Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnnt1

Gene Name Gene ID Reads Annotation
tnnt1 ENSDARG00000037954 104 troponin T type 1 (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-080723-27]










Genes with expression patterns similar to tnnt1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnnt1 ENSDARG00000037954 104 8 1.000 - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin T type 1 (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-080723-27]
2. grap2a ENSDARG00000006468 70 1.667 0.877 - - - - - 0.790 - - GRB2 related adaptor protein 2a [Source:ZFIN;Acc:ZDB-GENE-050417-275]
3. sumf2 ENSDARG00000069497 51 1.582 0.760 - - - - - - 0.822 - sulfatase modifying factor 2 [Source:ZFIN;Acc:ZDB-GENE-041010-55]
4. HNRNPH3 ENSDARG00000039466, ENSDARG00000113164, ENSDARG00000114248 551 1.574 - - - - 0.794 0.780 - - - heterogeneous nuclear ribonucleoprotein H3 (2H9) [Source:ZFIN;Acc:ZDB-GENE-060421-3878]
5. KCNK3 KCNK3 115 1.573 0.762 - 0.811 - - - - - -
6. slx4ip ENSDARG00000039069 260 1.548 - - - - - 0.763 - 0.785 - SLX4 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040426-1365]
7. fndc1 ENSDARG00000002847 178 1.548 - - - - - 0.700 - 0.848 - fibronectin type III domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-332]
8. znf236 ENSDARG00000095890 410 1.535 - - - - - - 0.831 0.704 - zinc finger protein 236 [Source:ZFIN;Acc:ZDB-GENE-041111-195]
9. ormdl3 ENSDARG00000025555, ENSDARG00000110450 70 1.523 - - - - - - 0.732 0.791 - ORMDL sphingolipid biosynthesis regulator 3 [Source:ZFIN;Acc:ZDB-GENE-041010-190]
10. si:ch211-190k17.19 ENSDARG00000095756 19 1.516 - - - - - 0.710 - 0.806 - si:ch211-190k17.19 [Source:ZFIN;Acc:ZDB-GENE-070912-167]
11. dlec1 ENSDARG00000075825 60 1.511 - - - - - - 0.749 0.762 - DLEC1, cilia and flagella associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-65]
12. LRRC16B 84 1.506 - - - - - 0.700 0.806 - - leucine rich repeat containing 16B, transcript variant X2
13. pigv ENSDARG00000101952 173 1.474 - - - - 0.737 - - 0.737 - phosphatidylinositol glycan anchor biosynthesis, class V [Source:ZFIN;Acc:ZDB-GENE-121116-1]
14. flt1 ENSDARG00000019371, ENSDARG00000111797 128 1.468 0.701 - - - 0.767 - - - - fms-related tyrosine kinase 1 (vascular endothelial growth factor/vascular permeability factor receptor) [Source:ZFIN;Acc:ZDB-GENE-050407-1]
15. zgc:103759 ENSDARG00000019503 58 0.957 0.957 - - - - - - - - zgc:103759 [Source:ZFIN;Acc:ZDB-GENE-041010-100]
16. yjefn3 ENSDARG00000061692 211 0.952 - - 0.952 - - - - - - YjeF N-terminal domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050208-755]
17. ATP9A ENSDARG00000115869 9 0.922 - - 0.922 - - - - - - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
18. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 0.913 - - 0.913 - - - - - -
19. RNF214_1 RNF214_1 5 0.912 - - 0.912 - - - - - -
20. csrp1b ENSDARG00000030980 2 0.912 - - 0.912 - - - - - - cysteine and glycine-rich protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-252]
21. hes2.1 ENSDARG00000074897 10 0.912 - - 0.912 - - - - - - hes family bHLH transcription factor 2, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-081104-104]
22. EGFR_1 EGFR_1 2 0.912 - - 0.912 - - - - - -
23. ENSDARG00000062524 ENSDARG00000062524 1 0.912 - - 0.912 - - - - - -
24. cyp46a4 cyp46a4 5 0.912 - - 0.912 - - - - - -
25. DNM2 DNM2 2 0.912 - - 0.912 - - - - - -
26. spo11 ENSDARG00000013837 7 0.912 - - 0.912 - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
27. GOLT1A ENSDARG00000088933 14 0.912 - - 0.912 - - - - - - golgi transport 1A [Source:ZFIN;Acc:ZDB-GENE-141212-320]
28. si:dkeyp-66d7.4 si:dkeyp-66d7.4 2 0.912 - - 0.912 - - - - - -
29. ANKRD34C 13 0.912 - - 0.912 - - - - - - ankyrin repeat domain 34C
30. si:dkey-149m13.5 ENSDARG00000094653 1 0.912 - - 0.912 - - - - - - si:dkey-149m13.5 [Source:ZFIN;Acc:ZDB-GENE-110913-74]
31. HIST1H4F HIST1H4F 1 0.912 - - 0.912 - - - - - -
32. plxnd1 ENSDARG00000086057 2 0.912 - - 0.912 - - - - - - plexin D1 [Source:ZFIN;Acc:ZDB-GENE-040426-1828]
33. tet1 ENSDARG00000075230, ENSDARG00000110764 8 0.912 - - 0.912 - - - - - - tet methylcytosine dioxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-090312-88]
34. CU855733.1 CU855733.1 2 0.912 - - 0.912 - - - - - -
35. ntrk3b ENSDARG00000086214 1 0.912 - - 0.912 - - - - - - neurotrophic tyrosine kinase, receptor, type 3b [Source:ZFIN;Acc:ZDB-GENE-010126-4]
36. meiob 75 0.912 - - 0.912 - - - - - - meiosis specific with OB domains
37. si:dkey-208k22.1 si:dkey-208k22.1 1 0.912 - - 0.912 - - - - - -
38. si:ch211-113a14.29_1 4 0.912 - - 0.912 - - - - - - si:ch211-113a14.29
39. def8_1 ENSDARG00000068208 1 0.912 - - 0.912 - - - - - - differentially expressed in FDCP 8 homolog (mouse) [Source:ZFIN;Acc:ZDB-GENE-041114-96]
40. gnrh3 ENSDARG00000056214, ENSDARG00000112890 226 0.912 - - 0.912 - - - - - - gonadotropin-releasing hormone 3 [Source:ZFIN;Acc:ZDB-GENE-030724-4]
41. chia.3 ENSDARG00000009612 14 0.912 - - 0.912 - - - - - - chitinase, acidic.3 [Source:ZFIN;Acc:ZDB-GENE-040426-2891]
42. zgc:152698 32 0.912 - - 0.912 - - - - - - zgc:152698
43. or110-2 ENSDARG00000091172 1 0.912 - - 0.912 - - - - - - odorant receptor, family D, subfamily 110, member 2 [Source:ZFIN;Acc:ZDB-GENE-070806-76]
44. si:ch73-44m9.1 ENSDARG00000077115 3 0.912 - - 0.912 - - - - - - si:ch73-44m9.1 [Source:ZFIN;Acc:ZDB-GENE-081104-289]
45. si:dkey-91i10.7 si:dkey-91i10.7 9 0.912 - - 0.912 - - - - - -
46. si:ch73-138e16.6 ENSDARG00000101044 2 0.912 - - 0.912 - - - - - - si:ch73-138e16.6 [Source:ZFIN;Acc:ZDB-GENE-070705-205]
47. nr1d1 ENSDARG00000033160 3 0.912 - - 0.912 - - - - - - nuclear receptor subfamily 1, group d, member 1 [Source:ZFIN;Acc:ZDB-GENE-050105-1]
48. TMC5 ENSDARG00000013252 22 0.912 - - 0.912 - - - - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
49. si:dkeyp-104f11.9 ENSDARG00000096715 81 0.912 - - 0.912 - - - - - - si:dkeyp-104f11.9 [Source:ZFIN;Acc:ZDB-GENE-130603-41]
50. si:ch211-187d1.1 si:ch211-187d1.1 4 0.912 - - 0.912 - - - - - -
51. TRIM14_5 TRIM14_5 2 0.912 - - 0.912 - - - - - -
52. apba2b ENSDARG00000060639 2 0.91 - - 0.910 - - - - - - amyloid beta (A4) precursor protein-binding, family A, member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5371]
53. ZNF512B ENSDARG00000071055 7 0.91 - - 0.910 - - - - - - zinc finger protein 512B [Source:HGNC Symbol;Acc:HGNC:29212]
54. tnfsf12 ENSDARG00000069376, ENSDARG00000109341 49 0.902 - - - - 0.902 - - - - TNF superfamily member 12 [Source:ZFIN;Acc:ZDB-GENE-060929-376]
55. KCNK17 ENSDARG00000105453 16 0.901 0.901 - - - - - - - - potassium channel, subfamily K, member 17 [Source:ZFIN;Acc:ZDB-GENE-120113-3]
56. MTERFD2 MTERFD2 140 0.899 0.899 - - - - - - - -
57. si:dkey-27n6.5 23 0.894 - - 0.894 - - - - - - si:dkey-27n6.5
58. pus1 ENSDARG00000045562 114 0.893 0.893 - - - - - - - - pseudouridylate synthase 1 [Source:ZFIN;Acc:ZDB-GENE-041212-26]
59. si:ch73-234b20.6 si:ch73-234b20.6 23 0.893 - - 0.893 - - - - - -
60. si:dkey-32e6.3 ENSDARG00000092934 133 0.893 - - - - 0.893 - - - - si:dkey-32e6.3 [Source:ZFIN;Acc:ZDB-GENE-081104-408]
61. esr2a ENSDARG00000016454 23 0.892 - - 0.892 - - - - - - estrogen receptor 2a [Source:ZFIN;Acc:ZDB-GENE-030116-2]
62. PEG3_10 PEG3_10 45 0.89 - - - - 0.890 - - - -
63. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 0.885 - - - - - - - 0.885 - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
64. zgc:158446 36 0.882 - - 0.882 - - - - - - zgc:158446
65. SNORD27 SNORD27 181 0.881 - - 0.881 - - - - - -
66. foxg1a ENSDARG00000070769 928 0.877 0.877 - - - - - - - - forkhead box G1a [Source:ZFIN;Acc:ZDB-GENE-990415-267]
67. CU467824.1 CU467824.1 76 0.877 0.877 - - - - - - - -
68. insb ENSDARG00000034610, ENSDARG00000112105 60 0.877 0.877 - - - - - - - - preproinsulin b [Source:ZFIN;Acc:ZDB-GENE-040113-2]
69. plekhh2 ENSDARG00000040851, ENSDARG00000114477 14 0.877 0.877 - - - - - - - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-42]
70. epsti1 ENSDARG00000094578 33 0.877 0.877 - - - - - - - - epithelial stromal interaction 1 [Source:ZFIN;Acc:ZDB-GENE-081104-172]
71. rbbp9 ENSDARG00000040713 12 0.877 0.877 - - - - - - - - retinoblastoma binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-050208-692]
72. six7 ENSDARG00000070107 140 0.874 - - 0.874 - - - - - - SIX homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-990825-28]
73. CABZ01028403.3 CABZ01028403.3 4 0.874 - - 0.874 - - - - - -
74. mybpc1 ENSDARG00000045560 26 0.873 - - - - - - - 0.873 - myosin binding protein C, slow type [Source:ZFIN;Acc:ZDB-GENE-041114-196]
75. si:ch211-191j22.8 ENSDARG00000057039 20 0.872 - - 0.872 - - - - - - si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
76. si:dkey-267i17.3 si:dkey-267i17.3 4 0.872 - - 0.872 - - - - - -
77. NXPH4 11 0.872 - - 0.872 - - - - - - neurexophilin 4
78. TTF2 ENSDARG00000104105 564 0.867 - - - - - - 0.867 - - transcription termination factor, RNA polymerase II [Source:ZFIN;Acc:ZDB-GENE-110411-73]
79. CABZ01079241.1 ENSDARG00000098424 88 0.867 - - 0.867 - - - - - - zinc finger Y-chromosomal protein 1-like [Source:NCBI gene;Acc:563292]
80. grk7b ENSDARG00000055534 17 0.865 - - 0.865 - - - - - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
81. trim62 ENSDARG00000060901 12 0.865 - - 0.865 - - - - - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
82. nmba ENSDARG00000068144 9 0.865 - - 0.865 - - - - - - neuromedin Ba [Source:ZFIN;Acc:ZDB-GENE-050419-3]
83. TSC22D1 ENSDARG00000038306 517 0.864 - - - - - - - 0.864 - TSC22 domain family, member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7785]
84. rhbdd1 ENSDARG00000021046 120 0.862 - - - - - 0.862 - - - rhomboid domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050417-85]
85. fap ENSDARG00000078468 183 0.862 - - - - - 0.862 - - - fibroblast activation protein, alpha [Source:ZFIN;Acc:ZDB-GENE-081104-439]
86. si:ch211-218c6.9 si:ch211-218c6.9 40 0.862 - - - - 0.862 - - - -
87. cyp1b1 ENSDARG00000068934, ENSDARG00000113835 196 0.861 - - 0.861 - - - - - - cytochrome P450, family 1, subfamily B, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-030902-1]
88. si:ch211-212n6.18 si:ch211-212n6.18 233 0.861 - - 0.861 - - - - - -
89. vwa1 ENSDARG00000075468 77 0.861 - - 0.861 - - - - - - von Willebrand factor A domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5921]
90. ttc21b ENSDARG00000012368 229 0.86 0.860 - - - - - - - - tetratricopeptide repeat domain 21B [Source:ZFIN;Acc:ZDB-GENE-031010-34]
91. KCNB1 ENSDARG00000060095, ENSDARG00000112775 5 0.86 - - 0.860 - - - - - - potassium voltage-gated channel, Shab-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-090831-3]
92. KCNJ12 KCNJ12 17 0.86 - - - - 0.860 - - - -
93. pglyrp2 ENSDARG00000062998 11 0.86 - - - - 0.860 - - - - peptidoglycan recognition protein 2 [Source:ZFIN;Acc:ZDB-GENE-071227-1]
94. CU184872.1 CU184872.1 15 0.86 - - - - 0.860 - - - -
95. GRAMD2_1 GRAMD2_1 12 0.86 - - - - 0.860 - - - -
96. lrrtm4l1 ENSDARG00000080015 9 0.86 - - - - 0.860 - - - - leucine rich repeat transmembrane neuronal 4 like 1 [Source:ZFIN;Acc:ZDB-GENE-080327-15]
97. CABZ01117977.1 CABZ01117977.1 9 0.86 - - - - 0.860 - - - -
98. sema3e ENSDARG00000036571, ENSDARG00000116446 115 0.859 - - - - 0.859 - - - - sema domain, immunoglobulin domain (Ig), short basic domain, secreted, (semaphorin) 3E [Source:ZFIN;Acc:ZDB-GENE-030131-7864]
99. BX510922.1 ENSDARG00000101184 147 0.859 - - - - 0.859 - - - -
100. zgc:112966_1 ENSDARG00000095369, ENSDARG00000099057, ENSDARG00000101612 16 0.858 - - 0.858 - - - - - - zgc:112966 [Source:ZFIN;Acc:ZDB-GENE-050320-137]

There are 522 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA