Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for top3a

Gene Name Gene ID Reads Annotation
top3a ENSDARG00000052827 148 DNA topoisomerase III alpha [Source:ZFIN;Acc:ZDB-GENE-071212-2]










Genes with expression patterns similar to top3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top3a ENSDARG00000052827 148 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase III alpha [Source:ZFIN;Acc:ZDB-GENE-071212-2]
2. si:dkey-234d14.2 ENSDARG00000092275 30 1.821 0.903 - - - - - 0.918 - - si:dkey-234d14.2 [Source:ZFIN;Acc:ZDB-GENE-100922-134]
3. zmynd19 ENSDARG00000100773 224 1.806 - 0.953 - - - - 0.853 - - zinc finger, MYND-type containing 19 [Source:ZFIN;Acc:ZDB-GENE-030131-4460]
4. PLA2G4C_2 PLA2G4C_2 10 1.8 - 0.983 - - - - 0.817 - -
5. HIST1H4J HIST1H4J 31 1.775 0.848 0.927 - - - - - - -
6. slc25a35 ENSDARG00000102783 129 1.756 0.868 0.888 - - - - - - - solute carrier family 25, member 35 [Source:ZFIN;Acc:ZDB-GENE-060526-142]
7. zc3h10 ENSDARG00000030335 236 1.721 0.825 0.896 - - - - - - - zinc finger CCCH-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2359]
8. CABZ01049362.1 ENSDARG00000099508 570 1.687 - 0.870 - - - - 0.817 - -
9. cers4a ENSDARG00000031387 19 1.685 - 0.983 - - - 0.702 - - - ceramide synthase 4a [Source:ZFIN;Acc:ZDB-GENE-020808-1]
10. TTF1_2 TTF1_2 26 1.685 - 0.983 - - - 0.702 - - -
11. PKHD1L1 ENSDARG00000091116 39 1.684 - 0.906 - - - - 0.778 - - polycystic kidney and hepatic disease 1 (autosomal recessive)-like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-475]
12. rnf11b ENSDARG00000040635 242 1.679 - 0.754 - - - 0.925 - - - ring finger protein 11b [Source:ZFIN;Acc:ZDB-GENE-050913-69]
13. si:dkey-98j1.5 ENSDARG00000094005 10 1.663 - - - - - 0.846 0.817 - - si:dkey-98j1.5 [Source:ZFIN;Acc:ZDB-GENE-090313-358]
14. unc93b1 ENSDARG00000069114 37 1.656 0.839 - - - - - 0.817 - - unc-93 homolog B1, TLR signaling regulator [Source:ZFIN;Acc:ZDB-GENE-130424-1]
15. si:ch211-229l10.12 si:ch211-229l10.12 95 1.635 - 0.709 - - - 0.926 - - -
16. lpar6a ENSDARG00000062552 1348 1.63 0.854 0.776 - - - - - - - lysophosphatidic acid receptor 6a [Source:ZFIN;Acc:ZDB-GENE-061013-343]
17. btr21 ENSDARG00000058329, ENSDARG00000100450 120 1.627 - 0.767 - - - - 0.860 - - bloodthirsty-related gene family, member 21 [Source:ZFIN;Acc:ZDB-GENE-081031-80]
18. agxt2 ENSDARG00000100709 799 1.625 - 0.853 - - - 0.772 - - - alanine--glyoxylate aminotransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-100]
19. osbpl11 ENSDARG00000076328 195 1.613 - 0.813 - - - - 0.800 - - oxysterol binding protein-like 11 [Source:ZFIN;Acc:ZDB-GENE-081105-135]
20. CABZ01084007.1 CABZ01084007.1 199 1.549 - 0.818 - - - - 0.731 - -
21. C12H17orf62_1 C12H17orf62_1 83 1.543 0.841 - - - - 0.702 - - -
22. znhit2 ENSDARG00000030805 197 1.541 0.757 0.784 - - - - - - - zinc finger, HIT-type containing 2 [Source:ZFIN;Acc:ZDB-GENE-061103-46]
23. TRAF3IP2 TRAF3IP2 153 1.539 0.773 0.766 - - - - - - -
24. si:dkeyp-30e7.2 ENSDARG00000094387 87 1.53 - 0.804 - - - - 0.726 - - si:dkeyp-30e7.2 [Source:ZFIN;Acc:ZDB-GENE-081104-498]
25. CPLX1 CPLX1 386 1.528 0.738 0.790 - - - - - - -
26. si:dkey-25e12.3 ENSDARG00000055365, ENSDARG00000113269 87 1.519 0.809 0.710 - - - - - - - si:dkey-25e12.3 [Source:ZFIN;Acc:ZDB-GENE-041001-132]
27. cep63 ENSDARG00000056862 194 1.5 0.704 - - - - - 0.796 - - centrosomal protein 63 [Source:ZFIN;Acc:ZDB-GENE-040426-1154]
28. st3gal5l st3gal5l 355 1.481 - 0.757 - - - - 0.724 - -
29. CABZ01069006.1 CABZ01069006.1 363 1.47 0.708 0.762 - - - - - - -
30. ZNF337_3 ZNF337_3 561 1.452 - - - - - 0.704 0.748 - -
31. cyp2aa2 ENSDARG00000104811 77 1.432 - - - - - 0.702 0.730 - - y cytochrome P450, family 2, subfamily AA, polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061027-232]
32. MFAP4 ENSDARG00000090783 8 1 - - - - - 1.000 - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
33. kif17 ENSDARG00000055238 12 1 - - - - - 1.000 - - - kinesin family member 17 [Source:ZFIN;Acc:ZDB-GENE-080724-12]
34. mcf2lb ENSDARG00000076480 50 1 - - - - - 1.000 - - - mcf.2 cell line derived transforming sequence-like b [Source:ZFIN;Acc:ZDB-GENE-081104-416]
35. slc6a6a ENSDARG00000012534 183 1 - 1.000 - - - - - - - solute carrier family 6 (neurotransmitter transporter), member 6a [Source:ZFIN;Acc:ZDB-GENE-081104-1]
36. C4H12orf39 C4H12orf39 73 1 - - - - - 1.000 - - -
37. il10ra ENSDARG00000100383 6 1 - - - - - 1.000 - - - interleukin 10 receptor, alpha [Source:ZFIN;Acc:ZDB-GENE-070905-4]
38. zgc:162509 ENSDARG00000070604, ENSDARG00000095688 25 1 - 1.000 - - - - - - - zgc:162509 [Source:ZFIN;Acc:ZDB-GENE-050809-100]
39. si:dkey-29j8.5 si:dkey-29j8.5 9 1 - - - - - 1.000 - - -
40. CABZ01059415.2 CABZ01059415.2 195 0.984 - 0.984 - - - - - - -
41. epha8 22 0.983 - 0.983 - - - - - - - eph receptor A8
42. znf142 ENSDARG00000061373 47 0.983 - 0.983 - - - - - - - zinc finger protein 142 [Source:ZFIN;Acc:ZDB-GENE-080512-2]
43. ndufs8b ENSDARG00000057055 10 0.983 - 0.983 - - - - - - - NADH:ubiquinone oxidoreductase core subunit S8b [Source:ZFIN;Acc:ZDB-GENE-050522-131]
44. SSTR2 SSTR2 12 0.983 - 0.983 - - - - - - -
45. SOX8 SOX8 22 0.983 - 0.983 - - - - - - -
46. FKBP15 FKBP15 15 0.983 - 0.983 - - - - - - -
47. itln2_1 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 3 0.983 - 0.983 - - - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
48. CR847511.1 CR847511.1 80 0.983 - 0.983 - - - - - - -
49. si:dkey-1b17.5 ENSDARG00000101425 130 0.983 - 0.983 - - - - - - - si:dkey-1b17.5 [Source:ZFIN;Acc:ZDB-GENE-050208-704]
50. olfml3a ENSDARG00000061852 139 0.983 - 0.983 - - - - - - - olfactomedin-like 3a [Source:ZFIN;Acc:ZDB-GENE-060825-31]
51. RBM44 RBM44 25 0.983 - 0.983 - - - - - - -
52. si:ch211-126g16.8 3 0.983 - 0.983 - - - - - - - si:ch211-126g16.8, transcript variant X1
53. CR388013.3 CR388013.3 45 0.983 - 0.983 - - - - - - -
54. CABZ01112647.1 CABZ01112647.1 147 0.983 - 0.983 - - - - - - -
55. opn1mw1 ENSDARG00000097008 9 0.983 - 0.983 - - - - - - - opsin 1 (cone pigments), medium-wave-sensitive, 1 [Source:ZFIN;Acc:ZDB-GENE-990604-42]
56. FRRS1 FRRS1 80 0.983 - 0.983 - - - - - - -
57. HTRA4 ENSDARG00000005943 77 0.983 - 0.983 - - - - - - - HtrA serine peptidase 4 [Source:ZFIN;Acc:ZDB-GENE-131120-192]
58. si:dkey-30j10.5 ENSDARG00000093186 13 0.983 - 0.983 - - - - - - - si:dkey-30j10.5 [Source:ZFIN;Acc:ZDB-GENE-091118-81]
59. si:dkey-149i8.3 si:dkey-149i8.3 9 0.983 - 0.983 - - - - - - -
60. BX569789.1 ENSDARG00000099678 4 0.983 - 0.983 - - - - - - - GTPase IMAP family member 4-like [Source:NCBI gene;Acc:571582]
61. MYO1C MYO1C 140 0.983 - 0.983 - - - - - - -
62. VASH1 ENSDARG00000092716 33 0.983 - 0.983 - - - - - - - vasohibin 1 [Source:HGNC Symbol;Acc:HGNC:19964]
63. FMN1_1 FMN1_1 13 0.983 - 0.983 - - - - - - -
64. CABZ01035647.1 CABZ01035647.1 5 0.983 - 0.983 - - - - - - -
65. CU367845.1_1 CU367845.1_1 43 0.983 - 0.983 - - - - - - -
66. cfhl1 ENSDARG00000105212, ENSDARG00000111582 35 0.983 - 0.983 - - - - - - - complement factor H like 1 [Source:ZFIN;Acc:ZDB-GENE-050208-342]
67. p2ry10 ENSDARG00000062811, ENSDARG00000111991, ENSDARG00000112838 4 0.983 - 0.983 - - - - - - - P2Y receptor family member 10 [Source:ZFIN;Acc:ZDB-GENE-070410-105]
68. sst3 61 0.983 - 0.983 - - - - - - - somatostatin 3
69. insig2 ENSDARG00000113367 27 0.983 - 0.983 - - - - - - - insulin induced gene 2 [Source:ZFIN;Acc:ZDB-GENE-040202-1]
70. esr2b ENSDARG00000034181 20 0.983 - 0.983 - - - - - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]
71. si:dkey-204a24.11 ENSDARG00000058685 3 0.983 - 0.983 - - - - - - - si:dkey-204a24.11 [Source:ZFIN;Acc:ZDB-GENE-120215-129]
72. CCNJ ENSDARG00000059917 115 0.983 - 0.983 - - - - - - - cyclin J [Source:ZFIN;Acc:ZDB-GENE-100721-4]
73. megf8_2 ENSDARG00000079751, ENSDARG00000103934 32 0.983 - 0.983 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
74. ch25hl1.1 ENSDARG00000039381, ENSDARG00000109469, ENSDARG00000113169 838 0.983 - 0.983 - - - - - - - cholesterol 25-hydroxylase like 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8617]
75. lamb1a_1 ENSDARG00000101209 13 0.983 - 0.983 - - - - - - - laminin, beta 1a [Source:ZFIN;Acc:ZDB-GENE-021226-1]
76. si:ch211-251f6.7 ENSDARG00000091558 25 0.983 - 0.983 - - - - - - - si:ch211-251f6.7 [Source:ZFIN;Acc:ZDB-GENE-091113-57]
77. pyya ENSDARG00000053449 134 0.983 - 0.983 - - - - - - - peptide YYa [Source:ZFIN;Acc:ZDB-GENE-980526-71]
78. MCC ENSDARG00000105237 4 0.983 - 0.983 - - - - - - - MCC, WNT signaling pathway regulator [Source:ZFIN;Acc:ZDB-GENE-141210-1]
79. si:dkey-90a24.1 3 0.983 - 0.983 - - - - - - - si:dkey-90a24.1, transcript variant X4
80. TARBP1 TARBP1 17 0.983 - 0.983 - - - - - - -
81. BX005421.3 ENSDARG00000114309 7 0.983 - 0.983 - - - - - - -
82. BX511263.1 BX511263.1 64 0.983 - 0.983 - - - - - - -
83. zgc:158856 zgc:158856 23 0.981 - 0.981 - - - - - - -
84. gabrg2 ENSDARG00000053665 434 0.979 - 0.979 - - - - - - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
85. NHS NHS 409 0.976 - 0.976 - - - - - - -
86. agtr1b ENSDARG00000045443 232 0.975 - 0.975 - - - - - - - angiotensin II receptor, type 1b [Source:ZFIN;Acc:ZDB-GENE-110411-117]
87. TGIF2 TGIF2 22 0.974 - 0.974 - - - - - - -
88. CR847998.1 ENSDARG00000104784 518 0.973 - 0.973 - - - - - - -
89. si:ch211-197n1.2 58 0.972 - 0.972 - - - - - - - si:ch211-197n1.2, transcript variant X1
90. ccni2 ENSDARG00000033046 418 0.971 - 0.971 - - - - - - - cyclin I family, member 2 [Source:ZFIN;Acc:ZDB-GENE-081106-2]
91. FAM84B ENSDARG00000032859, ENSDARG00000116831 127 0.971 - 0.971 - - - - - - - family with sequence similarity 84, member B [Source:ZFIN;Acc:ZDB-GENE-060929-1130]
92. zgc:136254 ENSDARG00000068465 27 0.969 - 0.969 - - - - - - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
93. otof otof 127 0.969 - 0.969 - - - - - - -
94. si:ch211-76l23.5 si:ch211-76l23.5 26 0.968 - 0.968 - - - - - - -
95. xdh ENSDARG00000055240 250 0.968 - 0.968 - - - - - - - xanthine dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-070719-9]
96. si:ch211-89o5.3 si:ch211-89o5.3 5 0.967 - 0.967 - - - - - - -
97. zgc:173710 zgc:173710 28 0.967 - 0.967 - - - - - - -
98. zgc:110821 ENSDARG00000077085 210 0.967 - 0.967 - - - - - - - zgc:110821 [Source:ZFIN;Acc:ZDB-GENE-050227-8]
99. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 0.967 - 0.967 - - - - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
100. NPBWR2 NPBWR2 132 0.967 - 0.967 - - - - - - -

There are 880 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA