Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top2a

Gene Name Gene ID Reads Annotation
top2a ENSDARG00000024488 4273 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]










Genes with expression patterns similar to top2a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top2a ENSDARG00000024488 4273 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase II alpha [Source:ZFIN;Acc:ZDB-GENE-030131-2453]
2. whsc1l1 8544 3.324 - 0.992 - 0.743 - - 0.788 - 0.801 Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
3. MKI67 ENSDARG00000091150 11038 3.029 - - - 0.752 - - 0.709 0.851 0.717 marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
4. pcif1 ENSDARG00000099084 2851 2.737 - - - - 0.965 - - 0.967 0.805 PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
5. tmpoa ENSDARG00000007315 3638 2.704 - 0.983 - - 0.929 - 0.792 - - thymopoietin a [Source:ZFIN;Acc:ZDB-GENE-030131-6003]
6. setbp1 ENSDARG00000093799 4499 2.621 - 0.985 - - - - - 0.893 0.743 SET binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060526-72]
7. max ENSDARG00000024844 6035 2.59 - 0.975 - - - - - 0.844 0.771 myc associated factor X [Source:ZFIN;Acc:ZDB-GENE-990415-152]
8. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.548 - 0.986 - - - 0.764 - - 0.798 TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
9. dr1 ENSDARG00000105098, ENSDARG00000113528 5263 2.543 - - - - - - 0.755 0.956 0.832 down-regulator of transcription 1 [Source:ZFIN;Acc:ZDB-GENE-061013-797]
10. kif22 ENSDARG00000102624 3694 2.505 - - - - - 0.750 - 0.904 0.851 kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
11. Sep-06 Sep-06 5465 2.474 - - - - - - 0.761 0.947 0.766
12. MAP4K4 ENSDARG00000098670 4665 2.473 - - - - 0.927 0.741 - - 0.805 mitogen-activated protein kinase kinase kinase kinase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6722]
13. suv39h1b ENSDARG00000055753 1540 2.47 - 0.991 - - - - 0.738 - 0.741 suppressor of variegation 3-9 homolog 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5105]
14. fzd3a ENSDARG00000021664 1958 2.457 - - - 0.740 - - - 0.908 0.809 frizzled class receptor 3a [Source:ZFIN;Acc:ZDB-GENE-990415-225]
15. GATAD2B ENSDARG00000005834 3855 2.446 - - - - - - 0.703 0.945 0.798 GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
16. marcksl1b ENSDARG00000035715 37390 2.417 - - - 0.810 - - - 0.797 0.810 MARCKS-like 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2315]
17. hnrnpl2 ENSDARG00000059303, ENSDARG00000114431 6633 2.374 - - - 0.825 - 0.772 - 0.777 - heterogeneous nuclear ribonucleoprotein L2 [Source:ZFIN;Acc:ZDB-GENE-040426-2707]
18. lbr ENSDARG00000014013 4835 2.369 - - - - - 0.809 0.705 - 0.855 lamin B receptor [Source:ZFIN;Acc:ZDB-GENE-030804-11]
19. mad2l1 ENSDARG00000004713 3398 2.33 - - - - 0.855 - 0.713 - 0.762 MAD2 mitotic arrest deficient-like 1 (yeast) [Source:ZFIN;Acc:ZDB-GENE-030515-3]
20. hp1bp3 ENSDARG00000044669 23708 2.316 - - - - 0.712 0.790 - 0.814 - heterochromatin protein 1, binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-060810-79]
21. gna11b ENSDARG00000053326 5118 2.276 - - - - - 0.758 - 0.800 0.718 guanine nucleotide binding protein (G protein), alpha 11b (Gq class) [Source:ZFIN;Acc:ZDB-GENE-041121-9]
22. ddx19 ENSDARG00000005699 4602 2.222 - - - - - 0.757 0.716 - 0.749 DEAD/H (Asp-Glu-Ala-Asp/His) box polypeptide 19 (DBP5 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-020419-30]
23. CCNJL ENSDARG00000077116 1197 2.21 - - 0.749 0.742 - - - - 0.719 cyclin J-like [Source:ZFIN;Acc:ZDB-GENE-030131-9888]
24. lypla2 ENSDARG00000053656 8971 2.199 - - - - - - 0.712 0.710 0.777 lysophospholipase II [Source:ZFIN;Acc:ZDB-GENE-040426-1715]
25. emc3 ENSDARG00000020607 3406 1.922 - 0.982 - - - - - 0.940 - ER membrane protein complex subunit 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2904]
26. sh3bp5a ENSDARG00000100529 642 1.915 - - - - 0.947 - - 0.968 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
27. CDCA4 ENSDARG00000042319 7918 1.899 - - - - 0.953 - - 0.946 - cell division cycle associated 4 [Source:ZFIN;Acc:ZDB-GENE-030131-1695]
28. CPEB4 CPEB4 3249 1.89 - 0.990 - - - - - 0.900 -
29. arf6b ENSDARG00000052928 4585 1.876 - - - - 0.942 - - 0.934 - ADP-ribosylation factor 6b [Source:ZFIN;Acc:ZDB-GENE-030131-9056]
30. mphosph8 ENSDARG00000005576, ENSDARG00000114033 5350 1.871 - 0.978 - - - - - 0.893 - M-phase phosphoprotein 8 [Source:ZFIN;Acc:ZDB-GENE-050309-191]
31. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.868 - - - - 0.963 - - 0.905 - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
32. ube2c ENSDARG00000101618, ENSDARG00000114670 5271 1.863 - - - - 0.960 - - 0.903 - ubiquitin-conjugating enzyme E2C [Source:ZFIN;Acc:ZDB-GENE-051030-48]
33. rab5aa ENSDARG00000018602 8947 1.836 - - - - - 0.857 - 0.979 - RAB5A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-030131-139]
34. atp6v1d ENSDARG00000011175 8331 1.835 - - - - 0.876 - - 0.959 - ATPase H+ transporting V1 subunit D [Source:ZFIN;Acc:ZDB-GENE-040426-727]
35. sec31a ENSDARG00000021082, ENSDARG00000111434, ENSDARG00000114514 6991 1.822 - 0.915 - - 0.907 - - - - SEC31 homolog A, COPII coat complex component [Source:ZFIN;Acc:ZDB-GENE-020919-2]
36. CABZ01013938.1 CABZ01013938.1 4497 1.811 - - - - 0.914 - - 0.897 -
37. rcan1a ENSDARG00000003109, ENSDARG00000112478 3319 1.804 - - - - 0.926 - - 0.878 - regulator of calcineurin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-135]
38. eif3c ENSDARG00000016443 18003 1.792 - - - - 0.887 - - 0.905 - eukaryotic translation initiation factor 3, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-6166]
39. rbm25 rbm25 3629 1.787 - - - - 0.957 - - - 0.830
40. pdap1a ENSDARG00000092546, ENSDARG00000116115 7617 1.786 - - - - 0.932 - - - 0.854 pdgfa associated protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1693]
41. snrnp27 ENSDARG00000035625 9080 1.781 - - - - 0.958 - - 0.823 - small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
42. cks1b ENSDARG00000007971 2739 1.78 - 0.984 - - - - - - 0.796 CDC28 protein kinase regulatory subunit 1B [Source:ZFIN;Acc:ZDB-GENE-040801-112]
43. AP3B2 1874 1.765 - - - - - - - 0.965 0.800 adaptor related protein complex 3 beta 2 subunit, transcript variant X2
44. fam122b ENSDARG00000036500, ENSDARG00000116582 1408 1.765 - - - - - - 0.815 0.950 - family with sequence similarity 122B [Source:ZFIN;Acc:ZDB-GENE-040801-204]
45. BAZ1A ENSDARG00000063233, ENSDARG00000099745 1432 1.761 - - - - 0.956 - - - 0.805 bromodomain adjacent to zinc finger domain, 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6105]
46. sf1 ENSDARG00000008188 5142 1.758 - - - - 0.961 - - - 0.797 splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
47. kdm6bb ENSDARG00000056929 4807 1.755 - - - - 0.955 - - - 0.800 lysine (K)-specific demethylase 6B, b [Source:ZFIN;Acc:ZDB-GENE-040724-166]
48. c1d ENSDARG00000021112 2839 1.751 - - - - - - - 0.967 0.784 C1D nuclear receptor corepressor [Source:ZFIN;Acc:ZDB-GENE-041024-8]
49. acin1a ENSDARG00000054290 14023 1.745 - 0.938 - - - - 0.807 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
50. isoc2 ENSDARG00000013371 1378 1.744 - - - - - - 0.814 0.930 - isochorismatase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-070518-1]
51. prps1b ENSDARG00000037506, ENSDARG00000110507 4170 1.741 - - - - - - - 0.950 0.791 phosphoribosyl pyrophosphate synthetase 1B [Source:ZFIN;Acc:ZDB-GENE-030131-4011]
52. vamp2 ENSDARG00000056877 2158 1.738 - - - - - - - 0.954 0.784 vesicle-associated membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8225]
53. fgfr2 ENSDARG00000058115 6743 1.738 - 0.985 - - - - - - 0.753 fibroblast growth factor receptor 2 [Source:ZFIN;Acc:ZDB-GENE-030323-1]
54. jarid2b ENSDARG00000062268 2206 1.738 - - - - 0.934 - - - 0.804 jumonji, AT rich interactive domain 2b [Source:ZFIN;Acc:ZDB-GENE-060503-246]
55. LDLRAD4 LDLRAD4 1237 1.737 - - - - - - - 0.969 0.768
56. dctn3 ENSDARG00000041363 3351 1.736 - - - - 0.954 - 0.782 - - dynactin 3 (p22) [Source:ZFIN;Acc:ZDB-GENE-040704-65]
57. med20 ENSDARG00000046006 614 1.734 - - - - - - 0.762 0.972 - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
58. pik3cb ENSDARG00000075253 2075 1.728 - - - - 0.950 - - 0.778 - phosphatidylinositol-4,5-bisphosphate 3-kinase, catalytic subunit beta [Source:ZFIN;Acc:ZDB-GENE-030131-1904]
59. ck2a1 ck2a1 3749 1.728 - - - - 0.950 - - - 0.778
60. snrpb ENSDARG00000011125 11729 1.726 - - - 0.779 - - - 0.947 - small nuclear ribonucleoprotein polypeptides B and B1 [Source:ZFIN;Acc:ZDB-GENE-040426-1819]
61. sap130b ENSDARG00000079352 1468 1.726 - - - - 0.951 0.775 - - - Sin3A-associated protein b [Source:ZFIN;Acc:ZDB-GENE-070912-570]
62. ctcf ENSDARG00000056621, ENSDARG00000113285 1750 1.725 - - - - - - - 0.954 0.771 CCCTC-binding factor (zinc finger protein) [Source:ZFIN;Acc:ZDB-GENE-040624-5]
63. boc ENSDARG00000074335 4832 1.722 - 0.827 - - - - - 0.895 - BOC cell adhesion associated, oncogene regulated [Source:ZFIN;Acc:ZDB-GENE-030131-6560]
64. cbx5 ENSDARG00000061187 24026 1.717 - - - - 0.879 0.838 - - - chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
65. gsk3b ENSDARG00000017803 3438 1.714 - 0.970 - - - - 0.744 - - glycogen synthase kinase 3 beta [Source:ZFIN;Acc:ZDB-GENE-990714-4]
66. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.712 - - - - - - - 0.885 0.827 structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
67. gpm6ab ENSDARG00000004621 5825 1.71 - - - - 0.923 - - - 0.787 glycoprotein M6Ab [Source:ZFIN;Acc:ZDB-GENE-030710-8]
68. puf60b ENSDARG00000001241 13827 1.703 - - - - - - - 0.959 0.744 poly-U binding splicing factor b [Source:ZFIN;Acc:ZDB-GENE-040625-116]
69. maf1 ENSDARG00000013122 3365 1.702 - - - - - - 0.794 0.908 - MAF1 homolog, negative regulator of RNA polymerase III [Source:ZFIN;Acc:ZDB-GENE-040426-2788]
70. nae1 ENSDARG00000011301, ENSDARG00000111542 1505 1.701 - - - - - - - 0.968 0.733 nedd8 activating enzyme E1 subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1552]
71. nkain1 ENSDARG00000006859 1961 1.699 - 0.986 - - - - - - 0.713 sodium/potassium transporting ATPase interacting 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1472]
72. psmd11a ENSDARG00000060150 4529 1.699 - 0.984 - - - - - - 0.715 proteasome 26S subunit, non-ATPase 11a [Source:ZFIN;Acc:ZDB-GENE-030131-2711]
73. smarce1 ENSDARG00000016871 9628 1.697 - 0.976 - - - - 0.721 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-967]
74. ckap5 ENSDARG00000102674 5068 1.696 - - - - 0.960 0.736 - - - cytoskeleton associated protein 5 [Source:ZFIN;Acc:ZDB-GENE-051120-174]
75. si:ch211-197h24.6 ENSDARG00000091631 1933 1.693 - - - - 0.957 - - - 0.736 si:ch211-197h24.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1361]
76. skp2 ENSDARG00000004937, ENSDARG00000114929 1584 1.693 - - - - - - - 0.951 0.742 S-phase kinase-associated protein 2, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-030219-158]
77. nadl1.1 1200 1.692 - - - - - - - 0.950 0.742 neural adhesion molecule L1.1, transcript variant X1
78. ahsa1l ahsa1l 2366 1.692 - 0.984 0.708 - - - - - -
79. DVL3 1098 1.689 - - - - - - - 0.963 0.726 dishevelled segment polarity protein 3
80. tes ENSDARG00000051857 2020 1.687 - 0.982 - - - 0.705 - - - testis derived transcript (3 LIM domains) [Source:ZFIN;Acc:ZDB-GENE-040718-59]
81. suco ENSDARG00000016532 1609 1.686 - - - - - 0.721 - 0.965 - SUN domain containing ossification factor [Source:ZFIN;Acc:ZDB-GENE-030131-2941]
82. cdk16_1 ENSDARG00000032072 2031 1.685 - - - - - 0.747 - 0.938 - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
83. asna1 ENSDARG00000018190 5253 1.684 - 0.981 - - - 0.703 - - - arsA arsenite transporter, ATP-binding, homolog 1 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-040625-120]
84. BX682552.2 BX682552.2 1427 1.682 - - - - - - 0.812 0.870 -
85. IM:7163548 IM:7163548 6540 1.682 - - - - 0.927 - - 0.755 -
86. dido1 ENSDARG00000057940 3819 1.681 - - 0.752 - - - - 0.929 - death inducer-obliterator 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6117]
87. minos1 ENSDARG00000101619 5273 1.679 - - - - 0.915 - - 0.764 - mitochondrial inner membrane organizing system 1 [Source:ZFIN;Acc:ZDB-GENE-060825-325]
88. ppp6r3 ENSDARG00000013379 2912 1.677 - - - - - - - 0.933 0.744 protein phosphatase 6, regulatory subunit 3 [Source:ZFIN;Acc:ZDB-GENE-030131-3251]
89. myef2 ENSDARG00000059398 6050 1.675 - - - - - - - 0.854 0.821 myelin expression factor 2 [Source:ZFIN;Acc:ZDB-GENE-051120-114]
90. stx6 ENSDARG00000042742, ENSDARG00000115635 1208 1.673 - - - - 0.958 - - - 0.715 syntaxin 6 [Source:ZFIN;Acc:ZDB-GENE-030131-858]
91. mcm5 ENSDARG00000019507 6407 1.673 - - - - 0.816 - - - 0.857 minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
92. hmgb3a ENSDARG00000056725 15668 1.673 - - - - - - - 0.916 0.757 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
93. actr1 ENSDARG00000011611 3879 1.672 - - - - 0.935 - 0.737 - - ARP1 actin related protein 1, centractin [Source:ZFIN;Acc:ZDB-GENE-040426-2695]
94. mrgbp ENSDARG00000028894, ENSDARG00000110790 1316 1.672 - - - - 0.961 - - - 0.711 MRG/MORF4L binding protein [Source:ZFIN;Acc:ZDB-GENE-040426-1698]
95. cadm3 ENSDARG00000057013 1545 1.67 - - - - - - - 0.944 0.726 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]
96. dnaja2l ENSDARG00000010745 2367 1.668 - - - - - - - 0.901 0.767 DnaJ (Hsp40) homolog, subfamily A, member 2, like [Source:ZFIN;Acc:ZDB-GENE-030131-2884]
97. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.668 - - - 0.708 0.960 - - - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
98. dld ENSDARG00000020219 4928 1.667 - - - - 0.955 - - - 0.712 deltaD [Source:ZFIN;Acc:ZDB-GENE-990415-47]
99. arhgap11a ENSDARG00000100019 1642 1.667 - - - - 0.953 - - - 0.714 Rho GTPase activating protein 11A [Source:ZFIN;Acc:ZDB-GENE-040426-2562]
100. stag2b ENSDARG00000053668, ENSDARG00000109728 7193 1.666 - - - - 0.924 - - - 0.742 stromal antigen 2b [Source:ZFIN;Acc:ZDB-GENE-030131-2785]

There are 1497 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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