Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnpo3

Gene Name Gene ID Reads Annotation
tnpo3 ENSDARG00000045680 694 transportin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-708]










Genes with expression patterns similar to tnpo3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnpo3 ENSDARG00000045680 694 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transportin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-708]
2. socs3a ENSDARG00000025428 349 1.625 - 0.841 - 0.784 - - - - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
3. DSN1 ENSDARG00000089922 269 1.47 - 0.767 - 0.703 - - - - - DSN1 homolog, MIS12 kinetochore complex component [Source:ZFIN;Acc:ZDB-GENE-170110-2]
4. MIB1 ENSDARG00000102184 3285 0.892 - 0.892 - - - - - - - mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
5. fndc3bb ENSDARG00000062023 1502 0.877 - 0.877 - - - - - - - fibronectin type III domain containing 3Bb [Source:ZFIN;Acc:ZDB-GENE-070510-2]
6. ube3a ENSDARG00000055737 1874 0.865 - 0.865 - - - - - - - ubiquitin protein ligase E3A [Source:ZFIN;Acc:ZDB-GENE-041114-190]
7. dis3l ENSDARG00000053200, ENSDARG00000112358 267 0.859 - - - 0.859 - - - - - DIS3 like exosome 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-070209-95]
8. CABZ01088330.1 CABZ01088330.1 679 0.857 - 0.857 - - - - - - -
9. scnm1 ENSDARG00000003027 256 0.845 - 0.845 - - - - - - - sodium channel modifier 1 [Source:ZFIN;Acc:ZDB-GENE-030131-415]
10. GPANK1 ENSDARG00000053995 1535 0.842 - 0.842 - - - - - - - G patch domain and ankyrin repeats 1 [Source:ZFIN;Acc:ZDB-GENE-070928-32]
11. BX649282.1 ENSDARG00000105704 347 0.839 - 0.839 - - - - - - -
12. eif4e3 ENSDARG00000005078 1624 0.835 - 0.835 - - - - - - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
13. mtif2 ENSDARG00000063213, ENSDARG00000113856 377 0.835 - 0.835 - - - - - - - mitochondrial translational initiation factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1092]
14. smc5 ENSDARG00000044282 779 0.83 - - - 0.830 - - - - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
15. gorab ENSDARG00000042031 483 0.828 - - - 0.828 - - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
16. adipor1a ENSDARG00000002912, ENSDARG00000113136 796 0.828 - 0.828 - - - - - - - adiponectin receptor 1a [Source:ZFIN;Acc:ZDB-GENE-040718-169]
17. nab1b ENSDARG00000040700 289 0.826 - - - 0.826 - - - - - NGFI-A binding protein 1b (EGR1 binding protein 1) [Source:ZFIN;Acc:ZDB-GENE-081105-85]
18. med6 ENSDARG00000034734 2711 0.825 - 0.825 - - - - - - - mediator complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040625-61]
19. spred2b ENSDARG00000008372 405 0.824 - - - 0.824 - - - - - sprouty-related, EVH1 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-040426-2342]
20. CCDC61 ENSDARG00000062307 582 0.822 - 0.822 - - - - - - - coiled-coil domain containing 61 [Source:ZFIN;Acc:ZDB-GENE-060929-348]
21. mrpl9 ENSDARG00000063249 783 0.818 - - - - - - 0.818 - - mitochondrial ribosomal protein L9 [Source:ZFIN;Acc:ZDB-GENE-070717-4]
22. gna13a ENSDARG00000073765 925 0.816 - - - 0.816 - - - - - guanine nucleotide binding protein (G protein), alpha 13a [Source:ZFIN;Acc:ZDB-GENE-030131-5024]
23. CU928083.1 ENSDARG00000097907 1279 0.816 - 0.816 - - - - - - -
24. tsku ENSDARG00000040815 631 0.816 - - - 0.816 - - - - - tsukushi small leucine rich proteoglycan homolog (Xenopus laevis) [Source:ZFIN;Acc:ZDB-GENE-030131-4683]
25. nfybb ENSDARG00000045611, ENSDARG00000110926 350 0.813 - 0.813 - - - - - - - nuclear transcription factor Y, beta b [Source:ZFIN;Acc:ZDB-GENE-050306-25]
26. ATP6AP1L_1 ATP6AP1L_1 508 0.812 - 0.812 - - - - - - -
27. rd3 ENSDARG00000031600 1085 0.811 - - - 0.811 - - - - - retinal degeneration 3, GUCY2D regulator [Source:ZFIN;Acc:ZDB-GENE-040724-103]
28. si:dkeyp-68b7.7 ENSDARG00000038476, ENSDARG00000092766 96 0.81 - - - 0.810 - - - - - si:dkeyp-68b7.7 [Source:ZFIN;Acc:ZDB-GENE-070912-672]
29. ift46 ENSDARG00000011240 2499 0.81 - 0.810 - - - - - - - intraflagellar transport 46 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-080102-3]
30. naa40 ENSDARG00000024109, ENSDARG00000090570 4759 0.81 - - - - - - 0.810 - - N(alpha)-acetyltransferase 40, NatD catalytic subunit, homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050417-105]
31. zgc:55764 zgc:55764 645 0.809 - 0.809 - - - - - - -
32. nsun5 ENSDARG00000043209 764 0.809 - - - - - - 0.809 - - NOP2/Sun domain family, member 5 [Source:ZFIN;Acc:ZDB-GENE-040426-2476]
33. zgc:123105 ENSDARG00000003127 3061 0.809 - 0.809 - - - - - - - zgc:123105 [Source:ZFIN;Acc:ZDB-GENE-051113-272]
34. ZPLXDC2 ZPLXDC2 1298 0.808 - - - 0.808 - - - - -
35. PEG3_15 PEG3_15 113 0.808 - - - 0.808 - - - - -
36. RNF169 ENSDARG00000042825 727 0.808 - 0.808 - - - - - - - ring finger protein 169 [Source:ZFIN;Acc:ZDB-GENE-030131-4336]
37. fzd7b ENSDARG00000027589 2562 0.807 - 0.807 - - - - - - - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
38. mrpl45 ENSDARG00000044942, ENSDARG00000114416, ENSDARG00000115767 1599 0.805 - 0.805 - - - - - - - mitochondrial ribosomal protein L45 [Source:ZFIN;Acc:ZDB-GENE-040426-1041]
39. rad52 ENSDARG00000005274, ENSDARG00000116828 111 0.804 - - - 0.804 - - - - - RAD52 homolog, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-050731-10]
40. gbx1 ENSDARG00000071418 871 0.804 - - - 0.804 - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
41. btaf1 ENSDARG00000060089 822 0.803 - 0.803 - - - - - - - BTAF1 RNA polymerase II, B-TFIID transcription factor-associated [Source:ZFIN;Acc:ZDB-GENE-021025-1]
42. ttyh2 ENSDARG00000016934 1868 0.802 - 0.802 - - - - - - - tweety family member 2 [Source:ZFIN;Acc:ZDB-GENE-040718-193]
43. SEMA4C ENSDARG00000079611 610 0.802 - - - 0.802 - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4C [Source:ZFIN;Acc:ZDB-GENE-080303-16]
44. apoa1bp 529 0.802 - 0.802 - - - - - - - apolipoprotein A-I binding protein
45. sh3kbp1 ENSDARG00000075853 2838 0.802 - 0.802 - - - - - - - SH3-domain kinase binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-091204-186]
46. ampd3b ENSDARG00000032469, ENSDARG00000117191 350 0.801 - - - 0.801 - - - - - adenosine monophosphate deaminase 3b [Source:ZFIN;Acc:ZDB-GENE-030131-5929]
47. zhx3 ENSDARG00000019774 463 0.801 - 0.801 - - - - - - - zinc fingers and homeoboxes 3 [Source:ZFIN;Acc:ZDB-GENE-031107-1]
48. nup62l ENSDARG00000020527, ENSDARG00000111836, ENSDARG00000112620 3763 0.8 - - - - - - 0.800 - - nucleoporin 62 like [Source:ZFIN;Acc:ZDB-GENE-030131-8491]
49. rhbdd1 ENSDARG00000021046 120 0.8 - - - 0.800 - - - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
50. shc2 ENSDARG00000062080, ENSDARG00000111448 426 0.799 - - - 0.799 - - - - - SHC (Src homology 2 domain containing) transforming protein 2 [Source:ZFIN;Acc:ZDB-GENE-050208-666]
51. crabp2b ENSDARG00000030449 3091 0.799 - - - 0.799 - - - - - cellular retinoic acid binding protein 2, b [Source:ZFIN;Acc:ZDB-GENE-050208-52]
52. cln8 ENSDARG00000075525, ENSDARG00000113042 601 0.799 - - - 0.799 - - - - - CLN8, transmembrane ER and ERGIC protein [Source:ZFIN;Acc:ZDB-GENE-060906-3]
53. snx27b ENSDARG00000016977 2768 0.799 - - 0.799 - - - - - - sorting nexin family member 27b [Source:ZFIN;Acc:ZDB-GENE-040426-1529]
54. gcc1 ENSDARG00000045541 1821 0.798 - 0.798 - - - - - - - GRIP and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040801-118]
55. vps72 1164 0.798 - 0.798 - - - - - - - vacuolar protein sorting 72 homolog (S. cerevisiae)
56. ttc4 ENSDARG00000044405, ENSDARG00000117012 453 0.798 - 0.798 - - - - - - - tetratricopeptide repeat domain 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1021]
57. fibpa ENSDARG00000016058 2148 0.797 - - - - - - 0.797 - - fibroblast growth factor (acidic) intracellular binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1363]
58. snrpb2 ENSDARG00000039424 1597 0.797 - 0.797 - - - - - - - small nuclear ribonucleoprotein polypeptide B2 [Source:ZFIN;Acc:ZDB-GENE-060616-2]
59. MCM8 ENSDARG00000074326 128 0.796 - 0.796 - - - - - - - minichromosome maintenance 8 homologous recombination repair factor [Source:ZFIN;Acc:ZDB-GENE-120927-1]
60. SUSD3 SUSD3 64 0.795 - - - - - 0.795 - - -
61. polr3c ENSDARG00000057562 123 0.795 - - - 0.795 - - - - - polymerase (RNA) III (DNA directed) polypeptide C [Source:ZFIN;Acc:ZDB-GENE-040426-992]
62. TRIM65 ENSDARG00000077098 991 0.795 - 0.795 - - - - - - - tripartite motif containing 65 [Source:ZFIN;Acc:ZDB-GENE-130613-1]
63. C24H3orf58 C24H3orf58 99 0.795 - - - 0.795 - - - - -
64. ccdc59 ENSDARG00000045755 297 0.795 - 0.795 - - - - - - - coiled-coil domain containing 59 [Source:ZFIN;Acc:ZDB-GENE-041210-91]
65. errfi1 errfi1 979 0.794 - - - - - - 0.794 - -
66. gdf6b ENSDARG00000005510 106 0.794 - - - 0.794 - - - - - growth differentiation factor 6b [Source:ZFIN;Acc:ZDB-GENE-980526-442]
67. cog5 ENSDARG00000008235 222 0.794 - - - 0.794 - - - - - component of oligomeric golgi complex 5 [Source:ZFIN;Acc:ZDB-GENE-041210-47]
68. CCDC135 ENSDARG00000100231 48 0.793 - - - 0.793 - - - - - coiled-coil domain containing 135 [Source:ZFIN;Acc:ZDB-GENE-120406-10]
69. cbx8a_1 ENSDARG00000087327 109 0.793 - - - 0.793 - - - - - chromobox homolog 8a (Pc class homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040405-1]
70. C10H11orf30 C10H11orf30 1982 0.792 - 0.792 - - - - - - -
71. dynll2a ENSDARG00000069790, ENSDARG00000114539 2328 0.792 - - - - - - 0.792 - - dynein, light chain, LC8-type 2a [Source:ZFIN;Acc:ZDB-GENE-030828-11]
72. casc4 ENSDARG00000074490 2019 0.791 - 0.791 - - - - - - - cancer susceptibility candidate 4 [Source:ZFIN;Acc:ZDB-GENE-091130-1]
73. dph3 ENSDARG00000043360 117 0.791 - - - 0.791 - - - - - diphthamide biosynthesis 3 [Source:ZFIN;Acc:ZDB-GENE-050522-545]
74. si:dkey-97l20.5 si:dkey-97l20.5 33 0.791 - - - 0.791 - - - - -
75. aff2 ENSDARG00000052242 540 0.791 - 0.791 - - - - - - - AF4/FMR2 family, member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-190]
76. si:ch73-248e21.7 ENSDARG00000096331 176 0.79 - 0.790 - - - - - - - si:ch73-248e21.7 [Source:ZFIN;Acc:ZDB-GENE-120215-231]
77. rbpms2b ENSDARG00000079578 436 0.79 - 0.790 - - - - - - - RNA binding protein, mRNA processing factor 2b [Source:ZFIN;Acc:ZDB-GENE-040426-741]
78. PHF13 ENSDARG00000102023 1102 0.79 - - - - - - 0.790 - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
79. mdn1 ENSDARG00000008976 1403 0.79 - 0.790 - - - - - - - midasin AAA ATPase 1 [Source:ZFIN;Acc:ZDB-GENE-041001-138]
80. tnfrsf1b ENSDARG00000070165 467 0.79 - - - 0.790 - - - - - tumor necrosis factor receptor superfamily, member 1B [Source:ZFIN;Acc:ZDB-GENE-070410-133]
81. gria1a ENSDARG00000021352, ENSDARG00000111182, ENSDARG00000111756, ENSDARG00000112683 169 0.789 - - - 0.789 - - - - - glutamate receptor, ionotropic, AMPA 1a [Source:ZFIN;Acc:ZDB-GENE-020125-1]
82. icln icln 1279 0.789 - - - 0.789 - - - - -
83. slc19a2 ENSDARG00000059712 533 0.789 - 0.789 - - - - - - - solute carrier family 19 (thiamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110411-262]
84. klhl42 ENSDARG00000006011 46 0.789 - - - 0.789 - - - - - kelch-like family, member 42 [Source:ZFIN;Acc:ZDB-GENE-041210-190]
85. CCDC176_1 CCDC176_1 126 0.789 - - - 0.789 - - - - -
86. xpnpep3 ENSDARG00000007916 166 0.789 - 0.789 - - - - - - - X-prolyl aminopeptidase 3, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-040426-2076]
87. pafah1b2 ENSDARG00000035352, ENSDARG00000114404 664 0.788 - 0.788 - - - - - - - platelet-activating factor acetylhydrolase 1b, catalytic subunit 2 [Source:ZFIN;Acc:ZDB-GENE-060526-43]
88. gtf3c6 ENSDARG00000043301 97 0.788 - - - 0.788 - - - - - general transcription factor IIIC, polypeptide 6, alpha [Source:ZFIN;Acc:ZDB-GENE-040426-1009]
89. caln2 ENSDARG00000069766 290 0.787 - - - - - - 0.787 - - calneuron 2 [Source:ZFIN;Acc:ZDB-GENE-091204-251]
90. dclre1a ENSDARG00000091768 94 0.787 - - - - - 0.787 - - - DNA cross-link repair 1A (PSO2 homolog, S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-050522-124]
91. si:dkey-3p4.8 ENSDARG00000114124 82 0.787 - - - - - 0.787 - - - si:dkey-3p4.8 [Source:ZFIN;Acc:ZDB-GENE-120215-16]
92. ttc12 ENSDARG00000056896 97 0.787 - - - 0.787 - - - - - tetratricopeptide repeat domain 12 [Source:ZFIN;Acc:ZDB-GENE-071016-4]
93. slc16a6a ENSDARG00000102793 60 0.787 - - - 0.787 - - - - - solute carrier family 16, member 6a [Source:ZFIN;Acc:ZDB-GENE-110208-1]
94. NF1 NF1 62 0.787 - - - - - 0.787 - - -
95. zgc:193711 ENSDARG00000101901 503 0.787 - - - 0.787 - - - - - zgc:193711 [Source:ZFIN;Acc:ZDB-GENE-081022-34]
96. si:ch211-113a14.15_2 37 0.787 - - - 0.787 - - - - - si:ch211-113a14.15
97. smurf2 ENSDARG00000038067 2057 0.787 - 0.787 - - - - - - - SMAD specific E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1830]
98. rab23 ENSDARG00000004151 1077 0.786 - 0.786 - - - - - - - RAB23, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-050522-328]
99. phf8 ENSDARG00000006584 476 0.786 - - - 0.786 - - - - - PHD finger protein 8 [Source:ZFIN;Acc:ZDB-GENE-060419-1]
100. ccdc113 ENSDARG00000006981 67 0.786 - - - 0.786 - - - - - coiled-coil domain containing 113 [Source:ZFIN;Acc:ZDB-GENE-041010-163]

There are 442 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA