Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top3b

Gene Name Gene ID Reads Annotation
top3b ENSDARG00000027586 8 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]










Genes with expression patterns similar to top3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3b ENSDARG00000027586 8 6 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
2. PLEKHS1_2 PLEKHS1_2 21 2 - - - - 1.000 - 1.000 - -
3. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
4. IQGAP3 ENSDARG00000098650 5 2 - - - - 1.000 - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
5. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
6. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
7. si:ch211-220b11.4 si:ch211-220b11.4 8 1.916 - - - - 0.916 1.000 - - -
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.914 - - - 1.000 - - 0.914 - -
9. KCNK17 ENSDARG00000105453 16 1.861 - - - - - 0.861 - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
10. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
11. GM2A ENSDARG00000088439 55 1.845 - - - 1.000 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
12. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
13. si:ch211-233h19.2 ENSDARG00000042213 47 1.785 - - - 0.785 - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
14. CU104716.2 CU104716.2 10 1.781 - - - - 0.781 - 1.000 - -
15. TMBIM1 TMBIM1 2 1.772 - - - - - 1.000 - - 0.772
16. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - - 1.000 - -
17. si:ch73-248e21.5 ENSDARG00000088283 19 1.723 - - - - - - 1.000 - 0.723 si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
18. gsto1 ENSDARG00000022183 13 1.72 - - - - 0.962 - 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
19. avpr2aa ENSDARG00000007436 43 1.713 - - - 0.713 - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
20. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
21. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
22. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
23. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.57 - - - - 0.750 - 0.820 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
24. rag1 ENSDARG00000052122 13 1.486 - - 0.712 - - - - - 0.774 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
25. si:ch211-197n1.2 58 1.476 - - - - - - 0.750 - 0.726 si:ch211-197n1.2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 1.446 - - - 0.709 - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. CU041398.1 CU041398.1 17 1 - - - - - 1.000 - - -
28. ucn3l ENSDARG00000087241 29 1 - - - - - - 1.000 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
29. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
30. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - - - - - - 1.000 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
31. urgcp ENSDARG00000036767 6 1 - - - - - - 1.000 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
32. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - - 1.000 monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
33. npffr1l3 ENSDARG00000010712 18 1 - - - - - - 1.000 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
34. MFAP4_6 MFAP4_6 162 1 - - - - - 1.000 - - -
35. si:ch211-199m9.2 si:ch211-199m9.2 9 1 - - - - - - 1.000 - -
36. si:ch211-240l19.6 ENSDARG00000074613, ENSDARG00000115536 7 1 - - - - 1.000 - - - - si:ch211-240l19.6 [Source:ZFIN;Acc:ZDB-GENE-041210-328]
37. si:ch211-255g12.5 si:ch211-255g12.5 7 1 - - - - - - - - 1.000
38. si:ch211-62a1.1 si:ch211-62a1.1 6 1 - - - - - 1.000 - - -
39. BX901974.1 ENSDARG00000067592 2 1 - - - - - - 1.000 - -
40. tlr5a ENSDARG00000044415 3 1 - - - 1.000 - - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
41. U1_43 U1_43 0 1 - - - 1.000 - - - - -
42. ryr2b ENSDARG00000003706 6 1 - - - 1.000 - - - - - ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
43. pkhd1l1 ENSDARG00000091116 23 1 - - - - - - 1.000 - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
44. hyal6 ENSDARG00000038166, ENSDARG00000111343 2 1 - - - 1.000 - - - - - hyaluronoglucosaminidase 6 [Source:ZFIN;Acc:ZDB-GENE-070112-2372]
45. picalml picalml 0 1 - - - - - - - - 1.000
46. si:ch211-119d14.3 ENSDARG00000075332 12 1 - - - - - 1.000 - - - si:ch211-119d14.3 [Source:ZFIN;Acc:ZDB-GENE-081104-100]
47. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - - - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
48. htra3a ENSDARG00000052895 28 1 - - - 1.000 - - - - - HtrA serine peptidase 3a [Source:ZFIN;Acc:ZDB-GENE-040801-245]
49. IYD IYD 8 1 - - - - - - 1.000 - -
50. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - 1.000 - - - -
51. slc6a18 ENSDARG00000068387 6 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
52. CELA1 CELA1 14 1 - - - - - - 1.000 - -
53. nitr3a_1 ENSDARG00000110676 44 1 - - - - - - 1.000 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
54. CU181898.1 CU181898.1 0 1 - - - 1.000 - - - - -
55. IMPG2_1 IMPG2_1 2 1 - - - 1.000 - - - - -
56. CU570981.1 CU570981.1 9 1 - - - - - 1.000 - - -
57. si:ch211-113a14.26_3 6 1 - - - - - - - - 1.000 si:ch211-113a14.26
58. C25H12orf29 C25H12orf29 31 1 - - - - - - 1.000 - -
59. pth2r ENSDARG00000006678, ENSDARG00000112414 46 1 - - - - - - 1.000 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
60. zgc:173443 ENSDARG00000034403 26 1 - - - - - - 1.000 - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
61. CCDC88A_1 CCDC88A_1 12 1 - - - - - 1.000 - - -
62. CCL19 CCL19 6 1 - - - - - 1.000 - - -
63. CU915534.1 ENSDARG00000105830 1 1 - - - - - 1.000 - - -
64. pxn pxn 10 1 - - - - - - 1.000 - -
65. si:dkeyp-69b9.2 si:dkeyp-69b9.2 25 1 - - - 1.000 - - - - -
66. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 1 - - - - - - 1.000 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
67. cd44a ENSDARG00000087863 4 1 - - - 1.000 - - - - - CD44 molecule (Indian blood group) a [Source:ZFIN;Acc:ZDB-GENE-110429-1]
68. si:dkey-78k22.2 si:dkey-78k22.2 2 1 - - - 1.000 - - - - -
69. CU207245.2 ENSDARG00000113016 1 1 - - - - - - - - 1.000
70. SPDEF ENSDARG00000029930 60 1 - - - - - - 1.000 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
71. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
72. si:ch211-226h8.14 ENSDARG00000088713, ENSDARG00000116143 75 1 - - - - - 1.000 - - - si:ch211-226h8.14 [Source:ZFIN;Acc:ZDB-GENE-050208-470]
73. fbxo32 ENSDARG00000040277 93 1 - - - - - - 1.000 - - F-box protein 32 [Source:ZFIN;Acc:ZDB-GENE-040426-1040]
74. wee1 ENSDARG00000093864, ENSDARG00000114333, ENSDARG00000115653 1 1 - - - - - - - - 1.000 WEE1 G2 checkpoint kinase [Source:ZFIN;Acc:ZDB-GENE-030131-5268]
75. tipin ENSDARG00000036136, ENSDARG00000110772 3 1 - - - - - - - - 1.000 timeless interacting protein [Source:ZFIN;Acc:ZDB-GENE-040801-189]
76. EGFLAM 0 1 - - - - - 1.000 - - - EGF like, fibronectin type III and laminin G domains, transcript variant X2
77. BX321875.3 ENSDARG00000112569 24 1 - - - 1.000 - - - - -
78. FBXO15 ENSDARG00000016897 4 1 - - - 1.000 - - - - - F-box protein 15 [Source:ZFIN;Acc:ZDB-GENE-080416-4]
79. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
80. MMP20 MMP20 1 1 - - - - - - 1.000 - -
81. CU855711.1 ENSDARG00000088643 6 1 - - - - - - 1.000 - - legumain-like [Source:NCBI gene;Acc:108191752]
82. SEMA6B SEMA6B 35 1 - - - - - - 1.000 - -
83. CR626884.3 ENSDARG00000104648 1 1 - - - 1.000 - - - - -
84. CR854891.1 CR854891.1 7 1 - - - - - - 1.000 - -
85. si:ch211-131e11.15 si:ch211-131e11.15 0 1 - - - 1.000 - - - - -
86. BX005442.2 ENSDARG00000111949 0 1 - - - 1.000 - - - - -
87. CREBBP CREBBP 8 1 - - - 1.000 - - - - -
88. gng8 ENSDARG00000042970 117 1 - - - - - 1.000 - - - guanine nucleotide binding protein (G protein), gamma 8 [Source:ZFIN;Acc:ZDB-GENE-050522-312]
89. si:dkey-4e4.1 ENSDARG00000096026, ENSDARG00000109251 48 1 - - - - - 1.000 - - - si:dkey-4e4.1 [Source:ZFIN;Acc:ZDB-GENE-110914-73]
90. ubr1 ENSDARG00000060480 71 1 - - - - - - 1.000 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
91. mcm5_1 ENSDARG00000019507 10 1 - - - 1.000 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
92. cabp7b ENSDARG00000060846 5 1 - - - - - 1.000 - - - calcium binding protein 7b [Source:ZFIN;Acc:ZDB-GENE-060526-366]
93. CABZ01070637.1 CABZ01070637.1 1 1 - - - - - 1.000 - - -
94. si:dkey-77p23.1 si:dkey-77p23.1 4 1 - - - - - 1.000 - - -
95. si:dkey-219e20.3 si:dkey-219e20.3 1 1 - - - - - 1.000 - - -
96. CABZ01060030.1 ENSDARG00000106579 55 1 - - - 1.000 - - - - - rho-related BTB domain-containing protein 2-like [Source:NCBI gene;Acc:100331257]
97. SRCRB4D SRCRB4D 4 1 - - - - - 1.000 - - -
98. btr22 ENSDARG00000100539 137 1 - - - - 1.000 - - - - bloodthirsty-related gene family, member 22 [Source:ZFIN;Acc:ZDB-GENE-080402-4]
99. g6pcb ENSDARG00000014967 8 1 - - - - - - 1.000 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
100. umodl1 ENSDARG00000068923 2 1 - - - - - - - - 1.000 uromodulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-140]

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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