Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top3b

Gene Name Gene ID Reads Annotation
top3b ENSDARG00000027586 8 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]










Genes with expression patterns similar to top3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3b ENSDARG00000027586 8 6 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
2. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
3. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
4. PLEKHS1_2 PLEKHS1_2 21 2 - - - - 1.000 - 1.000 - -
5. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
6. IQGAP3 ENSDARG00000098650 5 2 - - - - 1.000 - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
7. si:ch211-220b11.4 si:ch211-220b11.4 8 1.916 - - - - 0.916 1.000 - - -
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.914 - - - 1.000 - - 0.914 - -
9. KCNK17 ENSDARG00000105453 16 1.861 - - - - - 0.861 - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
10. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
11. GM2A ENSDARG00000088439 55 1.845 - - - 1.000 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
12. si:ch211-233h19.2 ENSDARG00000042213 47 1.785 - - - 0.785 - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
13. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
14. CU104716.2 CU104716.2 10 1.781 - - - - 0.781 - 1.000 - -
15. TMBIM1 TMBIM1 2 1.772 - - - - - 1.000 - - 0.772
16. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - - 1.000 - -
17. si:ch73-248e21.5 ENSDARG00000088283 19 1.723 - - - - - - 1.000 - 0.723 si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
18. gsto1 ENSDARG00000022183 13 1.72 - - - - 0.962 - 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
19. avpr2aa ENSDARG00000007436 43 1.713 - - - 0.713 - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
20. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
21. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
22. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
23. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.57 - - - - 0.750 - 0.820 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
24. rag1 ENSDARG00000052122 13 1.486 - - 0.712 - - - - - 0.774 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
25. si:ch211-197n1.2 58 1.476 - - - - - - 0.750 - 0.726 si:ch211-197n1.2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 1.446 - - - 0.709 - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. VASH1 ENSDARG00000092716 33 1 - - - - - 1.000 - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
28. MFAP4_6 MFAP4_6 162 1 - - - - - 1.000 - - -
29. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
30. serpinf2a ENSDARG00000076448 4 1 - - - - - - - - 1.000 serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 2a [Source:ZFIN;Acc:ZDB-GENE-060822-1]
31. nitr3a_1 ENSDARG00000110676 44 1 - - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
32. zgc:152938 ENSDARG00000102586 97 1 - - - - - - 1.000 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
33. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
34. si:dkey-148e22.3 si:dkey-148e22.3 4 1 - - - - - - 1.000 - -
35. CCL19 CCL19 6 1 - - - - - 1.000 - - -
36. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
37. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
38. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
39. vtg3 ENSDARG00000016448 8 1 - - - 1.000 - - - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
40. TRPC4 TRPC4 18 1 - - - - - - - - 1.000
41. CABZ01016604.1 CABZ01016604.1 12 1 - - - 1.000 - - - - -
42. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
43. CR533575.1 CR533575.1 0 1 - - - - - 1.000 - - -
44. si:dkey-208k4.10 si:dkey-208k4.10 1 1 - - - - - - - - 1.000
45. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - - - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
46. U1_27 U1_27 0 1 - - - 1.000 - - - - -
47. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - - - 1.000 - - -
48. MMP20 MMP20 1 1 - - - - - - 1.000 - -
49. si:ch1073-181h11.2 ENSDARG00000103883 24 1 - - - - - - 1.000 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
50. XKR8 XKR8 9 1 - - - - - - 1.000 - -
51. tipin ENSDARG00000036136, ENSDARG00000110772 3 1 - - - - - - - - 1.000 timeless interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-189]
52. si:ch211-14a17.7 ENSDARG00000038720, ENSDARG00000115206 1 1 - - - 1.000 - - - - - si:ch211-14a17.7 [Source:ZFIN;Acc:ZDB-GENE-030616-590]
53. CCDC88A_1 CCDC88A_1 12 1 - - - - - 1.000 - - -
54. mxg ENSDARG00000008019 4 1 - - - - - - - - 1.000 myxovirus (influenza virus) resistance G [Source:ZFIN;Acc:ZDB-GENE-030721-10]
55. GALNTL6 ENSDARG00000040048 33 1 - - - - - - 1.000 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
56. si:ch73-373m9.1 si:ch73-373m9.1 0 1 - - - - - - - - 1.000
57. BX323836.1 BX323836.1 1 1 - - - - - - 1.000 - -
58. BX465203.1 ENSDARG00000113985 8 1 - - - 1.000 - - - - -
59. EFEMP1_1 EFEMP1_1 8 1 - - - - - 1.000 - - -
60. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
61. tmem86a ENSDARG00000044034 1 1 - - - - - 1.000 - - - transmembrane protein 86A [Source:ZFIN;Acc:ZDB-GENE-050320-81]
62. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1 - - - - - 1.000 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
63. or112-1 ENSDARG00000077211 2 1 - - - - - - - - 1.000 odorant receptor, family A, subfamily 112, member 1 [Source:ZFIN;Acc:ZDB-GENE-990415-195]
64. PRKD2_1 PRKD2_1 1 1 - - - - - 1.000 - - -
65. si:ch211-239f4.6 ENSDARG00000093347 2 1 - - - - - - 1.000 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
66. picalml picalml 0 1 - - - - - - - - 1.000
67. ppp2r3a ENSDARG00000077722 7 1 - - - - - - 1.000 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
68. SEMA6B SEMA6B 35 1 - - - - - - 1.000 - -
69. sobpa ENSDARG00000054253 0 1 - - - - - - - - 1.000 sine oculis binding protein homolog (Drosophila) a [Source:ZFIN;Acc:ZDB-GENE-090313-313]
70. BX470196.1 BX470196.1 9 1 - - - 1.000 - - - - -
71. cx55.5 13 1 - - - - - - 1.000 - - connexin 55.5, transcript variant X1
72. gabrr2b ENSDARG00000014057 9 1 - - - - - - 1.000 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
73. U1_38 U1_38 1 1 - - - - - - 1.000 - -
74. ampd2 ampd2 6 1 - - - - - - - - 1.000
75. si:dkey-41e15.4 si:dkey-41e15.4 1 1 - - - - - - 1.000 - -
76. slc6a1l ENSDARG00000041205 1 1 - - - - - - - - 1.000 solute carrier family 6 (neurotransmitter transporter, GABA), member 1, like [Source:ZFIN;Acc:ZDB-GENE-041210-296]
77. panx2 ENSDARG00000063019 3 1 - - - - - - - - 1.000 pannexin 2 [Source:ZFIN;Acc:ZDB-GENE-050419-55]
78. col10a1 col10a1 19 1 - - - - 1.000 - - - -
79. si:ch211-10j20.7 si:ch211-10j20.7 8 1 - - - - - - 1.000 - -
80. LRRC69 LRRC69 1 1 - - - - - - 1.000 - -
81. si:ch211-10j20.1 si:ch211-10j20.1 24 1 - - - - - 1.000 - - -
82. si:dkey-88n24.8 ENSDARG00000091095 9 1 - - - - - 1.000 - - - si:dkey-88n24.8 [Source:ZFIN;Acc:ZDB-GENE-041014-92]
83. U1_24 U1_24 0 1 - - - 1.000 - - - - -
84. pnp4b ENSDARG00000029230 6 1 - - - - 1.000 - - - - purine nucleoside phosphorylase 4b [Source:ZFIN;Acc:ZDB-GENE-040426-1887]
85. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
86. CACNA2D1 ENSDARG00000073752 6 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
87. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 1 - - - - - - 1.000 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
88. si:ch211-234c11.3_1 ENSDARG00000093615 10 1 - - - - - - 1.000 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
89. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 1 - - - - - - 1.000 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
90. zgc:55621 ENSDARG00000010782 3 1 - - - - - - - - 1.000 zgc:55621 [Source:ZFIN;Acc:ZDB-GENE-040426-762]
91. pigr ENSDARG00000101890 10 1 - - - - - - 1.000 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
92. arhgap23b ENSDARG00000026840 6 1 - - - 1.000 - - - - - Rho GTPase activating protein 23b [Source:ZFIN;Acc:ZDB-GENE-081031-78]
93. si:dkey-111b14.1 si:dkey-111b14.1 3 1 - - - 1.000 - - - - -
94. adipoqb ENSDARG00000100086 5 1 - - - - - 1.000 - - - adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
95. si:dkey-163m14.6 5 1 - - - - 1.000 - - - - si:dkey-163m14.6
96. SRCRB4D SRCRB4D 4 1 - - - - - 1.000 - - -
97. traf1 ENSDARG00000069482 50 1 - - - - - - 1.000 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
98. ciita ENSDARG00000090851 5 1 - - - - 1.000 - - - - class II, major histocompatibility complex, transactivator [Source:ZFIN;Acc:ZDB-GENE-071116-6]
99. zgc:114037_5 6 1 - - - 1.000 - - - - - zgc:114037
100. CU183952.2 CU183952.2 6 1 - - - - - 1.000 - - -

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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