Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for top1

Gene Name Gene ID Reads Annotation
top1 ENSDARG00000086775 8 DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]










Genes with expression patterns similar to top1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. top1 ENSDARG00000086775 8 5 - - 1.000 1.000 1.000 - - 1.000 1.000 DNA topoisomerase I [Source:ZFIN;Acc:ZDB-GENE-030131-5390]
2. zgc:194252 ENSDARG00000057142 11 1 - - - - - - - 1.000 - zgc:194252 [Source:ZFIN;Acc:ZDB-GENE-081022-86]
3. si:ch211-187g4.1 ENSDARG00000094350 0 1 - - - - - - - 1.000 - si:ch211-187g4.1 [Source:ZFIN;Acc:ZDB-GENE-070912-161]
4. si:ch211-254n4.1 si:ch211-254n4.1 36 1 - - - - 1.000 - - - -
5. iffo1a ENSDARG00000062976 5 1 - - - - - - - 1.000 - intermediate filament family orphan 1a [Source:ZFIN;Acc:ZDB-GENE-060503-418]
6. ENSDARG00000092956 ENSDARG00000092956 1 1 - - - - - - - 1.000 -
7. CD37 ENSDARG00000075515, ENSDARG00000111538 11 1 - - - - 1.000 - - - - CD37 molecule [Source:ZFIN;Acc:ZDB-GENE-070820-17]
8. zgc:193682 zgc:193682 15 1 - - - - - - - 1.000 -
9. FRMD1_1 FRMD1_1 3 1 - - - - - - - 1.000 -
10. csf1rb ENSDARG00000053624 9 1 - - - - - - - 1.000 - colony stimulating factor 1 receptor, b [Source:ZFIN;Acc:ZDB-GENE-091118-1]
11. si:ch211-209j10.6 ENSDARG00000093317 126 1 - - - - 1.000 - - - - si:ch211-209j10.6 [Source:ZFIN;Acc:ZDB-GENE-090311-44]
12. CU856140.1 CU856140.1 4316 1 - - - - 1.000 - - - -
13. si:dkey-283b1.7 ENSDARG00000053460 10 1 - - - - 1.000 - - - - si:dkey-283b1.7 [Source:ZFIN;Acc:ZDB-GENE-120215-126]
14. SLC4A10 SLC4A10 1 1 - - - - - - - 1.000 -
15. fank1 ENSDARG00000039657 9 1 - - - - - - - 1.000 - fibronectin type III and ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130613-3]
16. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 1 - - - - - - - 1.000 - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]
17. ccdc14 ENSDARG00000098734 3 1 - - - - - - - 1.000 - coiled-coil domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-120215-134]
18. baiap2l1a ENSDARG00000029305 30 1 - - - - - - - 1.000 - BAI1-associated protein 2-like 1a [Source:ZFIN;Acc:ZDB-GENE-031201-1]
19. vent ENSDARG00000100483 74 1 - - - - - - - 1.000 - ventral expressed homeobox [Source:ZFIN;Acc:ZDB-GENE-010108-2]
20. si:ch211-202n12.2 ENSDARG00000096665 4 1 - - - - 1.000 - - - - si:ch211-202n12.2 [Source:ZFIN;Acc:ZDB-GENE-121214-12]
21. pth1ra ENSDARG00000020957 0 1 - - - - - - - 1.000 - parathyroid hormone 1 receptor a [Source:ZFIN;Acc:ZDB-GENE-991123-8]
22. BX511061.2 BX511061.2 30 1 - - - - - - - 1.000 -
23. CR318595.2 CR318595.2 17 1 - - - 1.000 - - - - -
24. ST3GAL1 ENSDARG00000079654 2 1 - - - - - - - 1.000 - ST3 beta-galactoside alpha-2,3-sialyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-060321-1]
25. tuba7l ENSDARG00000104643 33 1 - - - - - - - 1.000 - tubulin, alpha 7 like [Source:ZFIN;Acc:ZDB-GENE-040704-78]
26. IL17RA IL17RA 1 1 - - - - - - - 1.000 -
27. CABZ01041604.1 ENSDARG00000059854 35 1 - - - - 1.000 - - - - E3 ubiquitin-protein ligase RNF182-like [Source:NCBI gene;Acc:797048]
28. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - - - - - 1.000 - zgc:172218 [Source:NCBI gene;Acc:793798]
29. si:ch211-261b22.2 si:ch211-261b22.2 1 1 - - - - - - - 1.000 -
30. zgc:113355 zgc:113355 2 1 - - - - - - - 1.000 -
31. anpepb ENSDARG00000103878 8 1 - - - - - - - 1.000 - alanyl (membrane) aminopeptidase b [Source:ZFIN;Acc:ZDB-GENE-030131-1253]
32. larsa ENSDARG00000090988 26 1 - - - - - - - 1.000 - leucyl-tRNA synthetase a [Source:ZFIN;Acc:ZDB-GENE-110411-16]
33. si:dkey-40h20.1 ENSDARG00000095252 5 1 - - - - - - - 1.000 - si:dkey-40h20.1 [Source:ZFIN;Acc:ZDB-GENE-091113-44]
34. cryabb ENSDARG00000101380, ENSDARG00000109545 8 1 - - - - 1.000 - - - - crystallin, alpha B, b [Source:ZFIN;Acc:ZDB-GENE-040718-419]
35. PEG3_39 PEG3_39 3 1 - - - - - - - 1.000 -
36. si:ch211-209l18.5 si:ch211-209l18.5 1 1 - - - - - - - 1.000 -
37. si:ch211-214p13.9 ENSDARG00000091411 2 1 - - - - - - - 1.000 - si:ch211-214p13.9 [Source:ZFIN;Acc:ZDB-GENE-060503-213]
38. cabp1b ENSDARG00000033411 2 1 - - - - - - - 1.000 - calcium binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040718-111]
39. fgfr1bl ENSDARG00000075027, ENSDARG00000104015 2 1 - - - - - - - 1.000 - fibroblast growth factor receptor 1b, like [Source:ZFIN;Acc:ZDB-GENE-091204-406]
40. si:rp71-36a1.3 ENSDARG00000071662 2 1 - - - - - - - 1.000 - si:rp71-36a1.3 [Source:ZFIN;Acc:ZDB-GENE-050208-566]
41. taf4b ENSDARG00000075732 3 1 - - - - - - - 1.000 - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
42. U6_33 U6_33 0 1 - - - - - - - 1.000 -
43. nphs2 ENSDARG00000042850 31 0.985 - - - - - - - 0.985 - nephrosis 2, idiopathic, steroid-resistant (podocin) [Source:ZFIN;Acc:ZDB-GENE-051102-2]
44. si:dkey-33o22.1 ENSDARG00000087639 21 0.975 - - - 0.975 - - - - - si:dkey-33o22.1 [Source:ZFIN;Acc:ZDB-GENE-091204-221]
45. MFAP4 ENSDARG00000090783 8 0.918 - - - - 0.918 - - - - microfibril associated protein 4 [Source:ZFIN;Acc:ZDB-GENE-040426-2246]
46. ocstamp ENSDARG00000022139, ENSDARG00000114094 12 0.914 - - - 0.914 - - - - - osteoclast stimulatory transmembrane protein [Source:ZFIN;Acc:ZDB-GENE-050327-65]
47. cart4 ENSDARG00000070142 55 0.908 - - - - 0.908 - - - - cocaine- and amphetamine-regulated transcript 4 [Source:ZFIN;Acc:ZDB-GENE-060503-863]
48. ODF2 ODF2 6 0.893 - - - - - - - 0.893 -
49. BX072576.1 ENSDARG00000078204 12 0.893 - - - - - - - 0.893 - beta-2 adrenergic receptor-like [Source:NCBI gene;Acc:101885642]
50. ppp1r27 ppp1r27 18 0.887 - - - - - - - 0.887 -
51. nphs1 ENSDARG00000060758 5 0.887 - - - - - - - 0.887 - nephrosis 1, congenital, Finnish type (nephrin) [Source:ZFIN;Acc:ZDB-GENE-051102-1]
52. necab1 ENSDARG00000056566, ENSDARG00000111028 26 0.878 - - - 0.878 - - - - - N-terminal EF-hand calcium binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-395]
53. calhm1 ENSDARG00000077021 2 0.871 - - - - 0.871 - - - - calcium homeostasis modulator 1 [Source:ZFIN;Acc:ZDB-GENE-081107-71]
54. tlr5a ENSDARG00000044415 3 0.871 - - - - 0.871 - - - - toll-like receptor 5a [Source:ZFIN;Acc:ZDB-GENE-040219-14]
55. U2_2 U2_2 2 0.871 - - - - 0.871 - - - -
56. ZBED1_4 ZBED1_4 2 0.871 - - - - 0.871 - - - -
57. hpse ENSDARG00000063634, ENSDARG00000112827 35 0.871 - - - - 0.871 - - - - heparanase [Source:ZFIN;Acc:ZDB-GENE-041111-200]
58. CR391991.2 ENSDARG00000103510 0 0.871 - - - - 0.871 - - - -
59. BX005106.1 BX005106.1 22 0.871 - - - - 0.871 - - - -
60. scospondin ENSDARG00000067859 4 0.871 - - - - 0.871 - - - - subcommissural organ spondin [Source:ZFIN;Acc:ZDB-GENE-051114-1]
61. si:dkey-47k20.5 ENSDARG00000115763 0 0.871 - - - - 0.871 - - - - si:dkey-47k20.5 [Source:ZFIN;Acc:ZDB-GENE-060503-77]
62. CABZ01065246.2 CABZ01065246.2 45 0.871 - - - - 0.871 - - - -
63. si:ch211-53m15.1 si:ch211-53m15.1 28 0.871 - - - - 0.871 - - - -
64. CABZ01007222.1 CABZ01007222.1 78 0.871 - - - - 0.871 - - - -
65. BX569789.4 BX569789.4 3 0.871 - - - - 0.871 - - - -
66. U1_11 U1_11 0 0.871 - - - - 0.871 - - - -
67. LPXN ENSDARG00000079315 12 0.871 - - - - 0.871 - - - - leupaxin [Source:ZFIN;Acc:ZDB-GENE-081105-159]
68. si:dkey-233e3.6 si:dkey-233e3.6 1 0.871 - - - - 0.871 - - - -
69. ATG16L2 ENSDARG00000043238, ENSDARG00000109384 0 0.871 - - - - 0.871 - - - - ATG16 autophagy related 16-like 2 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060503-197]
70. CNTD1 2 0.871 - - - - 0.871 - - - - cyclin N-terminal domain containing 1
71. U1 U1 0 0.871 - - - - 0.871 - - - -
72. U1_36 U1_36 0 0.871 - - - - 0.871 - - - -
73. GGT5 GGT5 1 0.871 - - - - 0.871 - - - -
74. si:dkey-109m8.1 si:dkey-109m8.1 2 0.871 - - - - 0.871 - - - -
75. si:ch73-196i15.4 si:ch73-196i15.4 0 0.871 - - - - 0.871 - - - -
76. mep1a.1 ENSDARG00000029747 4 0.871 - - - - 0.871 - - - - meprin A, alpha (PABA peptide hydrolase), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-041001-209]
77. CMA1_7 CMA1_7 1 0.871 - - - - 0.871 - - - -
78. si:dkey-25i10.3 si:dkey-25i10.3 5 0.871 - - - - 0.871 - - - -
79. si:ch211-24n20.3 si:ch211-24n20.3 0 0.871 - - - - 0.871 - - - -
80. si:ch211-232m10.6 ENSDARG00000070931 2 0.871 - - - - 0.871 - - - - si:ch211-232m10.6 [Source:ZFIN;Acc:ZDB-GENE-060503-879]
81. CABZ01080134.1 CABZ01080134.1 2 0.871 - - - - 0.871 - - - -
82. si:ch211-73m21.1 ENSDARG00000096491 10 0.871 - - - - 0.871 - - - - si:ch211-73m21.1 [Source:ZFIN;Acc:ZDB-GENE-120709-61]
83. CABZ01039424.1 CABZ01039424.1 15 0.871 - - - - 0.871 - - - -
84. si:ch73-289h5.4 ENSDARG00000077488 0 0.871 - - - - 0.871 - - - - si:ch73-289h5.4 [Source:ZFIN;Acc:ZDB-GENE-110913-10]
85. ighv8-3 ENSDARG00000114819 0 0.871 - - - - 0.871 - - - - immunoglobulin heavy variable 8-3 [Source:ZFIN;Acc:ZDB-GENE-040514-28]
86. BX323450.2 BX323450.2 2 0.871 - - - - 0.871 - - - -
87. BX901974.1 ENSDARG00000067592 2 0.871 - - - - 0.871 - - - -
88. SNORA16_1 SNORA16_1 1 0.871 - - - - 0.871 - - - -
89. TMEM132A ENSDARG00000105005 4 0.871 - - - - 0.871 - - - - transmembrane protein 132A [Source:ZFIN;Acc:ZDB-GENE-140106-237]
90. sox32 ENSDARG00000100591 2 0.871 - - - - 0.871 - - - - SRY (sex determining region Y)-box 32 [Source:ZFIN;Acc:ZDB-GENE-011026-1]
91. HYKK_1 HYKK_1 4 0.871 - - - - 0.871 - - - -
92. cbln9 ENSDARG00000030254, ENSDARG00000111671 0 0.871 - - - - 0.871 - - - - cerebellin 9 [Source:ZFIN;Acc:ZDB-GENE-040724-34]
93. mvb12ba ENSDARG00000091619 18 0.871 - - - - 0.871 - - - - multivesicular body subunit 12Ba [Source:ZFIN;Acc:ZDB-GENE-060929-372]
94. si:ch211-203b20.7 ENSDARG00000053036, ENSDARG00000113237 0 0.871 - - - - 0.871 - - - - si:ch211-203b20.7 [Source:ZFIN;Acc:ZDB-GENE-060503-302]
95. TRIM35 TRIM35 100 0.871 - - - - 0.871 - - - -
96. tbc1d20 ENSDARG00000032298 1 0.871 - - - - 0.871 - - - - TBC1 domain family, member 20 [Source:ZFIN;Acc:ZDB-GENE-050626-61]
97. CR558302.1 ENSDARG00000115782 0 0.871 - - - - 0.871 - - - -
98. si:ch211-125e6.6 si:ch211-125e6.6 0 0.871 - - - - 0.871 - - - -
99. sebox ENSDARG00000042526 2 0.871 - - - - 0.871 - - - - SEBOX homeobox [Source:ZFIN;Acc:ZDB-GENE-021206-4]
100. arl10 37 0.871 - - - - 0.871 - - - - ADP-ribosylation factor-like 10

There are 194 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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