Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top1l

Gene Name Gene ID Reads Annotation
top1l ENSDARG00000070545 40529 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]










Genes with expression patterns similar to top1l

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top1l ENSDARG00000070545 40529 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 DNA topoisomerase I, like [Source:ZFIN;Acc:ZDB-GENE-060616-217]
2. tubb5 ENSDARG00000037997 18691 3.33 - - 0.711 0.891 - - 0.729 - 0.999 tubulin, beta 5 [Source:ZFIN;Acc:ZDB-GENE-031110-4]
3. ilf3b ENSDARG00000105177 9473 3.13 - - 0.709 0.771 - - 0.810 0.840 - interleukin enhancer binding factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-587]
4. khdrbs1a ENSDARG00000052856 53666 2.599 - - 0.819 - - 0.921 - 0.859 - KH domain containing, RNA binding, signal transduction associated 1a [Source:ZFIN;Acc:ZDB-GENE-000210-25]
5. mcm7 ENSDARG00000101180 12417 2.598 - - - 0.819 - - 0.782 - 0.997 minichromosome maintenance complex component 7 [Source:ZFIN;Acc:ZDB-GENE-020419-27]
6. hnrnpub ENSDARG00000004735 16496 2.466 - - - 0.882 - - 0.847 0.737 - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
7. tia1 ENSDARG00000052536, ENSDARG00000114478 4392 2.459 - - - 0.884 - - 0.787 0.788 - TIA1 cytotoxic granule-associated RNA binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-1506]
8. nucks1a ENSDARG00000078473 28285 2.444 0.852 - - - 0.716 - - 0.876 - nuclear casein kinase and cyclin-dependent kinase substrate 1a [Source:ZFIN;Acc:ZDB-GENE-040912-175]
9. whsc1l1 8544 2.411 - - - 0.710 - - 0.856 0.845 - Wolf-Hirschhorn syndrome candidate 1-like 1, transcript variant X2
10. fam60al 2846 2.401 - - - 0.743 - - 0.811 0.847 - family with sequence similarity 60, member A, like
11. wu:fq41a10 wu:fq41a10 7009 2.394 - - 0.815 0.840 - - 0.739 - -
12. sfpq ENSDARG00000011564, ENSDARG00000115611 15626 2.391 - - - 0.791 - - 0.881 0.719 - splicing factor proline/glutamine-rich [Source:ZFIN;Acc:ZDB-GENE-040426-2452]
13. rrm1 ENSDARG00000014017 7296 2.369 - - - 0.838 0.751 - 0.780 - - ribonucleotide reductase M1 polypeptide [Source:ZFIN;Acc:ZDB-GENE-990415-247]
14. hmgb1b ENSDARG00000030479 10398 2.361 - - - - 0.743 - 0.854 0.764 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
15. nova2 ENSDARG00000017673 7685 2.358 - - - 0.889 0.744 - 0.725 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
16. carm1 ENSDARG00000018698 5599 2.343 - - 0.863 0.704 - - 0.776 - - coactivator-associated arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040724-77]
17. tmem35 ENSDARG00000052567 5685 2.32 - - - 0.735 - - 0.746 0.839 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
18. snrpc ENSDARG00000009871 9567 2.31 - - - 0.762 - 0.775 0.773 - - small nuclear ribonucleoprotein polypeptide C [Source:ZFIN;Acc:ZDB-GENE-020419-26]
19. TUBA1A ENSDARG00000001889 25294 2.301 - - 0.713 0.853 - - 0.735 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
20. lrrn1 ENSDARG00000060115, ENSDARG00000115960 5175 2.299 - - - 0.878 - - 0.713 0.708 - leucine rich repeat neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-071126-1]
21. mta2 ENSDARG00000013031 2932 2.277 - - - 0.795 - - 0.749 0.733 - metastasis associated 1 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4803]
22. MKI67 ENSDARG00000091150 11038 2.265 - - - 0.708 0.724 - 0.833 - - marker of proliferation Ki-67 [Source:ZFIN;Acc:ZDB-GENE-030131-9771]
23. cpsf6 ENSDARG00000018618 3923 2.263 - - 0.836 0.725 - - 0.702 - - cleavage and polyadenylation specific factor 6 [Source:ZFIN;Acc:ZDB-GENE-030131-5277]
24. fscn1a ENSDARG00000059680 3999 2.257 - - - 0.778 - - 0.737 0.742 - fascin actin-bundling protein 1a [Source:ZFIN;Acc:ZDB-GENE-031009-1]
25. nrarpb ENSDARG00000018958 6225 2.237 - - - 0.745 - - 0.736 0.756 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
26. zswim5 ENSDARG00000055900 4243 2.234 - - - 0.718 - - 0.701 0.815 - zinc finger, SWIM-type containing 5 [Source:ZFIN;Acc:ZDB-GENE-030925-30]
27. apex1 ENSDARG00000045843 6345 2.23 - - - 0.729 - - 0.736 0.765 - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
28. ZFHX3 ENSDARG00000103057 7759 2.227 - - - 0.773 - - 0.738 0.716 - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
29. cspg5a ENSDARG00000069981 1699 2.215 - - - 0.789 - - 0.707 0.719 - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
30. TAF15 ENSDARG00000070019 5102 2.191 - - - 0.769 - - 0.718 0.704 - TAF15 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-061215-102]
31. stmn1b ENSDARG00000033655 9491 2.183 - - - 0.731 - - 0.705 0.747 - stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
32. pcdh1gc5 ENSDARG00000104826 10052 2.164 - - - 0.701 - - 0.727 0.736 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
33. kirrela 1170 2.146 - - - 0.707 - - 0.733 0.706 - kin of IRRE like a, transcript variant X2
34. tle2 5014 1.789 - - - 0.873 - - 0.916 - - transducin-like enhancer of split 2 (E(sp1) homolog, Drosophila), transcript variant X4
35. hmgb2b ENSDARG00000053990 11519 1.787 - - - - - 0.861 0.926 - - high mobility group box 2b [Source:ZFIN;Acc:ZDB-GENE-040912-122]
36. h3f3a 66671 1.781 - - - - - - 0.919 0.862 - H3 histone, family 3A, transcript variant X1
37. smarcd1 ENSDARG00000019004 6028 1.772 - - - 0.879 - - 0.893 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1835]
38. hnrnpab hnrnpab 72354 1.766 - - - - - - - 0.780 0.986
39. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.735 - - - 0.918 - - 0.817 - - ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
40. dlb ENSDARG00000004232 5120 1.734 - - 0.874 0.860 - - - - - deltaB [Source:ZFIN;Acc:ZDB-GENE-980526-114]
41. si:dkey-19e4.5 ENSDARG00000089886 2562 1.731 - - 0.840 - - - 0.891 - - si:dkey-19e4.5 [Source:ZFIN;Acc:ZDB-GENE-030131-1852]
42. HNRNPA2B1 HNRNPA2B1 14997 1.713 - - - 0.790 - - 0.923 - -
43. prep ENSDARG00000057151 3016 1.709 - - 0.833 - - - 0.876 - - prolyl endopeptidase [Source:ZFIN;Acc:ZDB-GENE-050522-14]
44. wu:fc51f04 wu:fc51f04 7074 1.706 - - - 0.840 - 0.866 - - -
45. bcl11ab ENSDARG00000063153 3032 1.705 - - - 0.868 - - 0.837 - - B cell CLL/lymphoma 11Ab [Source:ZFIN;Acc:ZDB-GENE-061009-4]
46. acin1a ENSDARG00000054290 14023 1.701 - - - 0.838 - - 0.863 - - apoptotic chromatin condensation inducer 1a [Source:ZFIN;Acc:ZDB-GENE-030616-583]
47. rps18 ENSDARG00000100392 64615 1.699 - - - - - - 0.709 - 0.990 ribosomal protein S18 [Source:ZFIN;Acc:ZDB-GENE-020419-20]
48. ash2l ENSDARG00000060392 4916 1.683 - - - 0.806 - - 0.877 - - ash2 like, histone lysine methyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-030131-494]
49. ube2i ube2i 13024 1.671 - - - 0.768 - - 0.903 - -
50. psmb4 ENSDARG00000054696 8100 1.669 - - - - - 0.850 0.819 - - proteasome subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-050417-333]
51. ssbp4 ENSDARG00000056483 10196 1.666 - - - - - - 0.828 0.838 - single stranded DNA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-469]
52. znf865 ENSDARG00000036698 15532 1.663 - - - 0.862 - - 0.801 - - zinc finger protein 865 [Source:ZFIN;Acc:ZDB-GENE-060503-896]
53. GATAD2B ENSDARG00000005834 3855 1.657 - - 0.829 - - - 0.828 - - GATA zinc finger domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-060503-655]
54. zc3h13 ENSDARG00000037177, ENSDARG00000113331 2662 1.655 - - 0.844 - - - 0.811 - - zinc finger CCCH-type containing 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1619]
55. snrpf ENSDARG00000105037 10241 1.652 - - - 0.777 - - 0.875 - - small nuclear ribonucleoprotein polypeptide F [Source:ZFIN;Acc:ZDB-GENE-040930-9]
56. prpf38b ENSDARG00000053101 1785 1.646 - - 0.824 - - - 0.822 - - pre-mRNA processing factor 38B [Source:ZFIN;Acc:ZDB-GENE-040426-2878]
57. kif15 ENSDARG00000012073 1936 1.644 - - - 0.848 - - 0.796 - - kinesin family member 15 [Source:ZFIN;Acc:ZDB-GENE-050622-16]
58. ncalda ENSDARG00000070688 5069 1.643 - - 0.852 - - - 0.791 - - neurocalcin delta a [Source:ZFIN;Acc:ZDB-GENE-080220-28]
59. tgif1 ENSDARG00000059337 4020 1.636 - - - 0.773 - - 0.863 - - TGFB-induced factor homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-030131-475]
60. smarca4 smarca4 9726 1.636 - - - 0.791 - - 0.845 - -
61. znf292b ENSDARG00000043973 3791 1.632 - - 0.848 - - - 0.784 - - zinc finger protein 292b [Source:ZFIN;Acc:ZDB-GENE-030131-9559]
62. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 1.632 - - - 0.866 - - 0.766 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
63. kpnb3 ENSDARG00000040245 7967 1.629 - - - 0.844 - - 0.785 - - karyopherin (importin) beta 3 [Source:ZFIN;Acc:ZDB-GENE-030424-2]
64. zgc:112425 zgc:112425 293873 1.628 - - - 0.753 - - - 0.875 -
65. mcm5 ENSDARG00000019507 6407 1.627 - - 0.784 0.843 - - - - - minichromosome maintenance complex component 5 [Source:ZFIN;Acc:ZDB-GENE-021209-1]
66. atoh1b ENSDARG00000099564 494 1.627 - - 0.838 0.789 - - - - - atonal bHLH transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-041201-1]
67. pfn2l ENSDARG00000012682 21690 1.627 - - - 0.739 - - 0.888 - - profilin 2 like [Source:ZFIN;Acc:ZDB-GENE-030131-34]
68. hcfc1b ENSDARG00000012519 3633 1.626 - - - 0.777 - - 0.849 - - host cell factor C1b [Source:ZFIN;Acc:ZDB-GENE-030131-2411]
69. hnrnpm ENSDARG00000061735 19428 1.624 - - - 0.838 - - - 0.786 - heterogeneous nuclear ribonucleoprotein M [Source:ZFIN;Acc:ZDB-GENE-030131-6898]
70. rpl22 ENSDARG00000070437 56743 1.618 0.845 - - - - - 0.773 - - ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-051113-276]
71. AL844567.1 AL844567.1 1605 1.614 - - 0.847 0.767 - - - - -
72. ewsr1b ENSDARG00000020465, ENSDARG00000117011 10260 1.613 - - - 0.771 - - 0.842 - - EWS RNA-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-030131-1600]
73. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.613 - - 0.797 - - - 0.816 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
74. puf60a ENSDARG00000032175 5618 1.611 - - - 0.774 - - 0.837 - - poly-U binding splicing factor a [Source:ZFIN;Acc:ZDB-GENE-030131-2891]
75. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 1.611 - - 0.826 - - - 0.785 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
76. akirin2 ENSDARG00000058729 13245 1.606 - - - - - - 0.808 0.798 - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]
77. aspm ENSDARG00000103754 5708 1.606 - - - 0.765 - - 0.841 - - abnormal spindle microtubule assembly [Source:ZFIN;Acc:ZDB-GENE-050208-620]
78. PLEKHG4 ENSDARG00000075964 2860 1.604 - - - - - 0.788 0.816 - - pleckstrin homology domain containing, family G (with RhoGef domain) member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-4824]
79. tmpob ENSDARG00000022978 8121 1.604 - - - 0.769 - - 0.835 - - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
80. arnt2 ENSDARG00000103697 5731 1.603 - - - - - - 0.804 0.799 - aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
81. cldn5a ENSDARG00000043716 3865 1.601 - - 0.820 - - - 0.781 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
82. zmiz1a ENSDARG00000074502 3920 1.6 - - 0.860 - - - 0.740 - - zinc finger, MIZ-type containing 1a [Source:ZFIN;Acc:ZDB-GENE-080220-27]
83. ddx39ab ENSDARG00000015111 11619 1.598 - - - - - - 0.897 0.701 - DEAD (Asp-Glu-Ala-Asp) box polypeptide 39Ab [Source:ZFIN;Acc:ZDB-GENE-040426-2902]
84. faf1 ENSDARG00000022418 2922 1.597 - - 0.818 - - - 0.779 - - Fas (TNFRSF6) associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2863]
85. atrx ENSDARG00000042236, ENSDARG00000112921, ENSDARG00000116878 7922 1.597 - - - 0.799 - - 0.798 - - alpha thalassemia/mental retardation syndrome X-linked homolog (human) [Source:ZFIN;Acc:ZDB-GENE-030912-11]
86. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 1.595 - - - 0.785 - - 0.810 - - C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
87. syncripl ENSDARG00000026723 3889 1.595 - - 0.808 - - - 0.787 - - synaptotagmin binding, cytoplasmic RNA interacting protein, like [Source:ZFIN;Acc:ZDB-GENE-030131-3104]
88. usp7 ENSDARG00000073710 7017 1.594 - - - 0.773 - - 0.821 - - ubiquitin specific peptidase 7 (herpes virus-associated) [Source:ZFIN;Acc:ZDB-GENE-030131-3656]
89. fubp1 ENSDARG00000029248 15259 1.594 - - - 0.851 - - - 0.743 - far upstream element (FUSE) binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2159]
90. cdca8 ENSDARG00000043137 7541 1.592 - - - 0.761 - - 0.831 - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
91. kif22 ENSDARG00000102624 3694 1.59 - - - 0.715 - - 0.875 - - kinesin family member 22 [Source:ZFIN;Acc:ZDB-GENE-080204-34]
92. srsf3a ENSDARG00000025397, ENSDARG00000100815 11622 1.589 - - - - - - 0.871 0.718 - serine/arginine-rich splicing factor 3a [Source:ZFIN;Acc:ZDB-GENE-030616-631]
93. kdm1a ENSDARG00000060679 6152 1.587 - - - 0.780 - - 0.807 - - lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
94. her15.1 ENSDARG00000054560, ENSDARG00000054562 1500 1.587 - - 0.870 0.717 - - - - - hairy and enhancer of split-related 15, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-030707-2]
95. col4a6 ENSDARG00000052061 8636 1.583 0.774 - - - - - 0.809 - - collagen, type IV, alpha 6 [Source:ZFIN;Acc:ZDB-GENE-101001-2]
96. pou3f3a ENSDARG00000042032 2835 1.583 - - - 0.850 - - 0.733 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
97. uhrf1 ENSDARG00000103409 3282 1.578 - - - 0.739 - - - 0.839 - ubiquitin-like with PHD and ring finger domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2039]
98. sf1 ENSDARG00000008188 5142 1.577 - - - 0.773 - - 0.804 - - splicing factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2492]
99. rps6kb1b ENSDARG00000058230, ENSDARG00000115202 2565 1.576 - - - - - 0.767 0.809 - - ribosomal protein S6 kinase b, polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2038]
100. polr2j ENSDARG00000035146 1493 1.575 - - 0.836 - - - 0.739 - - polymerase (RNA) II (DNA directed) polypeptide J [Source:ZFIN;Acc:ZDB-GENE-050522-120]

There are 1448 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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