Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tom1

Gene Name Gene ID Reads Annotation
tom1 ENSDARG00000104581 1457 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]










Genes with expression patterns similar to tom1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tom1 ENSDARG00000104581 1457 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
2. tm9sf3 ENSDARG00000028748, ENSDARG00000111288 4546 2.689 0.887 - - - - 0.876 - 0.926 - transmembrane 9 superfamily member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2714]
3. rwdd ENSDARG00000068256 964 2.623 0.898 - - - - 0.885 - - 0.840 RWD domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-041010-61]
4. clic1 ENSDARG00000103340 2235 2.56 0.913 - - - - - 0.746 0.901 - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
5. elovl6l ENSDARG00000038639 1184 2.546 0.753 - - - - 0.858 - 0.935 - ELOVL family member 6, elongation of long chain fatty acids like [Source:ZFIN;Acc:ZDB-GENE-031110-3]
6. SH3D21 ENSDARG00000099448 1726 2.522 0.843 - - - - 0.879 0.800 - - SH3 domain containing 21 [Source:ZFIN;Acc:ZDB-GENE-051120-57]
7. bcar1 ENSDARG00000056525 6563 2.509 - - - - - 0.872 0.701 0.936 - BCAR1, Cas family scaffold protein [Source:ZFIN;Acc:ZDB-GENE-030131-2774]
8. magt1 ENSDARG00000058062 3903 2.454 0.848 - - - - 0.877 0.729 - - magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3667]
9. ajuba ENSDARG00000077842 1152 2.451 0.910 - - - - 0.746 0.795 - - ajuba LIM protein [Source:ZFIN;Acc:ZDB-GENE-030131-9341]
10. pvrl1b 1645 2.43 - - - - - 0.885 0.773 - 0.772 poliovirus receptor-related 1b
11. xpo1a ENSDARG00000078041 3544 2.425 0.725 - - - - - 0.774 0.926 - exportin 1 (CRM1 homolog, yeast) a [Source:ZFIN;Acc:ZDB-GENE-050309-201]
12. tnfrsf1a ENSDARG00000018569 842 2.41 0.879 0.807 - 0.724 - - - - - tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
13. si:dkey-3h3.3 ENSDARG00000067718 225 1.901 - 0.950 - - - - - 0.951 - si:dkey-3h3.3 [Source:ZFIN;Acc:ZDB-GENE-060526-299]
14. osgn1 ENSDARG00000052279 5607 1.856 0.908 - - - - - - 0.948 - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
15. nr3c1 ENSDARG00000025032, ENSDARG00000112480, ENSDARG00000116957 2608 1.829 - - - - - 0.884 - 0.945 - nuclear receptor subfamily 3, group C, member 1 (glucocorticoid receptor) [Source:ZFIN;Acc:ZDB-GENE-050522-503]
16. pabpn1 ENSDARG00000045373 4876 1.806 - - - - - - - 0.968 0.838 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
17. LRP10 ENSDARG00000054539 1895 1.804 0.843 - - - - - - 0.961 - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
18. CABZ01057013.1 CABZ01057013.1 1308 1.803 - - - - - 0.913 - 0.890 -
19. map2k6 ENSDARG00000099184 8741 1.799 - - - - - 0.885 - 0.914 - mitogen-activated protein kinase kinase 6 [Source:ZFIN;Acc:ZDB-GENE-010202-3]
20. cx30.3 ENSDARG00000042707, ENSDARG00000116331 2399 1.784 - - - - - 0.929 0.855 - - connexin 30.3 [Source:ZFIN;Acc:ZDB-GENE-040406-1]
21. grp ENSDARG00000043074 747 1.774 0.895 - - - - 0.879 - - - gastrin-releasing peptide [Source:ZFIN;Acc:ZDB-GENE-060526-117]
22. snrnp200 ENSDARG00000077536, ENSDARG00000114486 4981 1.771 - - - - - 0.830 - 0.941 - small nuclear ribonucleoprotein 200 (U5) [Source:ZFIN;Acc:ZDB-GENE-081105-64]
23. gdap1l1 ENSDARG00000028628 233 1.769 0.902 - - - - 0.867 - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
24. arpc5a ENSDARG00000039142 5482 1.769 - - - - - 0.824 - 0.945 - actin related protein 2/3 complex, subunit 5A [Source:ZFIN;Acc:ZDB-GENE-030131-8448]
25. spryd7a ENSDARG00000052624 1059 1.764 0.904 - - - - - - - 0.860 SPRY domain containing 7a [Source:ZFIN;Acc:ZDB-GENE-040426-2713]
26. paxip1 ENSDARG00000005606 1417 1.762 - - - - - - - 0.956 0.806 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
27. MAN2A2 ENSDARG00000063101 922 1.761 - - - - - - - 0.920 0.841 mannosidase, alpha, class 2A, member 2 [Source:ZFIN;Acc:ZDB-GENE-110331-1]
28. casc5 1487 1.759 - - - - - 0.834 - 0.925 - cancer susceptibility candidate 5, transcript variant X3
29. IL17RD ENSDARG00000098359 2309 1.74 0.819 - - - - 0.921 - - - interleukin 17 receptor D [Source:ZFIN;Acc:ZDB-GENE-020320-5]
30. CU655970.1 CU655970.1 2123 1.739 0.931 - - - - - 0.808 - -
31. AIFM2 ENSDARG00000077549 1419 1.736 - - - - - - 0.796 0.940 - apoptosis-inducing factor, mitochondrion-associated, 2 [Source:ZFIN;Acc:ZDB-GENE-050506-76]
32. araf ENSDARG00000054533 1132 1.735 - - - - - - - 0.951 0.784 A-Raf proto-oncogene, serine/threonine kinase [Source:ZFIN;Acc:ZDB-GENE-050102-2]
33. ell ENSDARG00000000568 1404 1.732 - - - - - - - 0.934 0.798 elongation factor RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-030131-3946]
34. rabac1 ENSDARG00000004171 2708 1.728 - - - - - 0.824 - 0.904 - Rab acceptor 1 (prenylated) [Source:ZFIN;Acc:ZDB-GENE-040625-146]
35. pex13 ENSDARG00000071037 738 1.726 - - - - - 0.850 - - 0.876 peroxisomal biogenesis factor 13 [Source:ZFIN;Acc:ZDB-GENE-040426-1544]
36. si:dkey-193b15.6 si:dkey-193b15.6 1340 1.726 - - - - - 0.770 - 0.956 -
37. si:ch211-233a24.2 ENSDARG00000062330, ENSDARG00000110766, ENSDARG00000116929 622 1.724 - - - - - 0.908 0.816 - - si:ch211-233a24.2 [Source:ZFIN;Acc:ZDB-GENE-090313-98]
38. CARKD 1398 1.721 0.884 - - - - 0.837 - - - carbohydrate kinase domain containing, transcript variant X7
39. RNF145 RNF145 1364 1.719 - 0.763 - - - - - 0.956 -
40. usp49 ENSDARG00000000229 706 1.717 0.892 - - - - - - - 0.825 ubiquitin specific peptidase 49 [Source:ZFIN;Acc:ZDB-GENE-050208-484]
41. slc39a7 ENSDARG00000104451 6368 1.717 - - - - - 0.878 - 0.839 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
42. dusp7 ENSDARG00000101413 1307 1.715 - - - - - 0.800 - 0.915 - dual specificity phosphatase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5457]
43. ngly1 ENSDARG00000003205 733 1.714 - - - - - 0.878 - - 0.836 N-glycanase 1 [Source:ZFIN;Acc:ZDB-GENE-050522-535]
44. dhrs13a.2 ENSDARG00000111240 491 1.711 - - - - - 0.859 - - 0.852 dehydrogenase/reductase (SDR family) member 13a, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-040912-69]
45. C17H15orf57 C17H15orf57 1366 1.708 - - - - - 0.753 - 0.955 -
46. cldnf ENSDARG00000043133 1006 1.705 0.829 - - - - 0.876 - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
47. gid8b ENSDARG00000037589 2121 1.701 - - - - - 0.896 - - 0.805 GID complex subunit 8 homolog b (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030515-4]
48. phf14 ENSDARG00000061458 492 1.701 0.849 - - - - 0.852 - - - PHD finger protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-1796]
49. rbl1 ENSDARG00000008141 1217 1.695 0.876 - - 0.819 - - - - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
50. pcnxl3 pcnxl3 756 1.691 0.873 - - - - - - - 0.818
51. prss35 ENSDARG00000100691, ENSDARG00000109353 2333 1.687 0.904 - - - - - - - 0.783 protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
52. taz ENSDARG00000041421 985 1.687 - - - - - 0.829 - - 0.858 tafazzin [Source:ZFIN;Acc:ZDB-GENE-030131-684]
53. cxxc1l cxxc1l 1035 1.686 - 0.728 - - - - - 0.958 -
54. nudt17 ENSDARG00000008014 479 1.684 - - - - - - 0.702 0.982 - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
55. abca1a ENSDARG00000074635 1085 1.683 0.887 - - - - - - - 0.796 ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
56. wdfy4 ENSDARG00000077009 802 1.682 0.826 - - - - 0.856 - - - WDFY family member 4 [Source:ZFIN;Acc:ZDB-GENE-090313-322]
57. hnrnpd ENSDARG00000059246, ENSDARG00000109297, ENSDARG00000113453 3440 1.68 - - - - - 0.879 - - 0.801 heterogeneous nuclear ribonucleoprotein D [Source:ZFIN;Acc:ZDB-GENE-070424-97]
58. trim25l ENSDARG00000020863 292 1.679 0.901 - - - - - 0.778 - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
59. abhd17c ENSDARG00000058452, ENSDARG00000111161 1698 1.679 - - - - - 0.909 - - 0.770 abhydrolase domain containing 17C [Source:ZFIN;Acc:ZDB-GENE-040426-714]
60. tefb ENSDARG00000098103 370 1.678 - - - - - 0.902 0.776 - - thyrotrophic embryonic factor b [Source:ZFIN;Acc:ZDB-GENE-050522-224]
61. gpr143 ENSDARG00000034572 559 1.675 - - - - - 0.849 - - 0.826 G protein-coupled receptor 143 [Source:ZFIN;Acc:ZDB-GENE-040426-1476]
62. ef1 1343 1.675 0.813 - - - - 0.862 - - - E74-like factor 1 (ets domain transcription factor), transcript variant X4
63. nod2 ENSDARG00000010756 294 1.675 - - - - - 0.815 - - 0.860 nucleotide-binding oligomerization domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-061108-4]
64. st8sia2 ENSDARG00000018788 2183 1.674 - - - - - - - 0.895 0.779 ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-020919-4]
65. rrbp1a ENSDARG00000013763 4723 1.669 - - - - - 0.845 - 0.824 - ribosome binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9795]
66. COL13A1 1565 1.667 0.736 - - - - - - 0.931 - collagen, type XIII, alpha 1, transcript variant X1
67. CABZ01087568.1 CABZ01087568.1 1487 1.666 0.881 - - - - - - - 0.785
68. tspan18b ENSDARG00000015015 1433 1.666 0.826 - - - - 0.840 - - - tetraspanin 18b [Source:ZFIN;Acc:ZDB-GENE-040718-137]
69. tmem53 ENSDARG00000038789 411 1.665 - - - - - 0.886 0.779 - - transmembrane protein 53 [Source:ZFIN;Acc:ZDB-GENE-040718-384]
70. NFRKB ENSDARG00000091512 646 1.665 0.873 0.792 - - - - - - - nuclear factor related to kappaB binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6419]
71. sumo3b ENSDARG00000035993 3414 1.664 0.893 - - - - - - - 0.771 small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
72. si:ch211-76l23.4 ENSDARG00000096242 202 1.663 - 0.723 - - - - - 0.940 - si:ch211-76l23.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8310]
73. nr2f6b ENSDARG00000003165 5855 1.662 0.730 - - - - - - 0.932 - nuclear receptor subfamily 2, group F, member 6b [Source:ZFIN;Acc:ZDB-GENE-040426-2351]
74. CABZ01073405.1 CABZ01073405.1 275 1.662 - - - - - - 0.704 0.958 -
75. psmb2 ENSDARG00000031511 4016 1.661 0.761 - - - - - - 0.900 - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
76. si:ch211-264e16.1 ENSDARG00000068947 1358 1.661 0.894 - - - - 0.767 - - - si:ch211-264e16.1 [Source:ZFIN;Acc:ZDB-GENE-060503-226]
77. TRIP10 TRIP10 1079 1.66 - - - - - 0.862 - - 0.798
78. fam89a ENSDARG00000079979 4375 1.66 0.934 - - - - - 0.726 - - family with sequence similarity 89, member A [Source:ZFIN;Acc:ZDB-GENE-111019-1]
79. ppp1r12a ENSDARG00000010784 4333 1.659 - - - - - 0.929 - - 0.730 protein phosphatase 1, regulatory subunit 12A [Source:ZFIN;Acc:ZDB-GENE-041011-3]
80. adamts1 ENSDARG00000103519 539 1.656 - - - - - 0.847 0.809 - - ADAM metallopeptidase with thrombospondin type 1 motif, 1 [Source:ZFIN;Acc:ZDB-GENE-070814-1]
81. ccnk ENSDARG00000034146 1255 1.651 0.881 - - - - 0.770 - - - cyclin K [Source:ZFIN;Acc:ZDB-GENE-030131-5126]
82. foxred2 ENSDARG00000061354 718 1.65 - - - - - - 0.868 - 0.782 FAD-dependent oxidoreductase domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1026]
83. map3k1 ENSDARG00000098405 3043 1.649 - 0.749 - - - - - 0.900 - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
84. ap5s1 ENSDARG00000076755 318 1.646 0.941 - - - - - 0.705 - - adaptor related protein complex 5 subunit sigma 1 [Source:ZFIN;Acc:ZDB-GENE-090313-184]
85. G3BP2_1 G3BP2_1 2390 1.645 0.796 - - - - - - 0.849 -
86. pdxdc1 ENSDARG00000101886 1958 1.644 - - - - - - 0.716 0.928 - pyridoxal-dependent decarboxylase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-16]
87. zgc:110626 ENSDARG00000053159 1124 1.644 0.919 - - - - - 0.725 - - zgc:110626 [Source:ZFIN;Acc:ZDB-GENE-050417-447]
88. FUZ ENSDARG00000079730 821 1.644 - - - - - 0.907 0.737 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
89. SLC25A24 ENSDARG00000008568 2005 1.643 0.720 - - - - - - 0.923 - solute carrier family 25 (mitochondrial carrier; phosphate carrier), member 24 [Source:ZFIN;Acc:ZDB-GENE-040912-183]
90. srek1ip1 ENSDARG00000043728 985 1.642 - - - - - 0.819 - - 0.823 SREK1-interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-051030-24]
91. c7a ENSDARG00000042172 716 1.641 0.884 - - - - 0.757 - - - complement component 7a [Source:ZFIN;Acc:ZDB-GENE-081104-392]
92. CABZ01049802.1 CABZ01049802.1 195 1.641 - - - - - 0.882 0.759 - -
93. snrpd3 ENSDARG00000013800, ENSDARG00000112203 3334 1.639 - - - - - 0.844 - - 0.795 small nuclear ribonucleoprotein D3 polypeptide [Source:ZFIN;Acc:ZDB-GENE-040625-55]
94. rab9a ENSDARG00000045027 201 1.638 - - - - - 0.884 0.754 - - RAB9A, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-060825-293]
95. ik ENSDARG00000004161 3132 1.637 - - - - - 0.843 - - 0.794 IK cytokine [Source:ZFIN;Acc:ZDB-GENE-030131-960]
96. suz12a ENSDARG00000070256 2229 1.635 0.891 - - - - - 0.744 - - SUZ12, polycomb repressive complex 2 subunit a [Source:ZFIN;Acc:ZDB-GENE-040801-36]
97. si:ch211-210c8.6 ENSDARG00000017811 908 1.635 0.783 - - - - 0.852 - - - si:ch211-210c8.6 [Source:ZFIN;Acc:ZDB-GENE-030131-3630]
98. ezrb ENSDARG00000025091 2861 1.633 - - - - - - 0.855 - 0.778 ezrin b [Source:ZFIN;Acc:ZDB-GENE-050803-1]
99. sptlc2b ENSDARG00000074287 1853 1.632 0.783 - - - - - - - 0.849 serine palmitoyltransferase, long chain base subunit 2b [Source:ZFIN;Acc:ZDB-GENE-080305-8]
100. si:ch211-11k18.4 ENSDARG00000087869 3298 1.63 - - - - - 0.751 - 0.879 - si:ch211-11k18.4 [Source:ZFIN;Acc:ZDB-GENE-070912-22]

There are 2427 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA