Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top2b

Gene Name Gene ID Reads Annotation
top2b ENSDARG00000034195 3715 DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]










Genes with expression patterns similar to top2b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top2b ENSDARG00000034195 3715 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase II beta [Source:ZFIN;Acc:ZDB-GENE-041008-136]
2. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.566 - - 0.775 - - - 0.907 0.884 - dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
3. gipc1 ENSDARG00000104483 2913 2.479 - - 0.788 - - - 0.805 - 0.886 GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
4. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 2.473 - - - 0.729 - - 0.823 - 0.921 chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
5. zgc:55733 ENSDARG00000103845 1550 2.44 - 0.838 - - - - 0.891 0.711 - zgc:55733 [Source:ZFIN;Acc:ZDB-GENE-040426-791]
6. apex1 ENSDARG00000045843 6345 2.376 - - 0.732 - - - 0.822 0.822 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
7. aspm ENSDARG00000103754 5708 2.312 - 0.725 0.797 - - - 0.790 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
8. mxd3 ENSDARG00000098350 3040 2.283 - - - - - 0.798 0.771 0.714 - MAX dimerization protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-1588]
9. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.28 - - 0.766 0.710 - - 0.804 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
10. rtca ENSDARG00000002215 3558 2.267 - 0.718 0.738 - - - 0.811 - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
11. meaf6 ENSDARG00000101216 6865 2.251 - - - - 0.750 - 0.781 0.720 - MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
12. sdc3 3788 2.25 0.746 - 0.764 - - - - - 0.740 syndecan 3
13. kdm1a ENSDARG00000060679 6152 2.235 - - 0.721 - - - 0.812 0.702 - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
14. scocb ENSDARG00000002217 1844 2.232 0.814 0.700 - - - - 0.718 - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
15. tmpoa ENSDARG00000007315 3638 2.203 0.763 - - 0.727 - - 0.713 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
16. prmt1 ENSDARG00000010246 11311 2.19 - 0.700 0.728 - - - - 0.762 - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
17. kpnb3 ENSDARG00000040245 7967 2.186 - - - 0.712 - - 0.755 - 0.719 karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
18. ANKRD11 ENSDARG00000051886 10024 2.172 - 0.714 0.704 - - - 0.754 - - ankyrin repeat domain 11 [Source:ZFIN;Acc:ZDB-GENE-030131-3932]
19. nova1 ENSDARG00000020178 4129 1.693 - - - - - - 0.786 - 0.907 neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
20. mcm7 ENSDARG00000101180 12417 1.67 - - - - - - 0.824 0.846 - minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
21. morf4l1 ENSDARG00000041155, ENSDARG00000111898, ENSDARG00000111981 4044 1.66 - - - - - - - 0.797 0.863 mortality factor 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-040718-348]
22. zgc:100920 ENSDARG00000042961, ENSDARG00000112929 1384 1.645 - - - - - - 0.895 0.750 - zgc:100920 [Source:ZFIN;Acc:ZDB-GENE-040801-156]
23. KIF1A KIF1A 1686 1.64 - - - - - 0.786 0.854 - -
24. kmt2bb ENSDARG00000060697 5230 1.638 - - 0.737 - - - - - 0.901 lysine (K)-specific methyltransferase 2Bb [Source:ZFIN;Acc:ZDB-GENE-080521-1]
25. MAF1 ENSDARG00000013122 6899 1.634 - - - 0.803 - - - - 0.831 MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
26. si:ch211-288g17.3 ENSDARG00000070959 2425 1.632 - - 0.770 - - - 0.862 - - si:ch211-288g17.3 [Source:ZFIN;Acc:ZDB-GENE-030131-461]
27. SSBP4 ENSDARG00000056483 5156 1.632 - - 0.816 - - - 0.816 - - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
28. dpysl3 ENSDARG00000002587 4381 1.631 - 0.788 - - - - 0.843 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
29. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.63 - - - - - - 0.813 0.817 - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
30. ckbb ENSDARG00000043257 3503 1.628 - - - - - - 0.828 - 0.800 creatine kinase, brain b [Source:ZFIN;Acc:ZDB-GENE-020103-2]
31. fyna ENSDARG00000011370 1679 1.628 - - - - - - 0.884 0.744 - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
32. FAM168B ENSDARG00000101733, ENSDARG00000113953, ENSDARG00000115746 2175 1.62 - - - - - - 0.824 0.796 - family with sequence similarity 168, member B [Source:ZFIN;Acc:ZDB-GENE-060929-180]
33. plk1 ENSDARG00000058471, ENSDARG00000111745 7020 1.619 - - - - - - 0.754 - 0.865 polo-like kinase 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-021115-7]
34. lamb2l ENSDARG00000033950 952 1.614 - - 0.735 - - - 0.879 - - laminin, beta 2-like [Source:ZFIN;Acc:ZDB-GENE-030131-4205]
35. tmpob ENSDARG00000022978 8121 1.614 - - 0.775 - - - 0.839 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
36. atp6v0cb ENSDARG00000036577 3472 1.614 - 0.745 - - - - 0.869 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
37. TUSC3 ENSDARG00000078854 1021 1.613 0.764 - - - - - 0.849 - - tumor suppressor candidate 3 [Source:ZFIN;Acc:ZDB-GENE-050522-381]
38. plp1a ENSDARG00000103732 3544 1.612 - - - - - - 0.857 0.755 - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
39. IGLON5 ENSDARG00000022176 1353 1.61 0.742 - - - - - 0.868 - - IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
40. dnmt3ab ENSDARG00000015566 1206 1.609 - 0.711 - - - - 0.898 - - DNA (cytosine-5-)-methyltransferase 3 alpha b [Source:ZFIN;Acc:ZDB-GENE-050314-3]
41. znf148 ENSDARG00000055106 528 1.604 0.808 - - - - - 0.796 - - zinc finger protein 148 [Source:ZFIN;Acc:ZDB-GENE-030131-8769]
42. znf865 ENSDARG00000036698 15532 1.603 - - - 0.730 - - 0.873 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
43. rbm15b ENSDARG00000078966, ENSDARG00000112832 1888 1.602 - - - 0.791 - - 0.811 - - RNA binding motif protein 15B [Source:ZFIN;Acc:ZDB-GENE-080204-91]
44. zswim5 ENSDARG00000055900 4243 1.601 - - - - - - 0.877 0.724 - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
45. jazf1a ENSDARG00000102551 767 1.598 - - - - - - 0.848 0.750 - JAZF zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-060503-492]
46. hmgb1b ENSDARG00000030479 10398 1.594 - - 0.734 - - - 0.860 - - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
47. npas3b npas3b 1446 1.593 - - 0.749 - - - 0.844 - -
48. klf7a ENSDARG00000073857 1226 1.592 - - - - - - 0.850 - 0.742 Kruppel-like factor 7a [Source:ZFIN;Acc:ZDB-GENE-050522-276]
49. vezf1a ENSDARG00000008247 1449 1.588 - - - 0.721 - - 0.867 - - vascular endothelial zinc finger 1a [Source:ZFIN;Acc:ZDB-GENE-040108-4]
50. plagx ENSDARG00000036855 3768 1.587 - - 0.732 - - - 0.855 - - pleiomorphic adenoma gene X [Source:ZFIN;Acc:ZDB-GENE-030131-839]
51. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.586 - - - 0.772 - - 0.814 - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
52. AKT3 AKT3 1729 1.584 - - - - - - 0.821 0.763 -
53. lsm6 ENSDARG00000036995 4377 1.583 - - - - - - 0.754 - 0.829 LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-040625-50]
54. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 1.581 - - - 0.759 - - 0.822 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
55. thoc7 ENSDARG00000015394 3824 1.578 - 0.784 - - - - - - 0.794 THO complex 7 [Source:ZFIN;Acc:ZDB-GENE-040801-17]
56. dvl2 ENSDARG00000056184 1525 1.578 - - 0.736 - - - - 0.842 - dishevelled segment polarity protein 2 [Source:ZFIN;Acc:ZDB-GENE-041118-20]
57. MAPRE2 ENSDARG00000099943 3041 1.575 - - - - - 0.756 0.819 - - microtubule-associated protein, RP/EB family, member 2 [Source:ZFIN;Acc:ZDB-GENE-071004-41]
58. bcl2_1 bcl2_1 1185 1.575 - - - - - 0.762 0.813 - -
59. CABZ01070258.1 ENSDARG00000105687 3643 1.574 - 0.763 - - - - 0.811 - -
60. fam49a ENSDARG00000006672 939 1.574 - - - - - - 0.743 0.831 - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
61. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.573 - - 0.738 - - - 0.835 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
62. ctbp2 ctbp2 3255 1.573 - - - - - - 0.846 - 0.727
63. ube2d1b ENSDARG00000038576 5971 1.57 - - - - - 0.739 - 0.831 - ubiquitin-conjugating enzyme E2D 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2735]
64. ebf3 ebf3 4238 1.569 - - 0.767 - - - 0.802 - -
65. siah1 ENSDARG00000030871 1590 1.569 - - - - - - 0.827 - 0.742 siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
66. fam60al 2846 1.567 - - 0.758 - - - 0.809 - - family with sequence similarity 60, member A, like
67. rbpjb ENSDARG00000052091 3122 1.567 - - 0.782 - - - 0.785 - - recombination signal binding protein for immunoglobulin kappa J region b [Source:ZFIN;Acc:ZDB-GENE-070319-1]
68. hmgb3a ENSDARG00000056725 15668 1.566 - 0.712 - - - - 0.854 - - high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
69. atf7ip ENSDARG00000069619 5495 1.564 - - - - 0.740 - 0.824 - - activating transcription factor 7 interacting protein [Source:ZFIN;Acc:ZDB-GENE-061103-178]
70. nono ENSDARG00000020482, ENSDARG00000115783 12482 1.563 - - - - - - - 0.736 0.827 non-POU domain containing, octamer-binding [Source:ZFIN;Acc:ZDB-GENE-030131-713]
71. golga7ba ENSDARG00000036295 1460 1.563 - - - - - 0.738 0.825 - - golgin A7 family, member Ba [Source:ZFIN;Acc:ZDB-GENE-050417-14]
72. tpx2 ENSDARG00000078654 8120 1.56 - - - - - - 0.778 - 0.782 TPX2, microtubule-associated, homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-9652]
73. nfya ENSDARG00000042004, ENSDARG00000114231 6606 1.559 - 0.734 - - - - - 0.825 - nuclear transcription factor Y, alpha [Source:ZFIN;Acc:ZDB-GENE-010501-1]
74. ZFHX3 ENSDARG00000103057 7759 1.558 - - 0.719 - - - 0.839 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
75. C24H17orf96 C24H17orf96 1538 1.556 - - - - - - 0.844 0.712 -
76. gnao1a ENSDARG00000016676 8184 1.556 - - 0.714 - - - 0.842 - - guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
77. zfhx4 ENSDARG00000075542 6927 1.555 - - 0.769 - - - - - 0.786 zinc finger homeobox 4 [Source:ZFIN;Acc:ZDB-GENE-070530-3]
78. hdac8 ENSDARG00000003021, ENSDARG00000105159 1729 1.554 0.719 - - - - - 0.835 - - histone deacetylase 8 [Source:ZFIN;Acc:ZDB-GENE-040426-2772]
79. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 1.553 - - - - - - 0.835 0.718 - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
80. rad21a_1 ENSDARG00000006092 4482 1.552 - - - - - - 0.811 0.741 - RAD21 cohesin complex component a [Source:ZFIN;Acc:ZDB-GENE-030131-994]
81. ylpm1 ENSDARG00000043680 7676 1.552 - - 0.715 - - - 0.837 - - YLP motif containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2196]
82. FAM171A2 FAM171A2 707 1.551 - - - - - - 0.740 0.811 -
83. zbtb33 ENSDARG00000071467, ENSDARG00000112085 1425 1.546 - - - - - - 0.766 0.780 - zinc finger and BTB domain containing 33 [Source:ZFIN;Acc:ZDB-GENE-070412-3]
84. sox2 ENSDARG00000070913 2763 1.546 - - - 0.710 - - 0.836 - - SRY (sex determining region Y)-box 2 [Source:ZFIN;Acc:ZDB-GENE-030909-1]
85. rac3a ENSDARG00000090062 394 1.543 0.709 - - - - - 0.834 - - Rac family small GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-040718-256]
86. lgi1a ENSDARG00000020493 1218 1.542 0.745 - - - - - 0.797 - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
87. tle2 5014 1.54 - - - - - 0.717 0.823 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
88. khsrp ENSDARG00000026489 15738 1.539 - - - - - - 0.751 - 0.788 KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
89. ndst3 ENSDARG00000041776 605 1.539 0.822 0.717 - - - - - - - N-deacetylase/N-sulfotransferase (heparan glucosaminyl) 3 [Source:ZFIN;Acc:ZDB-GENE-090312-199]
90. myt1b ENSDARG00000102879 5411 1.539 - - 0.701 - - - 0.838 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
91. mpped2 ENSDARG00000034443, ENSDARG00000114674 527 1.538 - - - - - - 0.826 0.712 - metallophosphoesterase domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8903]
92. ptpro ENSDARG00000100422, ENSDARG00000110470 1850 1.537 - 0.766 - - - - 0.771 - - protein tyrosine phosphatase, receptor type, O [Source:ZFIN;Acc:ZDB-GENE-070424-54]
93. CABZ01065506.1 CABZ01065506.1 204 1.537 - - - - - 0.751 0.786 - -
94. cspg5a ENSDARG00000069981 1699 1.536 - - - - - - 0.823 0.713 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
95. tomm70a ENSDARG00000029639, ENSDARG00000112054 7715 1.534 - - - - - 0.799 - - 0.735 translocase of outer mitochondrial membrane 70 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8173]
96. pou2f1b ENSDARG00000007996 2172 1.531 - - 0.755 - - - 0.776 - - POU class 2 homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-030131-2422]
97. SCAF8 1618 1.531 - 0.713 - - - - 0.818 - - SR-related CTD-associated factor 8, transcript variant X3
98. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.528 - - 0.708 - - - - - 0.820 EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
99. si:ch73-21k16.6 si:ch73-21k16.6 4896 1.528 - 0.786 - - - - 0.742 - -
100. dpysl5a ENSDARG00000011141 1827 1.528 - - - - - - 0.822 0.706 - dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]

There are 1527 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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