Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnnt3a

Gene Name Gene ID Reads Annotation
tnnt3a ENSDARG00000030270 112506 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]










Genes with expression patterns similar to tnnt3a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnnt3a ENSDARG00000030270 112506 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
2. mylz3 ENSDARG00000017441 303597 7.164 0.924 - 0.968 0.889 0.918 0.902 0.731 0.932 0.900 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
3. ckmb ENSDARG00000040565 505935 7.025 0.870 - 0.956 0.916 0.910 0.831 0.838 0.919 0.785 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. atp2a1 ENSDARG00000020574 291561 6.906 0.922 - 0.942 0.831 0.950 0.737 0.867 0.778 0.879 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
5. myhz1.3 ENSDARG00000067997 155509 6.782 0.942 - 0.892 0.920 0.905 0.826 0.751 0.778 0.768 myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
6. CR354540.2 ENSDARG00000117517 18452 6.741 0.899 - 0.900 0.737 0.851 0.719 0.798 0.921 0.916
7. tpma ENSDARG00000033683 752432 6.702 0.931 - 0.917 0.861 0.908 0.713 0.809 0.762 0.801 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
8. acta1b ENSDARG00000055618 195597 6.622 0.911 - 0.944 0.740 0.826 0.842 0.839 0.811 0.709 actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
9. PTPLA PTPLA 4044 6.365 0.894 - 0.721 0.762 0.751 0.753 0.818 0.773 0.893
10. si:ch211-226o13.2 84923 6.264 0.875 - 0.939 0.878 0.836 0.892 - 0.880 0.964 si:ch211-226o13.2
11. ckma ENSDARG00000035327, ENSDARG00000114671 418792 6.251 0.903 - 0.927 0.883 0.860 0.880 - 0.928 0.870 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
12. zgc:92518 ENSDARG00000016343 3837 6.236 0.895 0.765 0.786 0.708 0.772 0.766 0.811 - 0.733 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
13. neb ENSDARG00000032630, ENSDARG00000109273 19493 6.076 0.898 - 0.947 0.845 0.859 0.863 - 0.739 0.925 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
14. tnni2a.4 ENSDARG00000029069 122344 6.008 0.941 - 0.893 0.755 0.907 0.743 - 0.908 0.861 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
15. ttnb ttnb 73721 5.932 0.713 - 0.959 0.862 0.904 0.762 - 0.892 0.840
16. trdn ENSDARG00000041779 4283 5.817 0.910 - 0.912 - 0.870 0.740 0.783 0.725 0.877 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
17. mybpc2b ENSDARG00000021265 9618 5.795 0.898 - 0.894 0.857 0.717 - 0.799 0.731 0.899 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
18. prx ENSDARG00000017246 6183 5.751 0.857 - 0.878 0.830 0.780 - 0.806 0.746 0.854 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
19. ryr3 ENSDARG00000071331 6795 5.671 0.836 - 0.839 - 0.728 0.817 0.783 0.755 0.913 ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
20. murca murca 6614 5.625 0.927 0.827 0.874 0.703 0.776 0.739 - - 0.779
21. pkmb ENSDARG00000099860 25094 5.548 0.864 - 0.733 0.793 0.822 - 0.734 0.866 0.736 pyruvate kinase M1/2b [Source:ZFIN;Acc:ZDB-GENE-040801-230]
22. tnnt2d ENSDARG00000002988 7590 5.546 0.829 - 0.799 0.756 0.749 - 0.740 0.743 0.930 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
23. znf648 ENSDARG00000104823 1918 5.525 0.786 - 0.798 0.787 - 0.754 0.723 0.844 0.833 zinc finger protein 648 [Source:ZFIN;Acc:ZDB-GENE-120215-149]
24. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 5.523 0.835 - 0.792 0.815 - 0.718 0.772 0.713 0.878 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
25. mdh1b ENSDARG00000018008 3196 5.512 0.819 - 0.760 0.766 0.736 0.727 0.810 - 0.894 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
26. jph1a ENSDARG00000058603 2852 5.48 - - 0.787 0.795 0.707 0.771 0.787 0.780 0.853 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
27. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 5.409 0.957 - 0.936 0.704 0.935 0.921 - 0.956 - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
28. myoz1b ENSDARG00000071445 13381 5.384 0.882 - 0.903 0.877 0.843 - - 0.932 0.947 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
29. myl1 ENSDARG00000014196 98943 5.275 0.841 - 0.966 0.751 0.961 0.831 - 0.925 - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
30. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 5.252 0.923 - 0.896 - 0.908 - 0.821 0.773 0.931 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
31. SYNPO2L SYNPO2L 6697 5.175 0.896 - 0.862 0.849 0.850 0.779 - - 0.939
32. BX294434.1 ENSDARG00000061272 6493 5.097 0.889 - 0.893 0.806 - - 0.812 0.764 0.933 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
33. rtn2a ENSDARG00000016088 12184 5.065 0.901 - 0.898 0.799 0.842 - 0.822 0.803 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
34. hhatla ENSDARG00000039051 6598 5.063 0.876 - 0.866 0.798 0.769 - 0.810 - 0.944 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
35. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 5.033 0.864 - 0.856 0.877 0.728 - 0.814 0.894 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
36. pvalb2 ENSDARG00000002768, ENSDARG00000114085 333278 4.985 0.886 - 0.891 - 0.733 0.810 - 0.813 0.852 parvalbumin 2 [Source:ZFIN;Acc:ZDB-GENE-000322-4]
37. tmem38a ENSDARG00000024047 41883 4.966 0.898 0.790 0.847 0.719 0.917 - - 0.795 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
38. tgm2a ENSDARG00000070157 4516 4.964 0.930 - 0.879 - 0.771 0.717 0.800 - 0.867 transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
39. nexn ENSDARG00000057317 10972 4.944 0.933 0.828 0.743 - - 0.776 0.789 - 0.875 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
40. casq1a ENSDARG00000038716, ENSDARG00000116662 6300 4.943 0.831 - 0.722 0.842 - 0.816 - 0.819 0.913 calsequestrin 1a [Source:ZFIN;Acc:ZDB-GENE-040801-139]
41. jph2 ENSDARG00000028625 6706 4.943 0.844 - - 0.763 0.787 - 0.811 0.798 0.940 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
42. srl ENSDARG00000104587 11126 4.872 0.866 - 0.853 0.776 0.812 - 0.792 0.773 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
43. casq2 ENSDARG00000008982 21802 4.865 0.942 - 0.819 0.763 0.901 0.713 - - 0.727 calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
44. txlnbb ENSDARG00000076241 6396 4.852 0.893 - - - 0.805 0.808 0.810 0.719 0.817 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
45. desma ENSDARG00000058656 30292 4.849 0.894 0.716 0.856 0.750 0.900 - - 0.733 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
46. NRAP ENSDARG00000009341 3565 4.843 0.879 - 0.777 0.834 0.780 0.779 0.794 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
47. EHBP1L1 EHBP1L1 2500 4.807 0.852 - 0.866 0.725 0.811 - 0.813 0.740 -
48. CR847973.1 ENSDARG00000115516 8754 4.789 0.829 - 0.803 0.793 - - 0.731 0.743 0.890
49. SPEG SPEG 4017 4.78 0.820 - 0.800 0.750 0.822 - 0.786 - 0.802
50. sar1ab ENSDARG00000033320 3984 4.773 0.852 - 0.765 0.786 0.833 - 0.795 0.742 - secretion associated, Ras related GTPase 1Ab [Source:ZFIN;Acc:ZDB-GENE-050417-437]
51. si:ch211-255p10.3 ENSDARG00000096616 8336 4.74 - - 0.790 0.740 - 0.744 0.770 0.784 0.912 si:ch211-255p10.3 [Source:ZFIN;Acc:ZDB-GENE-121214-339]
52. si:ch211-156j16.1 ENSDARG00000092035 7441 4.733 0.931 - 0.721 - 0.722 - 0.809 0.712 0.838 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
53. bin1 bin1 3199 4.724 0.872 - 0.854 - 0.759 - 0.719 0.725 0.795
54. sgcd ENSDARG00000098573 4980 4.716 0.817 - 0.815 - 0.788 - 0.780 0.717 0.799 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
55. fitm1 ENSDARG00000056464 1759 4.687 0.874 - - - 0.728 0.776 0.770 0.756 0.783 fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
56. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 4.679 0.882 - - - 0.728 0.794 0.784 0.722 0.769 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
57. casq1b ENSDARG00000018105 2643 4.631 0.837 - 0.727 0.706 0.703 - 0.795 - 0.863 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
58. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 4.591 0.888 - 0.715 0.724 0.703 0.796 0.765 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
59. ttna ttna 101197 4.522 0.883 - 0.930 - 0.903 - - 0.880 0.926
60. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 4.49 0.925 - 0.808 0.889 - - - 0.900 0.968 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
61. ryr1b ENSDARG00000023797 5693 4.229 - - 0.858 - 0.800 - 0.797 0.860 0.914 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
62. pgam2 ENSDARG00000057571 23387 4.212 0.919 - 0.757 0.856 0.914 - - 0.766 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
63. tnnt3b ENSDARG00000068457 101827 4.181 0.818 - 0.905 0.851 - 0.724 - 0.883 - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]
64. myom1a ENSDARG00000061249 10230 4.131 - - 0.849 - - 0.778 0.800 0.820 0.884 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
65. cap2 ENSDARG00000104478 3266 4.123 0.896 - - - 0.740 - 0.789 0.809 0.889 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
66. znf106a ENSDARG00000016651 6049 4.115 0.862 - - - 0.839 - 0.777 0.738 0.899 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
67. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 4.102 - - 0.830 0.845 - 0.816 - 0.785 0.826 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
68. si:ch211-114n24.7 si:ch211-114n24.7 2544 4.083 0.865 - 0.881 0.765 0.801 - 0.771 - -
69. klhl41b ENSDARG00000006757 10762 4.083 0.907 - - - 0.725 0.749 0.819 - 0.883 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
70. pvalb4 ENSDARG00000024433 35736 4.075 0.895 - 0.748 0.799 0.866 - 0.767 - - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
71. smtnl1 ENSDARG00000041257 7410 4.071 0.907 0.858 - - - 0.779 0.805 - 0.722 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
72. adss ENSDARG00000002071 5497 4.067 0.843 - 0.812 - 0.879 - 0.785 - 0.748 adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
73. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 4.05 0.831 - - 0.723 - - 0.776 0.791 0.929 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
74. klhl31 ENSDARG00000039066 13656 4.038 - - 0.795 - 0.817 - 0.707 0.793 0.926 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
75. zgc:158296 ENSDARG00000070923 3935 4.032 - - 0.831 - 0.765 0.808 0.817 - 0.811 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
76. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 4.026 0.885 - 0.809 0.735 - - 0.792 0.805 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
77. BX324201.1 BX324201.1 3302 4.009 0.905 - 0.768 - - - 0.787 0.726 0.823
78. MYOM1 MYOM1 3870 4.008 0.826 - 0.772 - - - 0.780 0.770 0.860
79. eef2l2 ENSDARG00000035256 6815 3.998 0.867 - 0.879 0.771 0.770 - 0.711 - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
80. stac3 ENSDARG00000098883 1765 3.986 0.879 - 0.811 - - 0.787 0.734 - 0.775 SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
81. ptrfa ptrfa 4363 3.969 0.856 - - 0.792 - 0.759 - 0.716 0.846
82. sptb ENSDARG00000030490 7128 3.932 0.881 - 0.737 - - 0.755 0.817 - 0.742 spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
83. cfl2 ENSDARG00000014106 8051 3.925 0.814 - 0.869 0.764 0.755 - - 0.723 - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
84. rp42-pen rp42-pen 3395 3.9 - - 0.792 - 0.755 0.762 0.778 - 0.813
85. myoz2a ENSDARG00000012311 1373 3.881 0.785 - 0.719 0.793 - - 0.778 - 0.806 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
86. pbxip1a ENSDARG00000071015 4960 3.869 0.835 - 0.768 - 0.741 - 0.767 - 0.758 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
87. chrna1 ENSDARG00000009021 2931 3.835 0.866 - - 0.748 - 0.720 0.783 - 0.718 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
88. apobec2a ENSDARG00000018881 4790 3.816 0.870 - 0.725 0.745 - - - 0.725 0.751 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
89. pabpc4 ENSDARG00000059259, ENSDARG00000111312 2392 3.807 0.820 - 0.752 - - - 0.701 0.707 0.827 poly(A) binding protein, cytoplasmic 4 (inducible form) [Source:ZFIN;Acc:ZDB-GENE-030131-9663]
90. alpk2 ENSDARG00000079637 1483 3.776 0.829 - 0.714 - - 0.745 0.772 - 0.716 alpha-kinase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1868]
91. CR392006.1 CR392006.1 1401 3.765 0.767 - - - - 0.775 0.706 0.715 0.802
92. phex ENSDARG00000062363 1413 3.688 - - 0.715 0.759 - 0.726 0.753 - 0.735 phosphate regulating endopeptidase homolog, X-linked [Source:ZFIN;Acc:ZDB-GENE-030103-2]
93. chrne ENSDARG00000034307, ENSDARG00000112263 1022 3.668 - - 0.708 0.743 - 0.707 0.748 - 0.762 cholinergic receptor, nicotinic, epsilon [Source:ZFIN;Acc:ZDB-GENE-040808-32]
94. mylpfb ENSDARG00000002589 70167 3.58 - - 0.963 0.893 0.889 - - 0.835 - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
95. tmod4 ENSDARG00000020890 17436 3.575 - - 0.854 0.869 0.901 - - - 0.951 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
96. acta1a ENSDARG00000036371 137508 3.515 0.830 - - - - 0.946 0.858 0.881 - actin, alpha 1a, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-050417-267]
97. tnnc2 ENSDARG00000070835, ENSDARG00000111155 259313 3.496 0.917 - - 0.810 - 0.857 - 0.912 - troponin C type 2 (fast) [Source:ZFIN;Acc:ZDB-GENE-000322-2]
98. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 3.45 0.885 - 0.898 0.793 0.874 - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
99. smyd2b ENSDARG00000005629 8181 3.426 0.898 - - - 0.862 0.792 - - 0.874 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
100. pygma ENSDARG00000055518 15972 3.422 0.931 - - - 0.841 - 0.796 - 0.854 phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]

There are 709 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA