Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top3b

Gene Name Gene ID Reads Annotation
top3b ENSDARG00000027586 8 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]










Genes with expression patterns similar to top3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3b ENSDARG00000027586 8 6 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
2. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
3. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
4. PLEKHS1_2 PLEKHS1_2 21 2 - - - - 1.000 - 1.000 - -
5. IQGAP3 ENSDARG00000098650 5 2 - - - - 1.000 - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
6. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
7. si:ch211-220b11.4 si:ch211-220b11.4 8 1.916 - - - - 0.916 1.000 - - -
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.914 - - - 1.000 - - 0.914 - -
9. KCNK17 ENSDARG00000105453 16 1.861 - - - - - 0.861 - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
10. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
11. GM2A ENSDARG00000088439 55 1.845 - - - 1.000 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
12. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
13. si:ch211-233h19.2 ENSDARG00000042213 47 1.785 - - - 0.785 - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
14. CU104716.2 CU104716.2 10 1.781 - - - - 0.781 - 1.000 - -
15. TMBIM1 TMBIM1 2 1.772 - - - - - 1.000 - - 0.772
16. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - - 1.000 - -
17. si:ch73-248e21.5 ENSDARG00000088283 19 1.723 - - - - - - 1.000 - 0.723 si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
18. gsto1 ENSDARG00000022183 13 1.72 - - - - 0.962 - 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
19. avpr2aa ENSDARG00000007436 43 1.713 - - - 0.713 - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
20. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
21. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
22. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
23. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.57 - - - - 0.750 - 0.820 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
24. rag1 ENSDARG00000052122 13 1.486 - - 0.712 - - - - - 0.774 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
25. si:ch211-197n1.2 58 1.476 - - - - - - 0.750 - 0.726 si:ch211-197n1.2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 1.446 - - - 0.709 - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. nanog ENSDARG00000075113 10 1 - - - - - - 1.000 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
28. CABZ01041769.3 CABZ01041769.3 5 1 - - - - - 1.000 - - -
29. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
30. slc5a1 ENSDARG00000013871 4 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
31. TMEM55B TMEM55B 76 1 - - - - - 1.000 - - -
32. CABZ01002626.1 CABZ01002626.1 29 1 - - - - - - 1.000 - -
33. TRPC7 TRPC7 1 1 - - - 1.000 - - - - -
34. ifit2 ifit2 11 1 - - - - - 1.000 - - -
35. U1_24 U1_24 0 1 - - - 1.000 - - - - -
36. CT583626.2 CT583626.2 53 1 - - - - - 1.000 - - -
37. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
38. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
39. CR388132.1 ENSDARG00000097728 61 1 - - - - - 1.000 - - -
40. CR450840.2 CR450840.2 1 1 - - - 1.000 - - - - -
41. traf1 ENSDARG00000069482 50 1 - - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
42. BX649431.1 ENSDARG00000098522 13 1 - - - - 1.000 - - - -
43. CR457462.1 CR457462.1 11 1 - - - - 1.000 - - - -
44. irx4a ENSDARG00000035648 71 1 - - - - - - 1.000 - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
45. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
46. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1 - - - 1.000 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
47. SPDEF ENSDARG00000029930 60 1 - - - - - - 1.000 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
48. htra3a ENSDARG00000052895 28 1 - - - 1.000 - - - - - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
49. si:dkey-261l7.2 ENSDARG00000094345 51 1 - - - - - - 1.000 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
50. BX470196.1 BX470196.1 9 1 - - - 1.000 - - - - -
51. CR854891.1 CR854891.1 7 1 - - - - - - 1.000 - -
52. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
53. TRIM8 TRIM8 5 1 - - - - - - 1.000 - -
54. CR855327.1 CR855327.1 6 1 - - - - - 1.000 - - -
55. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 1 - - - - - - 1.000 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
56. CECR6 25 1 - - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
57. SGSM1_1 SGSM1_1 40 1 - - - 1.000 - - - - -
58. fkbp6 ENSDARG00000030133, ENSDARG00000099077 6 1 - - - - 1.000 - - - - FK506 binding protein 6 [Source:NCBI gene;Acc:402839]
59. slc6a1l ENSDARG00000041205 1 1 - - - - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter, GABA), member 1, like [Source:ZFIN;Acc:ZDB-GENE-041210-296]
60. slc35f3a ENSDARG00000075909 1 1 - - - - - 1.000 - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
61. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
62. si:ch73-249k16.1 si:ch73-249k16.1 36 1 - - - - - 1.000 - - -
63. rimbp2 ENSDARG00000001154, ENSDARG00000093752 1 1 - - - - - - - - 1.000 RIMS binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-040724-96]
64. zgc:158260_1 ENSDARG00000101703 0 1 - - - - - 1.000 - - - zgc:158260 [Source:ZFIN;Acc:ZDB-GENE-061201-24]
65. cx55.5 13 1 - - - - - - 1.000 - - connexin 55.5, transcript variant X1
66. si:ch73-373m9.1 si:ch73-373m9.1 0 1 - - - - - - - - 1.000
67. ATP13A5 ATP13A5 13 1 - - - - - - 1.000 - -
68. EFEMP1_1 EFEMP1_1 8 1 - - - - - 1.000 - - -
69. CABZ01080550.1 ENSDARG00000100621 3 1 - - - - - - 1.000 - -
70. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - 1.000 - - - -
71. pkhd1l1 ENSDARG00000091116 23 1 - - - - - - 1.000 - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
72. gcnt3 ENSDARG00000060471 37 1 - - - - - - 1.000 - - glucosaminyl (N-acetyl) transferase 3, mucin type [Source:ZFIN;Acc:ZDB-GENE-110411-253]
73. igl2c1 igl2c1 0 1 - - - - - - - - 1.000
74. si:dkey-150h13.1 si:dkey-150h13.1 1 1 - - - - - - 1.000 - -
75. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
76. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - 1.000 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
77. si:dkeyp-52c3.1 3 1 - - - 1.000 - - - - - si:dkeyp-52c3.1, transcript variant X1
78. bard1 ENSDARG00000076733 40 1 - - - 1.000 - - - - - BRCA1 associated RING domain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5883]
79. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
80. cart1 ENSDARG00000070930 46 1 - - - - - - 1.000 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
81. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
82. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - 1.000 - -
83. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 - - - - 1.000 - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
84. frmd7 ENSDARG00000068958 1 1 - - - - - - - - 1.000 FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
85. SIKE1 2 1 - - - - - - 1.000 - - suppressor of IKBKE 1, transcript variant X3
86. si:ch211-119c24.2 si:ch211-119c24.2 0 1 - - - - - - - - 1.000
87. CU468142.1 CU468142.1 6 1 - - - 1.000 - - - - -
88. SRCRB4D SRCRB4D 4 1 - - - - - 1.000 - - -
89. si:ch211-113a14.26_3 6 1 - - - - - - - - 1.000 si:ch211-113a14.26
90. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - - - 1.000
91. CU672227.1 ENSDARG00000105807 15 1 - - - - - - 1.000 - -
92. fibcd1 ENSDARG00000060393, ENSDARG00000109954 0 1 - - - - - - - - 1.000 fibrinogen C domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-070424-245]
93. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
94. si:dkey-189d19.1 si:dkey-189d19.1 2 1 - - - - 1.000 - - - -
95. zgc:174704 10 1 - - - - - 1.000 - - - zgc:174704, transcript variant X2
96. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
97. EXD1 ENSDARG00000098669 27 1 - - - 1.000 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
98. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
99. BX465203.1 ENSDARG00000113985 8 1 - - - 1.000 - - - - -
100. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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