Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top3b

Gene Name Gene ID Reads Annotation
top3b ENSDARG00000027586 8 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]










Genes with expression patterns similar to top3b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3b ENSDARG00000027586 8 6 - - 1.000 1.000 1.000 1.000 1.000 - 1.000 DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
2. PGBD4_4 PGBD4_4 15 2 - - - - - 1.000 1.000 - -
3. si:dkeyp-3f10.17 ENSDARG00000087254 1 2 - - - - - 1.000 1.000 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
4. PLEKHS1_2 PLEKHS1_2 21 2 - - - - 1.000 - 1.000 - -
5. IQGAP3 ENSDARG00000098650 5 2 - - - - 1.000 - - - 1.000 IQ motif containing GTPase activating protein 3 [Source:ZFIN;Acc:ZDB-GENE-160226-1]
6. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 2 - - - - - 1.000 1.000 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
7. si:ch211-220b11.4 si:ch211-220b11.4 8 1.916 - - - - 0.916 1.000 - - -
8. si:ch211-105d18.7 si:ch211-105d18.7 6 1.914 - - - 1.000 - - 0.914 - -
9. KCNK17 ENSDARG00000105453 16 1.861 - - - - - 0.861 - - 1.000 potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
10. nub1 ENSDARG00000061417 33 1.858 - - - - - 0.954 0.904 - - negative regulator of ubiquitin-like proteins 1 [Source:ZFIN;Acc:ZDB-GENE-080212-11]
11. GM2A ENSDARG00000088439 55 1.845 - - - 1.000 - - 0.845 - - GM2 ganglioside activator [Source:ZFIN;Acc:ZDB-GENE-050417-373]
12. si:ch211-233h19.2 ENSDARG00000042213 47 1.785 - - - 0.785 - - 1.000 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
13. si:ch211-237l4.6 ENSDARG00000056915 49 1.785 - - - - - 0.871 0.914 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
14. CU104716.2 CU104716.2 10 1.781 - - - - 0.781 - 1.000 - -
15. TMBIM1 TMBIM1 2 1.772 - - - - - 1.000 - - 0.772
16. si:ch211-190k17.13 si:ch211-190k17.13 48 1.769 - - - 0.769 - - 1.000 - -
17. si:ch73-248e21.5 ENSDARG00000088283 19 1.723 - - - - - - 1.000 - 0.723 si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
18. gsto1 ENSDARG00000022183 13 1.72 - - - - 0.962 - 0.758 - - glutathione S-transferase omega 1 [Source:ZFIN;Acc:ZDB-GENE-040718-365]
19. avpr2aa ENSDARG00000007436 43 1.713 - - - 0.713 - - 1.000 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
20. si:dkey-86e18.1 ENSDARG00000043536 75 1.621 - - - - - 0.717 0.904 - - si:dkey-86e18.1 [Source:ZFIN;Acc:ZDB-GENE-041014-18]
21. ENSDARG00000092910 ENSDARG00000092910 44 1.602 - - - - - 0.808 0.794 - -
22. si:dkey-165i8.5 si:dkey-165i8.5 21 1.581 - - - - - 0.808 0.773 - -
23. si:dkey-7n6.2 ENSDARG00000094602, ENSDARG00000111257 56 1.57 - - - - 0.750 - 0.820 - - si:dkey-7n6.2 [Source:ZFIN;Acc:ZDB-GENE-091204-262]
24. rag1 ENSDARG00000052122 13 1.486 - - 0.712 - - - - - 0.774 recombination activating gene 1 [Source:ZFIN;Acc:ZDB-GENE-990415-234]
25. si:ch211-197n1.2 58 1.476 - - - - - - 0.750 - 0.726 si:ch211-197n1.2, transcript variant X1
26. si:ch211-132g1.6 ENSDARG00000093102 13 1.446 - - - 0.709 - 0.737 - - - si:ch211-132g1.6 [Source:ZFIN;Acc:ZDB-GENE-091204-469]
27. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - - - 1.000 - -
28. hmx4 ENSDARG00000007941, ENSDARG00000115000, ENSDARG00000116208 447 1 - - - - - 1.000 - - - H6 family homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-060825-142]
29. GSTK1_2 GSTK1_2 8 1 - - - - - 1.000 - - -
30. MYL2 MYL2 7 1 - - - 1.000 - - - - -
31. katnal2 ENSDARG00000012275 0 1 - - - - - - - - 1.000 katanin p60 subunit A-like 2 [Source:ZFIN;Acc:ZDB-GENE-051113-156]
32. rpe65c ENSDARG00000054420, ENSDARG00000113640 28 1 - - - - - - - - 1.000 retinal pigment epithelium-specific protein 65c [Source:ZFIN;Acc:ZDB-GENE-081104-505]
33. CU207245.2 ENSDARG00000113016 1 1 - - - - - - - - 1.000
34. CABZ01080134.1 CABZ01080134.1 2 1 - - - 1.000 - - - - -
35. GALNTL6 ENSDARG00000040048 33 1 - - - - - - 1.000 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
36. ZC3H12A ENSDARG00000005271 5 1 - - - - - - 1.000 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
37. CR388132.1 ENSDARG00000097728 61 1 - - - - - 1.000 - - -
38. TGFBR2 TGFBR2 2 1 - - - - 1.000 - - - -
39. CCDC180 ENSDARG00000032372 21 1 - - - - - 1.000 - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
40. or115-15 ENSDARG00000079294 1 1 - - - - - - - - 1.000 odorant receptor, family F, subfamily 115, member 15 [Source:ZFIN;Acc:ZDB-GENE-990415-189]
41. rnasel2 ENSDARG00000043196 0 1 - - - - - 1.000 - - - ribonuclease like 2 [Source:ZFIN;Acc:ZDB-GENE-050208-420]
42. tbx5b ENSDARG00000092060 37 1 - - - - - - 1.000 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
43. PSMD2 ENSDARG00000099653 97 1 - - - - - 1.000 - - - proteasome 26S subunit, non-ATPase 2 [Source:HGNC Symbol;Acc:HGNC:9559]
44. usp46 ENSDARG00000045343 65 1 - - - - - 1.000 - - - ubiquitin specific peptidase 46 [Source:ZFIN;Acc:ZDB-GENE-070705-213]
45. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 1 - - - - - - 1.000 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
46. si:dkey-22i16.9 ENSDARG00000095949 16 1 - - - - - 1.000 - - - si:dkey-22i16.9 [Source:ZFIN;Acc:ZDB-GENE-090313-261]
47. moxd1l ENSDARG00000069296, ENSDARG00000115126 2 1 - - - - - - - - 1.000 monooxygenase, DBH-like 1, like [Source:ZFIN;Acc:ZDB-GENE-060126-3]
48. CU929052.1 CU929052.1 642 1 - - - - - - 1.000 - -
49. slc6a18 ENSDARG00000068387 6 1 - - - - - - 1.000 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
50. STX1A ENSDARG00000058994 0 1 - - - 1.000 - - - - - syntaxin 1A (brain) [Source:ZFIN;Acc:ZDB-GENE-100802-1]
51. il11a ENSDARG00000037859 5 1 - - - - - - 1.000 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
52. TRAF2 TRAF2 13 1 - - - 1.000 - - - - -
53. pcmtd2 ENSDARG00000053820, ENSDARG00000113456 59 1 - - - - - 1.000 - - - protein-L-isoaspartate (D-aspartate) O-methyltransferase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060312-14]
54. tmem176l.2 ENSDARG00000089399 22 1 - - - - - 1.000 - - - transmembrane protein 176l.2 [Source:ZFIN;Acc:ZDB-GENE-080829-12]
55. KBTBD13 ENSDARG00000076449 10 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
56. CABZ01034857.1 CABZ01034857.1 1 1 - - - - - - 1.000 - -
57. slc5a1 ENSDARG00000013871 4 1 - - - - - - 1.000 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
58. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 1 - - - - - - 1.000 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
59. ONECUT2 ENSDARG00000090387 8 1 - - - 1.000 - - - - - one cut homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-120215-73]
60. si:ch211-161m3.4 ENSDARG00000103375 10 1 - - - - - 1.000 - - - si:ch211-161m3.4 [Source:ZFIN;Acc:ZDB-GENE-110914-169]
61. CABZ01080550.1 ENSDARG00000100621 3 1 - - - - - - 1.000 - -
62. mmrn2a ENSDARG00000076135 37 1 - - - - - - 1.000 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
63. clcn2 clcn2 13 1 - - - - - 1.000 - - -
64. pdcb ENSDARG00000017634 10 1 - - - - - - 1.000 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
65. cyp2n13 ENSDARG00000042953 10 1 - - - - - - 1.000 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
66. si:ch73-189n23.1 ENSDARG00000086247 15 1 - - - - - - 1.000 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
67. dzank1 ENSDARG00000055787, ENSDARG00000111473 26 1 - - - - - 1.000 - - - double zinc ribbon and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-051113-296]
68. vtg3 ENSDARG00000016448 8 1 - - - 1.000 - - - - - vitellogenin 3, phosvitinless [Source:ZFIN;Acc:ZDB-GENE-991019-2]
69. adipoqb ENSDARG00000100086 5 1 - - - - - 1.000 - - - adiponectin, C1Q and collagen domain containing, b [Source:ZFIN;Acc:ZDB-GENE-060825-220]
70. UBXN11 ENSDARG00000053828 22 1 - - - - - 1.000 - - - UBX domain protein 11 [Source:ZFIN;Acc:ZDB-GENE-100922-125]
71. Metazoa_SRP_25 Metazoa_SRP_25 13 1 - - - - 1.000 - - - -
72. EXD1 ENSDARG00000098669 27 1 - - - 1.000 - - - - - exonuclease 3'-5' domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060825-267]
73. CABZ01116714.1 CABZ01116714.1 4 1 - - - - 1.000 - - - -
74. CABZ01016604.1 CABZ01016604.1 12 1 - - - 1.000 - - - - -
75. si:dkey-15h8.13 si:dkey-15h8.13 3 1 - - - - - 1.000 - - -
76. BX511021.2 ENSDARG00000097646 5 1 - - - - - - 1.000 - -
77. gpr155a ENSDARG00000090804 27 1 - - - 1.000 - - - - - G protein-coupled receptor 155a [Source:ZFIN;Acc:ZDB-GENE-100922-89]
78. chst2b ENSDARG00000058585 33 1 - - - - - 1.000 - - - carbohydrate (N-acetylglucosamine-6-O) sulfotransferase 2b [Source:ZFIN;Acc:ZDB-GENE-060720-33]
79. si:ch211-76l23.4 ENSDARG00000096242 202 1 - - - - - 1.000 - - - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
80. tmem64 ENSDARG00000061723, ENSDARG00000113304 62 1 - - - - - 1.000 - - - transmembrane protein 64 [Source:ZFIN;Acc:ZDB-GENE-060503-182]
81. dnajc17 ENSDARG00000104959 70 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 17 [Source:ZFIN;Acc:ZDB-GENE-040426-894]
82. CCL19 CCL19 6 1 - - - - - 1.000 - - -
83. FMNL1 FMNL1 7 1 - - - 1.000 - - - - -
84. pabpc1l ENSDARG00000002597, ENSDARG00000112364 3 1 - - - 1.000 - - - - - poly(A) binding protein, cytoplasmic 1-like [Source:ZFIN;Acc:ZDB-GENE-030131-5836]
85. CU302326.1 CU302326.1 1 1 - - - 1.000 - - - - -
86. SSTR2 SSTR2 12 1 - - - 1.000 - - - - -
87. rhot1b ENSDARG00000103313, ENSDARG00000109702, ENSDARG00000114871 44 1 - - - - - 1.000 - - - ras homolog family member T1 [Source:ZFIN;Acc:ZDB-GENE-061009-52]
88. si:ch211-113a14.26_3 6 1 - - - - - - - - 1.000 si:ch211-113a14.26
89. tlr20al tlr20al 0 1 - - - - - 1.000 - - -
90. CACNA2D1_1 ENSDARG00000073752 2 1 - - - - - 1.000 - - - calcium voltage-gated channel auxiliary subunit alpha2delta 1 [Source:HGNC Symbol;Acc:HGNC:1399]
91. PDE4B PDE4B 13 1 - - - - - - - - 1.000
92. ampd2 ampd2 6 1 - - - - - - - - 1.000
93. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 1 - - - - - - 1.000 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
94. umodl1 ENSDARG00000068923 2 1 - - - - - - - - 1.000 uromodulin-like 1 [Source:ZFIN;Acc:ZDB-GENE-091204-140]
95. zgc:174704 10 1 - - - - - 1.000 - - - zgc:174704, transcript variant X2
96. si:ch211-196h16.12 ENSDARG00000028276 3 1 - - - - - 1.000 - - - si:ch211-196h16.12 [Source:ZFIN;Acc:ZDB-GENE-121214-351]
97. wnt3a ENSDARG00000058822 5 1 - - - - - - 1.000 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
98. FAM177B 9 1 - - - - - - 1.000 - - family with sequence similarity 177 member B
99. U1_24 U1_24 0 1 - - - 1.000 - - - - -
100. scpp1 ENSDARG00000090416 1 1 - - - 1.000 - - - - - secretory calcium-binding phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-090424-1]

There are 825 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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