.722 - - 0.914 - - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
20. ift88 ENSDARG00000027234, ENSDARG00000113909 168 1.631 - - - 0.877 - 0.754 - - - intraflagellar transport 88 homolog [Source:ZFIN;Acc:ZDB-GENE-030131-574]
21. zgc:113119 ENSDARG00000089142 281 1.629 - - - 0.857 - - 0.772 - - zgc:113119 [Source:ZFIN;Acc:ZDB-GENE-050327-3]
22. tbc1d12b ENSDARG00000073771 787 1.628 - - - 0.909 - - - - 0.719 TBC1 domain family, member 12b [Source:ZFIN;Acc:ZDB-GENE-121214-108]
23. pik3ip1 ENSDARG00000003281 339 1.621 - 0.794 - 0.827 - - - - - phosphoinositide-3-kinase interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-031030-14]
24. thap4 ENSDARG00000077323 434 1.598 - 0.772 - 0.826 - - - - - THAP domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-070912-5]
25. BX470189.1 ENSDARG00000067658 399 1.588 0.745 - - 0.843 - - - - - uncharacterized LOC100150296 [Source:NCBI gene;Acc:100150296]
26. CU633908.1 ENSDARG00000113928 222 1.574 - - - 0.750 - 0.824 - - - beta-1,3-glucuronyltransferase 1 (glucuronosyltransferase P) b [Source:NCBI gene;Acc:100332644]
27. CEP57 ENSDARG00000067668 345 1.551 0.753 - - - - - - - 0.798 centrosomal protein 57 [Source:ZFIN;Acc:ZDB-GENE-070112-522]
28. ZNF385D ENSDARG00000086162 202 1.543 - - - - - 0.732 - - 0.811 zinc finger protein 385D [Source:ZFIN;Acc:ZDB-GENE-130201-2]
29. Mar-09 Mar-09 126 1.528 - - - - - 0.723 - - 0.805
30. gnptg ENSDARG00000038566 259 1.521 - 0.725 - - - - - - 0.796 N-acetylglucosamine-1-phosphate transferase subunit gamma [Source:ZFIN;Acc:ZDB-GENE-040625-18]
31. pctp ENSDARG00000073985 405 1.505 - 0.778 - 0.727 - - - - - phosphatidylcholine transfer protein [Source:ZFIN;Acc:ZDB-GENE-081022-182]
32. WDR60 ENSDARG00000076934 326 1.504 - 0.718 - - - - - - 0.786 WD repeat domain 60 [Source:ZFIN;Acc:ZDB-GENE-140821-1]
33. fbxw4 ENSDARG00000033551 645 1.498 - 0.762 - - - - - - 0.736 F-box and WD repeat domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-000516-1]
34. rdh12 ENSDARG00000018069 396 1.473 - - - 0.707 - - - - 0.766 retinol dehydrogenase 12 [Source:ZFIN;Acc:ZDB-GENE-040718-9]
35. abcb11a ENSDARG00000011573 190 1.446 - 0.715 - - - - 0.731 - - ATP-binding cassette, sub-family B (MDR/TAP), member 11a [Source:ZFIN;Acc:ZDB-GENE-050517-13]
36. cerkl ENSDARG00000079397 218 1.432 - 0.710 - - - - - - 0.722 ceramide kinase-like [Source:ZFIN;Acc:ZDB-GENE-070410-38]
37. brms1lb ENSDARG00000018047 453 1.414 0.708 0.706 - - - - - - - BRMS1 like transcriptional repressor b [Source:ZFIN;Acc:ZDB-GENE-081031-54]
38. lamtor2 ENSDARG00000039872 3250 1 - - 1.000 - - - - - - late endosomal/lysosomal adaptor, MAPK and MTOR activator 2 [Source:ZFIN;Acc:ZDB-GENE-040801-63]
39. ik ENSDARG00000004161 3132 1 - - 1.000 - - - - - - IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
40. CABZ01029822.1 ENSDARG00000086931 1654 1 - - 1.000 - - - - - - uncharacterized LOC100004582 [Source:NCBI gene;Acc:100004582]
41. eif2ak3 ENSDARG00000062139 3276 1 - - 1.000 - - - - - - eukaryotic translation initiation factor 2-alpha kinase 3 [Source:ZFIN;Acc:ZDB-GENE-050414-2]
42. blzf1 ENSDARG00000011299 2568 1 - - 1.000 - - - - - - basic leucine zipper nuclear factor 1 [Source:ZFIN;Acc:ZDB-GENE-010724-1]
43. smarcal1 ENSDARG00000102265 1921 1 - - 1.000 - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a-like 1 [Source:ZFIN;Acc:ZDB-GENE-041210-303]
44. abi2a ENSDARG00000058207, ENSDARG00000111927 2574 1 - - 1.000 - - - - - - abl-interactor 2a [Source:ZFIN;Acc:ZDB-GENE-060929-192]
45. mpz ENSDARG00000038609 1740 1 - - 1.000 - - - - - - myelin protein zero [Source:ZFIN;Acc:ZDB-GENE-010724-4]
46. HPCAL1 ENSDARG00000022763 2885 1 - - 1.000 - - - - - - hippocalcin-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1242]
47. NSMCE2 ENSDARG00000076379 2133 1 - - 1.000 - - - - - - NSE2 (MMS21) homolog, SMC5-SMC6 complex SUMO ligase [Source:ZFIN;Acc:ZDB-GENE-081022-128]
48. si:dkey-177p2.6 ENSDARG00000042322 2783 1 - - 1.000 - - - - - - si:dkey-177p2.6 [Source:ZFIN;Acc:ZDB-GENE-030131-5926]
49. cops2 ENSDARG00000004785 4911 1 - - 1.000 - - - - - - COP9 signalosome subunit 2 [Source:ZFIN;Acc:ZDB-GENE-040625-15]
50. timmdc1 ENSDARG00000053466 2179 1 - - 1.000 - - - - - - translocase of inner mitochondrial membrane domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-369]
51. tfdp1b ENSDARG00000016304 3071 1 - - 1.000 - - - - - - transcription factor Dp-1, b [Source:ZFIN;Acc:ZDB-GENE-040426-1746]
52. pip5k1bb ENSDARG00000006508 2812 0.999 - - - - 0.999 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
53. commd4 ENSDARG00000061946 3281 0.999 - - 0.999 - - - - - - COMM domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-060929-600]
54. mrpl12 ENSDARG00000038768 5539 0.999 - - 0.999 - - - - - - mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
55. pdia3 ENSDARG00000102640 7239 0.999 - - 0.999 - - - - - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
56. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 0.999 - - 0.999 - - - - - - Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
57. glrx ENSDARG00000028106 16225 0.999 - - 0.999 - - - - - - glutaredoxin (thioltransferase) [Source:ZFIN;Acc:ZDB-GENE-041010-11]
58. ash2l ENSDARG00000060392 4916 0.999 - - 0.999 - - - - - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
59. mef2d ENSDARG00000040237 6144 0.998 - - 0.998 - - - - - - myocyte enhancer factor 2d [Source:ZFIN;Acc:ZDB-GENE-990415-164]
60. eif4ebp1 ENSDARG00000043608, ENSDARG00000113927 9982 0.998 - - 0.998 - - - - - - eukaryotic translation initiation factor 4E binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2332]
61. kazald2 ENSDARG00000078518 3062 0.998 - - 0.998 - - - - - - Kazal-type serine peptidase inhibitor domain 2 [Source:ZFIN;Acc:ZDB-GENE-070928-14]
62. fbn2b ENSDARG00000098237 10835 0.997 - - 0.997 - - - - - - fibrillin 2b [Source:ZFIN;Acc:ZDB-GENE-090112-3]
63. lgi1a ENSDARG00000020493 1218 0.997 - - - - 0.997 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
64. ccr10 ENSDARG00000040643 255 0.996 - - - - 0.996 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
65. ercc6 ENSDARG00000075612 1175 0.996 - - - - 0.996 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
66. pfkpb ENSDARG00000012801 223 0.996 - - - - 0.996 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
67. aurkb ENSDARG00000037640 4874 0.996 - - 0.996 - - - - - - aurora kinase B [Source:ZFIN;Acc:ZDB-GENE-020419-40]
68. dlx3b ENSDARG00000014626 3647 0.996 - - 0.996 - - - - - - distal-less homeobox 3b [Source:ZFIN;Acc:ZDB-GENE-980526-280]
69. myl2b ENSDARG00000053424 226 0.996 - - - - 0.996 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
70. ccdc28b ENSDARG00000011222 528 0.995 - - - - 0.995 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
71. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.995 - - - - 0.995 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
72. slc2a15b ENSDARG00000053269 899 0.995 - - - - 0.995 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
73. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.995 - - - - 0.995 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
74. dopey1 438 0.995 - - - - 0.995 - - - - dopey family member 1, transcript variant X4
75. fam193b ENSDARG00000102831 442 0.995 - - - - 0.995 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
76. FOXL2 239 0.995 - - - - 0.995 - - - - forkhead box L2, transcript variant X1
77. st8sia6 ENSDARG00000021195 2244 0.995 - - - - 0.995 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
78. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 0.995 - - 0.995 - - - - - - si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
79. nefma ENSDARG00000021351 790 0.995 - - - - 0.995 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
80. ube2e1 ENSDARG00000116649 10656 0.995 - - 0.995 - - - - - - ubiquitin-conjugating enzyme E2E 1 [Source:ZFIN;Acc:ZDB-GENE-071004-16]
81. atxn7l3 ENSDARG00000029331 531 0.994 - - - - 0.994 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
82. ago4 ENSDARG00000100854 496 0.994 - - - - 0.994 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
83. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.994 - - - - 0.994 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
84. gorab ENSDARG00000042031 483 0.994 - - - - 0.994 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
85. lig4 ENSDARG00000060620 369 0.994 - - - - 0.994 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
86. spag7 ENSDARG00000011555 3224 0.994 - - - - 0.994 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
87. med13b ENSDARG00000003910 1143 0.994 - - - - 0.994 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
88. cuedc2 ENSDARG00000039365 484 0.994 - - - - 0.994 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
89. BX005008.2 BX005008.2 708 0.993 - - - - 0.993 - - - -
90. TUSC5_1 TUSC5_1 320 0.993 - - - - 0.993 - - - -
91. tab1 ENSDARG00000036613 445 0.993 - - - - 0.993 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
92. CR759921.2 CR759921.2 583 0.993 - - - - 0.993 - - - -
93. smn1 ENSDARG00000018494 1024 0.992 - - - - 0.992 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
94. fut8 fut8 652 0.992 - - - - 0.992 - - - -
95. khdrbs1b ENSDARG00000070475 18157 0.992 - - 0.992 - - - - - - KH domain containing, RNA binding, signal transduction associated 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2344]
96. si:ch73-138n13.1 ENSDARG00000075349 4411 0.992 - - 0.992 - - - - - - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
97. SENP1 SENP1 1122 0.992 - - - - 0.992 - - - -
98. clu ENSDARG00000010434 498 0.992 - - - - 0.992 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
99. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.992 - - - - 0.992 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
100. atp2a2a ENSDARG00000029439 940 0.992 - - - - 0.992 - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 2a [Source:ZFIN;Acc:ZDB-GENE-040426-702]

There are 1094 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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