Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for topbp1

Gene Name Gene ID Reads Annotation
topbp1 ENSDARG00000059322 241 DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]










Genes with expression patterns similar to topbp1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. topbp1 ENSDARG00000059322 241 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase II binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060626-1]
2. zhx2 zhx2 365 1.807 - - 0.835 - - - - 0.972 -
3. zgc:110626 ENSDARG00000053159 1124 1.765 - 0.808 - - - - - 0.957 - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
4. NUDT12 ENSDARG00000100813 378 1.762 - - 0.786 - - - - 0.976 - nudix (nucleoside diphosphate linked moiety X)-type motif 12 [Source:ZFIN;Acc:ZDB-GENE-050417-164]
5. CABZ01066717.1 CABZ01066717.1 351 1.753 - - - - - - 0.768 0.985 -
6. glipr1b ENSDARG00000030078 73 1.736 - - - - - 0.759 - 0.977 - GLI pathogenesis-related 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1459]
7. gnat2 ENSDARG00000042529 112 1.735 - - - - - - 0.760 0.975 - guanine nucleotide binding protein (G protein), alpha transducing activity polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-011128-10]
8. ZBTB26 ENSDARG00000028949 129 1.689 - - - - - 0.710 - 0.979 - zinc finger and BTB domain containing 26 [Source:HGNC Symbol;Acc:HGNC:23383]
9. ZNF337_21 ZNF337_21 53 1.681 - 0.705 - - - - - 0.976 -
10. wnt8b ENSDARG00000006911 98 1.68 - 0.705 - - - - - 0.975 - wingless-type MMTV integration site family, member 8b [Source:ZFIN;Acc:ZDB-GENE-990415-279]
11. TMEM14A ENSDARG00000095157 611 1.679 - - - - - - 0.787 0.892 - transmembrane protein 14A [Source:HGNC Symbol;Acc:HGNC:21076]
12. si:dkey-30k6.5 ENSDARG00000057238 617 1.649 - 0.724 - - - - - 0.925 - si:dkey-30k6.5 [Source:ZFIN;Acc:ZDB-GENE-091204-299]
13. slc24a3 ENSDARG00000006760 418 1.648 - 0.732 - - - - - 0.916 - solute carrier family 24 (sodium/potassium/calcium exchanger), member 3 [Source:ZFIN;Acc:ZDB-GENE-090312-67]
14. PKN1 PKN1 42 1.629 - - - - 0.751 - 0.878 - -
15. nr2e1 ENSDARG00000017107 340 1.617 - - - - - 0.741 - 0.876 - nuclear receptor subfamily 2, group E, member 1 [Source:ZFIN;Acc:ZDB-GENE-040801-127]
16. arl13b ENSDARG00000012763 458 1.605 - - 0.700 - - - 0.905 - - ADP-ribosylation factor-like 13b [Source:ZFIN;Acc:ZDB-GENE-021217-3]
17. fyna ENSDARG00000011370 1679 1.593 - - - 0.715 - - - 0.878 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
18. aanat1 ENSDARG00000036567 176 1.589 - - 0.808 - - - 0.781 - - arylalkylamine N-acetyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040329-1]
19. rnf40 ENSDARG00000054201, ENSDARG00000114667 2440 1.571 - 0.762 - - - - - 0.809 - ring finger protein 40 [Source:ZFIN;Acc:ZDB-GENE-030131-6607]
20. CABZ01101003.1 CABZ01101003.1 858 1.549 - 0.780 0.769 - - - - - -
21. PLA2G4C_2 PLA2G4C_2 10 1.547 - - - - - 0.741 0.806 - -
22. nphp3 ENSDARG00000078261 110 1.547 - - - - 0.714 - 0.833 - - nephronophthisis 3 [Source:ZFIN;Acc:ZDB-GENE-091204-117]
23. kdm1a ENSDARG00000060679 6152 1.523 - - - 0.716 - - - 0.807 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
24. CU856359.1 CU856359.1 517 1.515 - 0.736 0.779 - - - - - -
25. HIST1H2BA_1 ENSDARG00000116654 37 1.511 - 0.705 - - - - 0.806 - - histone cluster 1 H2B family member a [Source:HGNC Symbol;Acc:HGNC:18730]
26. pcnxl3 pcnxl3 756 1.51 - - 0.753 - - - - 0.757 -
27. dennd3a ENSDARG00000078797 542 1.491 - - - - - - 0.765 0.726 - DENN/MADD domain containing 3a [Source:ZFIN;Acc:ZDB-GENE-091230-6]
28. C10H21orf91 C10H21orf91 644 1.491 - - - - - - 0.746 0.745 -
29. SNAPC2 ENSDARG00000036473 158 1.487 - 0.705 - - - 0.782 - - - small nuclear RNA activating complex, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-120328-2]
30. GPR4 ENSDARG00000079479 92 1.481 - 0.705 - - - - 0.776 - - G protein-coupled receptor 4 [Source:ZFIN;Acc:ZDB-GENE-101202-1]
31. tp53i11a ENSDARG00000069430 65 1.48 0.734 - - - - - 0.746 - - tumor protein p53 inducible protein 11a [Source:ZFIN;Acc:ZDB-GENE-050306-58]
32. unc5b ENSDARG00000033327 3432 1.467 - 0.752 - - - - - 0.715 - unc-5 netrin receptor B [Source:ZFIN;Acc:ZDB-GENE-041213-1]
33. LRRC61 ENSDARG00000077357 55 1.462 - 0.721 - - - 0.741 - - - leucine rich repeat containing 61 [Source:ZFIN;Acc:ZDB-GENE-060616-245]
34. riok2 ENSDARG00000035264, ENSDARG00000116349 613 1.454 0.710 - 0.744 - - - - - - RIO kinase 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-2913]
35. si:ch211-222k6.2 ENSDARG00000087046 144 1.452 - 0.726 - - 0.726 - - - - si:ch211-222k6.2 [Source:ZFIN;Acc:ZDB-GENE-030131-9038]
36. UBL7 UBL7 197 1.452 - 0.701 0.751 - - - - - -
37. si:ch211-188c16.1 ENSDARG00000077288 16 1.446 - 0.705 - - - 0.741 - - - si:ch211-188c16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-162]
38. FP074874.1 ENSDARG00000102679 40 1.424 - 0.705 - - - 0.719 - - - si:ch73-158p21.7 [Source:NCBI gene;Acc:100331388]
39. CABZ01100187.1 CABZ01100187.1 191 1.405 - 0.705 - - - - 0.700 - -
40. txndc11 ENSDARG00000101291 589 0.984 - - - - - - - 0.984 - thioredoxin domain containing 11 [Source:ZFIN;Acc:ZDB-GENE-041008-112]
41. WIZ WIZ 1188 0.983 - - - - - - - 0.983 -
42. ogfr ENSDARG00000037837 1001 0.983 - - - - - - - 0.983 - opioid growth factor receptor [Source:ZFIN;Acc:ZDB-GENE-030131-377]
43. lingo4b ENSDARG00000078527 235 0.981 - - - - - - - 0.981 - leucine rich repeat and Ig domain containing 4b [Source:ZFIN;Acc:ZDB-GENE-091214-3]
44. saal1 ENSDARG00000018681, ENSDARG00000109471 480 0.981 - - - - - - - 0.981 - serum amyloid A-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-725]
45. gtf3c3 ENSDARG00000043247 202 0.981 - - - - - - - 0.981 - general transcription factor IIIC, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-040914-80]
46. siae ENSDARG00000040527, ENSDARG00000111850 186 0.98 - - - - - - - 0.980 - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
47. cep135 ENSDARG00000002991 164 0.98 - - - - - - - 0.980 - centrosomal protein 135 [Source:ZFIN;Acc:ZDB-GENE-041210-325]
48. fra10ac1 ENSDARG00000102615 425 0.979 - - - - - - - 0.979 - FRA10A associated CGG repeat 1 [Source:ZFIN;Acc:ZDB-GENE-041010-95]
49. zdhhc3 zdhhc3 152 0.979 - - - - - - - 0.979 -
50. speg speg 334 0.979 - - - - - - - 0.979 -
51. si:dkey-15h14.4 si:dkey-15h14.4 118 0.979 - - - - - - - 0.979 -
52. XXYLT1 ENSDARG00000088799 193 0.978 - - - - - - - 0.978 - xyloside xylosyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-120521-2]
53. obfc1 obfc1 156 0.978 - - - - - - - 0.978 -
54. il21r il21r 74 0.978 - - - - - - - 0.978 -
55. st6galnac1.2 ENSDARG00000043816 51 0.978 - - - - - - - 0.978 - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase 1, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-041014-161]
56. syt5b ENSDARG00000011640 70 0.978 - - - - - - - 0.978 - synaptotagmin Vb [Source:ZFIN;Acc:ZDB-GENE-050522-134]
57. CABZ01027547.1 CABZ01027547.1 128 0.978 - - - - - - - 0.978 -
58. ENSDARG00000089986 ENSDARG00000089986 308 0.978 - - - - - - - 0.978 -
59. GRIK3 ENSDARG00000077715 178 0.978 - - - - - - - 0.978 - glutamate ionotropic receptor kainate type subunit 3 [Source:HGNC Symbol;Acc:HGNC:4581]
60. celsr1b ENSDARG00000058259 1219 0.977 - - - - - - - 0.977 - cadherin EGF LAG seven-pass G-type receptor 1b [Source:ZFIN;Acc:ZDB-GENE-050823-4]
61. gtf3c2 ENSDARG00000004574 153 0.977 - - - - - - - 0.977 - general transcription factor IIIC, polypeptide 2, beta [Source:ZFIN;Acc:ZDB-GENE-041014-349]
62. si:ch211-76l23.6 si:ch211-76l23.6 68 0.977 - - - - - - - 0.977 -
63. gucy1b3 92 0.977 - - - - - - - 0.977 - guanylate cyclase 1, soluble, beta 3
64. lrit2 ENSDARG00000030626 69 0.977 - - - - - - - 0.977 - leucine-rich repeat, immunoglobulin-like and transmembrane domains 2 [Source:ZFIN;Acc:ZDB-GENE-050522-160]
65. ftr29 ENSDARG00000075355 172 0.977 - - - - - - - 0.977 - finTRIM family, member 29 [Source:ZFIN;Acc:ZDB-GENE-050417-159]
66. adcy1b ENSDARG00000088634 44 0.977 - - - - - - - 0.977 - adenylate cyclase 1b [Source:ZFIN;Acc:ZDB-GENE-100805-1]
67. cabp2b ENSDARG00000052277 119 0.977 - - - - - - - 0.977 - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
68. rgs9bp ENSDARG00000009466 41 0.976 - - - - - - - 0.976 - regulator of G protein signaling 9 binding protein [Source:ZFIN;Acc:ZDB-GENE-030728-1]
69. gpr37l1a ENSDARG00000006079 422 0.976 - - - - - - - 0.976 - G protein-coupled receptor 37 like 1a [Source:ZFIN;Acc:ZDB-GENE-110411-20]
70. gpr84 ENSDARG00000077308, ENSDARG00000111475 93 0.976 - - - - - - - 0.976 - G protein-coupled receptor 84 [Source:ZFIN;Acc:ZDB-GENE-070928-33]
71. ppil4 ENSDARG00000043854, ENSDARG00000114623 858 0.976 - - - - - - - 0.976 - peptidylprolyl isomerase (cyclophilin)-like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6251]
72. CR942805.1 CR942805.1 94 0.976 - - - - - - - 0.976 -
73. si:ch211-57i17.2 ENSDARG00000093354 58 0.976 - - - - - - - 0.976 - si:ch211-57i17.2 [Source:ZFIN;Acc:ZDB-GENE-041014-258]
74. FBXO48 ENSDARG00000086184 110 0.976 - - - - - - - 0.976 - F-box protein 48 [Source:HGNC Symbol;Acc:HGNC:33857]
75. smoc2 ENSDARG00000088157 646 0.975 - - - - - - - 0.975 - SPARC related modular calcium binding 2 [Source:ZFIN;Acc:ZDB-GENE-021031-5]
76. NFKBIB ENSDARG00000030087, ENSDARG00000109444 306 0.975 - - - - - - - 0.975 - nuclear factor of kappa light polypeptide gene enhancer in B-cells inhibitor, beta [Source:ZFIN;Acc:ZDB-GENE-070705-529]
77. CABZ01073174.1 CABZ01073174.1 581 0.975 - - - - - - - 0.975 -
78. ENGASE ENSDARG00000010035 232 0.975 - - - - - - - 0.975 - endo-beta-N-acetylglucosaminidase [Source:ZFIN;Acc:ZDB-GENE-070112-1332]
79. fam86a fam86a 174 0.974 - - - - - - - 0.974 -
80. CEP57 ENSDARG00000067668 345 0.974 - - - - - - - 0.974 - centrosomal protein 57 [Source:ZFIN;Acc:ZDB-GENE-070112-522]
81. dna2 ENSDARG00000078759 846 0.974 - - - - - - - 0.974 - DNA replication helicase/nuclease 2 [Source:ZFIN;Acc:ZDB-GENE-090313-71]
82. slc25a40 ENSDARG00000015856 359 0.974 - - - - - - - 0.974 - solute carrier family 25, member 40 [Source:ZFIN;Acc:ZDB-GENE-040718-52]
83. lnx2b ENSDARG00000071478 654 0.974 - - - - - - - 0.974 - ligand of numb-protein X 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2500]
84. sec22c ENSDARG00000063387 203 0.974 - - - - - - - 0.974 - SEC22 homolog C, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060227-2]
85. btr04 ENSDARG00000060962, ENSDARG00000095113 281 0.973 - - - - - - - 0.973 - bloodthirsty-related gene family, member 4 [Source:ZFIN;Acc:ZDB-GENE-060825-109]
86. tgs1 190 0.973 - - - - - - - 0.973 - trimethylguanosine synthase 1, transcript variant X1
87. E2F2 E2F2 871 0.973 - - - - - - - 0.973 -
88. exd3 ENSDARG00000063140 119 0.973 - - - - - - - 0.973 - exonuclease 3'-5' domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-091204-349]
89. fabp7b ENSDARG00000034650 397 0.973 - - - - - - - 0.973 - fatty acid binding protein 7, brain, b [Source:ZFIN;Acc:ZDB-GENE-040614-4]
90. dnase2 ENSDARG00000073893 141 0.973 - - - - - - - 0.973 - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
91. slc35b1_1 ENSDARG00000038213 194 0.973 - - - - - - - 0.973 - solute carrier family 35, member B1 [Source:ZFIN;Acc:ZDB-GENE-040912-148]
92. CR954963.1 ENSDARG00000097153 1135 0.973 - - - - - - - 0.973 -
93. BX324131.3 BX324131.3 278 0.972 - - - - - - - 0.972 -
94. cplx4c ENSDARG00000094889 253 0.972 - - - - - - - 0.972 - complexin 4c [Source:ZFIN;Acc:ZDB-GENE-101018-1]
95. vhl ENSDARG00000070617 663 0.972 - - - - - - - 0.972 - von Hippel-Lindau tumor suppressor [Source:ZFIN;Acc:ZDB-GENE-070112-1042]
96. CABZ01066957.1 CABZ01066957.1 161 0.972 - - - - - - - 0.972 -
97. scrn2 ENSDARG00000043497 204 0.972 - - - - - - - 0.972 - secernin 2 [Source:ZFIN;Acc:ZDB-GENE-040724-75]
98. draxin ENSDARG00000058256, ENSDARG00000111676 266 0.972 - - - - - - - 0.972 - dorsal inhibitory axon guidance protein [Source:ZFIN;Acc:ZDB-GENE-050913-20]
99. fam173a ENSDARG00000041223, ENSDARG00000113102 639 0.972 - - - - - - - 0.972 - family with sequence similarity 173, member A [Source:ZFIN;Acc:ZDB-GENE-040625-59]
100. inaa ENSDARG00000011862 115 0.972 - - - - - - - 0.972 - internexin neuronal intermediate filament protein, alpha a [Source:ZFIN;Acc:ZDB-GENE-060531-65]

There are 1398 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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