Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top3b

Gene Name Gene ID Reads Annotation
top3b ENSDARG00000027586 8 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]










Genes with expression patterns similar to top3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3b ENSDARG00000027586 8 6 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
2. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
3. PLEKHS1_2 PLEKHS1_2 21 2 - - - - 1.000 - 1.000 - -
4. IQGAP3 ENSDARG00000098650 5 2 - - - - 1.000 - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
5. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
6. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
7. si:ch211-220b11.4 si:ch211-220b11.4 8 1.916 - - - - 0.916 1.000 - - -
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.914 - - - 1.000 - - 0.914 - -
9. KCNK17 ENSDARG00000105453 16 1.861 - - - - - 0.861 - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
10. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
11. GM2A ENSDARG00000088439 55 1.845 - - - 1.000 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
12. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
13. si:ch211-233h19.2 ENSDARG00000042213 47 1.785 - - - 0.785 - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
14. CU104716.2 CU104716.2 10 1.781 - - - - 0.781 - 1.000 - -
15. TMBIM1 TMBIM1 2 1.772 - - - - - 1.000 - - 0.772
16. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - - 1.000 - -
17. si:ch73-248e21.5 ENSDARG00000088283 19 1.723 - - - - - - 1.000 - 0.723 si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
18. gsto1 ENSDARG00000022183 13 1.72 - - - - 0.962 - 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
19. avpr2aa ENSDARG00000007436 43 1.713 - - - 0.713 - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
20. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
21. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
22. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
23. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.57 - - - - 0.750 - 0.820 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
24. rag1 ENSDARG00000052122 13 1.486 - - 0.712 - - - - - 0.774 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
25. si:ch211-197n1.2 58 1.476 - - - - - - 0.750 - 0.726 si:ch211-197n1.2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 1.446 - - - 0.709 - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. zp2.5 ENSDARG00000086522 15 1 - - - - - - 1.000 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
28. mtus2 mtus2 22 1 - - - - - - 1.000 - -
29. inpp5k inpp5k 2 1 - - - 1.000 - - - - -
30. TRIM8 TRIM8 5 1 - - - - - - 1.000 - -
31. CACNA2D1 ENSDARG00000073752 6 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
32. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
33. dbpa ENSDARG00000063014 107 1 - - - - - - 1.000 - - D site albumin promoter binding protein a [Source:ZFIN;Acc:ZDB-GENE-060503-802]
34. C25H12orf29 C25H12orf29 31 1 - - - - - - 1.000 - -
35. BX537305.1 ENSDARG00000113834 10 1 - - - - - - 1.000 - -
36. zak_1 ENSDARG00000006978, ENSDARG00000044615 7 1 - - - - - 1.000 - - - sterile alpha motif and leucine zipper containing kinase AZK [Source:ZFIN;Acc:ZDB-GENE-070912-386]
37. si:ch211-198o19.2 si:ch211-198o19.2 0 1 - - - 1.000 - - - - -
38. CHD6 ENSDARG00000017244 219 1 - - - - - 1.000 - - - chromodomain helicase DNA binding protein 6 [Source:ZFIN;Acc:ZDB-GENE-130530-559]
39. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
40. CABZ01002626.1 CABZ01002626.1 29 1 - - - - - - 1.000 - -
41. rnf217 ENSDARG00000060944 10 1 - - - - 1.000 - - - - ring finger protein 217 [Source:ZFIN;Acc:ZDB-GENE-060503-400]
42. si:dkey-94f20.4 ENSDARG00000016923 2 1 - - - - - 1.000 - - - si:dkey-94f20.4 [Source:ZFIN;Acc:ZDB-GENE-121214-276]
43. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
44. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
45. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - - - - - - 1.000 - -
46. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 1 - - - - - - 1.000 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
47. CCDC88A_1 CCDC88A_1 12 1 - - - - - 1.000 - - -
48. CR450840.2 CR450840.2 1 1 - - - 1.000 - - - - -
49. FAM188B2 4 1 - - - - - 1.000 - - - family with sequence similarity 188, member B2
50. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - 1.000 - -
51. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - - - 1.000 - - -
52. si:ch211-119c24.2 si:ch211-119c24.2 0 1 - - - - - - - - 1.000
53. GRINA GRINA 12 1 - - - - - - 1.000 - -
54. U1_1 U1_1 0 1 - - - 1.000 - - - - -
55. BX470196.1 BX470196.1 9 1 - - - 1.000 - - - - -
56. CECR6 25 1 - - - - - - 1.000 - - cat eye syndrome chromosome region, candidate 6
57. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
58. ppp2r3a ENSDARG00000077722 7 1 - - - - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
59. si:ch211-161n3.5 ENSDARG00000095981 1 1 - - - - - 1.000 - - - si:ch211-161n3.5 [Source:ZFIN;Acc:ZDB-GENE-110913-81]
60. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
61. SNORD88 SNORD88 232 1 - - - - - 1.000 - - -
62. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
63. wdr27 ENSDARG00000053386 2 1 - - - - - 1.000 - - - WD repeat domain 27 [Source:ZFIN;Acc:ZDB-GENE-051120-93]
64. CU183952.2 CU183952.2 6 1 - - - - - 1.000 - - -
65. FRMD7 ENSDARG00000068958 17 1 - - - - - - 1.000 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
66. U1_43 U1_43 0 1 - - - 1.000 - - - - -
67. TMEM55B TMEM55B 76 1 - - - - - 1.000 - - -
68. bend5 ENSDARG00000075624 10 1 - - - 1.000 - - - - - BEN domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-081104-460]
69. MFAP4_6 MFAP4_6 162 1 - - - - - 1.000 - - -
70. CR457462.1 CR457462.1 11 1 - - - - 1.000 - - - -
71. or133-1 ENSDARG00000056911 1 1 - - - - - - - - 1.000 odorant receptor, family H, subfamily 133, member 1 [Source:ZFIN;Acc:ZDB-GENE-070806-34]
72. sobpa ENSDARG00000054253 0 1 - - - - - - - - 1.000 sine oculis binding protein homolog (Drosophila) a [Source:ZFIN;Acc:ZDB-GENE-090313-313]
73. sh2d1aa ENSDARG00000095348 4 1 - - - - - - 1.000 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
74. or112-1 ENSDARG00000077211 2 1 - - - - - - - - 1.000 odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
75. si:ch211-218m3.16 ENSDARG00000044336 33 1 - - - - - - 1.000 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
76. irgq2 ENSDARG00000068657 4 1 - - - - - - 1.000 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
77. si:ch211-12e1.5 si:ch211-12e1.5 14 1 - - - - - - 1.000 - -
78. SLC16A1 SLC16A1 37 1 - - - - - 1.000 - - -
79. cabp7b ENSDARG00000060846 5 1 - - - - - 1.000 - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
80. CU633857.1 ENSDARG00000115315 21 1 - - - - - - 1.000 - - multiciliate differentiation and DNA synthesis associated cell cycle protein [Source:NCBI gene;Acc:100537904]
81. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - - - 1.000 - - -
82. si:dkey-122c11.1 ENSDARG00000093747 19 1 - - - - - - 1.000 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
83. si:ch73-21k16.5 ENSDARG00000078770 7 1 - - - 1.000 - - - - - si:ch73-21k16.5 [Source:ZFIN;Acc:ZDB-GENE-030131-8374]
84. zmat4a ENSDARG00000092987, ENSDARG00000111611 1 1 - - - - 1.000 - - - - zinc finger, matrin-type 4a [Source:ZFIN;Acc:ZDB-GENE-081104-333]
85. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
86. CLNK 8 1 - - - - - - 1.000 - - cytokine dependent hematopoietic cell linker
87. si:dkey-219e20.3 si:dkey-219e20.3 1 1 - - - - - 1.000 - - -
88. si:ch211-283l16.1 ENSDARG00000112586 131 1 - - - - - - 1.000 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
89. ighv14-1 ENSDARG00000096418 17 1 - - - 1.000 - - - - - immunoglobulin heavy variable 14-1 [Source:ZFIN;Acc:ZDB-GENE-040514-42]
90. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
91. BX465203.1 ENSDARG00000113985 8 1 - - - 1.000 - - - - -
92. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
93. CMA1_9 CMA1_9 1 1 - - - - 1.000 - - - -
94. EP400 ENSDARG00000100965 45 1 - - - - - - 1.000 - - E1A binding protein p400 [Source:ZFIN;Acc:ZDB-GENE-081104-186]
95. cplx3a ENSDARG00000062508, ENSDARG00000099196, ENSDARG00000112735 58 1 - - - - - 1.000 - - - complexin 3a [Source:ZFIN;Acc:ZDB-GENE-090313-349]
96. CR854891.1 CR854891.1 7 1 - - - - - - 1.000 - -
97. si:dkey-202i12.5 si:dkey-202i12.5 20 1 - - - - - 1.000 - - -
98. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - 1.000 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
99. si:ch73-77n15.1 si:ch73-77n15.1 2 1 - - - - - - 1.000 - -
100. BX005421.6 BX005421.6 4 1 - - - 1.000 - - - - -

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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