Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnni1b

Gene Name Gene ID Reads Annotation
tnni1b ENSDARG00000052708 478 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]










Genes with expression patterns similar to tnni1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnni1b ENSDARG00000052708 478 7 - - 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
2. tnnc1a ENSDARG00000011400 165 5.502 - - 0.780 0.989 0.871 1.000 - 0.899 0.963 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
3. myl7 ENSDARG00000019096 1023 4.824 - - 0.946 0.977 0.984 - - 0.937 0.980 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
4. tnnt2a ENSDARG00000020610 313 4.744 - - 0.945 0.934 0.965 - - 0.922 0.978 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
5. vmhc 234 4.597 - - 0.882 0.927 0.981 - - 0.877 0.930 ventricular myosin heavy chain
6. cmlc1 ENSDARG00000032976 455 3.732 - - 0.929 0.963 - - - 0.883 0.957 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
7. nppa ENSDARG00000052960 295 3.715 - - - 0.874 0.964 - - 0.922 0.955 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
8. hspb12 139 3.642 - - 0.839 0.984 0.924 - - - 0.895 heat shock protein, alpha-crystallin-related, b12
9. fhl2a ENSDARG00000042018 244 3.608 - - 0.899 0.896 0.968 - - - 0.845 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
10. adprhl1 ENSDARG00000041589 34 3.188 - - - 0.754 0.963 - - 0.749 0.722 ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
11. csrp3 ENSDARG00000101706 21 2.656 - - - 0.946 - - - 0.934 0.776 cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
12. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 2.579 - - - - 0.948 - - 0.777 0.854 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
13. vmhcl 119 2.541 - - 0.772 - 0.853 - - - 0.916 ventricular myosin heavy chain-like
14. si:ch211-260o22.1 si:ch211-260o22.1 34 2.493 - - - 0.792 0.840 - - 0.861 -
15. hand2 ENSDARG00000008305 1214 2.41 - - - 0.737 - - - 0.802 0.871 heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
16. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1.83 - - - 0.830 - 1.000 - - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
17. fgf10b ENSDARG00000100475 17 1.828 - - - - - 1.000 - - 0.828 fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
18. ft2 ENSDARG00000109567 5 1.816 - - - - - 1.000 0.816 - - alpha(1,3)fucosyltransferase gene 2 [Source:ZFIN;Acc:ZDB-GENE-990715-18]
19. zymnd12 17 1.816 - - - - - 1.000 0.816 - - zinc finger, MYND-type containing 12, transcript variant X1
20. kcne4 ENSDARG00000068257 13 1.816 - - - - - 1.000 0.816 - - potassium voltage-gated channel, Isk-related family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050419-163]
21. mpg ENSDARG00000069729 43 1.783 - - - - - 1.000 0.783 - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
22. stm ENSDARG00000035694 1567 1.771 - - - - - 1.000 - - 0.771 starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
23. lft2 ENSDARG00000044059 46 1.77 - - 0.793 0.977 - - - - - lefty2 [Source:ZFIN;Acc:ZDB-GENE-990630-11]
24. mir148 75 1.767 - - - 0.851 - - - - 0.916 microRNA 148
25. BX530066.1 BX530066.1 42 1.767 - - - 0.767 - 1.000 - - -
26. BX323876.3 BX323876.3 19 1.758 - - - - - - - 0.843 0.915
27. si:ch211-132b12.7 ENSDARG00000068374 30 1.745 - - - 0.745 - 1.000 - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
28. ryr2b ENSDARG00000003706 6 1.73 - - - - 0.865 - - - 0.865 ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
29. CCDC141 ENSDARG00000095675 94 1.724 - - - 0.908 - - 0.816 - - coiled-coil domain containing 141 [Source:ZFIN;Acc:ZDB-GENE-081104-472]
30. si:dkey-220o21.5 si:dkey-220o21.5 24 1.719 - - - - - 1.000 0.719 - -
31. tm4sf4 ENSDARG00000040747 65 1.706 - - - - 0.825 0.881 - - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
32. hmx1 ENSDARG00000095651, ENSDARG00000109725, ENSDARG00000111765 151 1.685 - - 0.869 - - - 0.816 - - H6 family homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-080204-54]
33. si:ch211-190k17.31 si:ch211-190k17.31 29 1.682 - - - 0.920 - 0.762 - - -
34. ugt5f1 ENSDARG00000054835 2 1.673 - - - 0.857 - - 0.816 - - UDP glucuronosyltransferase 5 family, polypeptide F1 [Source:ZFIN;Acc:ZDB-GENE-100406-6]
35. rab44 ENSDARG00000028389 27 1.673 - - - 0.857 - - 0.816 - - RAB44, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040724-117]
36. CABZ01064671.1 ENSDARG00000039935 21 1.658 - - - - 0.803 - - 0.855 -
37. THBS1 THBS1 6 1.644 - - - - - - 0.816 - 0.828
38. otx1a 1607 1.633 - - 0.823 - 0.810 - - - - orthodenticle homeobox 1a
39. lrrc10 ENSDARG00000045612 3 1.617 - - - 0.789 - - - - 0.828 leucine rich repeat containing 10 [Source:ZFIN;Acc:ZDB-GENE-071119-6]
40. foxi1 ENSDARG00000104566 176 1.609 - - - - 0.756 - - - 0.853 forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
41. helt ENSDARG00000056400 482 1.596 - - 0.738 - 0.858 - - - - helt bHLH transcription factor [Source:ZFIN;Acc:ZDB-GENE-040824-6]
42. tcf7l2 ENSDARG00000004415, ENSDARG00000110486 1920 1.594 - - 0.854 - 0.740 - - - - transcription factor 7 like 2 [Source:ZFIN;Acc:ZDB-GENE-991110-8]
43. lmod2b ENSDARG00000045864 63 1.592 - - - 0.801 - - - 0.791 - leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
44. foxf2a ENSDARG00000017195 345 1.574 - - - 0.778 - - - 0.796 - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
45. COL9A1 COL9A1 264 1.562 - - - - - - - 0.828 0.734
46. acta2 ENSDARG00000045180 96 1.539 - - - - 0.733 - - - 0.806 actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
47. phox2a ENSDARG00000007406 470 1.536 - - - 0.720 0.816 - - - - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
48. efcab4bb efcab4bb 27 1.525 - - 0.756 - 0.769 - - - -
49. nipbla ENSDARG00000098272 26 1.522 - - - - - 0.762 0.760 - - nipped-B homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060526-121]
50. FOXL2 239 1.519 - - - - - - - 0.717 0.802 forkhead box L2, transcript variant X1
51. slc22a5 ENSDARG00000101021 20 1.502 - - - - 0.760 0.742 - - - solute carrier family 22 (organic cation/carnitine transporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-091012-1]
52. foxl1 ENSDARG00000008133, ENSDARG00000111418 64 1.497 - - - - 0.703 - - 0.794 - forkhead box L1 [Source:ZFIN;Acc:ZDB-GENE-040426-1181]
53. tbx2b ENSDARG00000006120, ENSDARG00000116135 1599 1.464 - - 0.756 - 0.708 - - - - T-box 2b [Source:ZFIN;Acc:ZDB-GENE-990726-27]
54. irx7 ENSDARG00000002601 72 1.447 - - - - 0.742 - - 0.705 - iroquois homeobox 7 [Source:ZFIN;Acc:ZDB-GENE-020103-1]
55. si:dkey-4j21.1 17 1 - - - - - 1.000 - - - si:dkey-4j21.1, transcript variant X2
56. zgc:171500 ENSDARG00000071553 2 1 - - - - - 1.000 - - - zgc:171500 [Source:ZFIN;Acc:ZDB-GENE-080204-9]
57. dnah11 ENSDARG00000077384, ENSDARG00000094282 15 1 - - - - - 1.000 - - - dynein, axonemal, heavy chain 11 [Source:ZFIN;Acc:ZDB-GENE-100922-8]
58. si:dkey-257e4.2 si:dkey-257e4.2 0 1 - - - - - 1.000 - - -
59. CABZ01074946.1 CABZ01074946.1 119 1 - - - - - 1.000 - - -
60. ehf ENSDARG00000052115, ENSDARG00000112589 24 1 - - - - - 1.000 - - - ets homologous factor [Source:ZFIN;Acc:ZDB-GENE-060312-7]
61. OMA1 ENSDARG00000090503 19 1 - - - - - 1.000 - - - OMA1 zinc metallopeptidase [Source:ZFIN;Acc:ZDB-GENE-091204-124]
62. si:dkeyp-80d11.4 ENSDARG00000103254 13 1 - - - - - 1.000 - - - si:dkeyp-80d11.4 [Source:ZFIN;Acc:ZDB-GENE-060503-184]
63. CT573468.1 CT573468.1 283 1 - - - - - 1.000 - - -
64. rilpl1 0 1 - - - - - 1.000 - - - Rab interacting lysosomal protein-like 1
65. si:ch211-117i10.10 si:ch211-117i10.10 18 1 - - - - - 1.000 - - -
66. BX323876.2 ENSDARG00000104577 62 1 - - - - - 1.000 - - -
67. hsh2d ENSDARG00000042908, ENSDARG00000110717 91 1 - - - - - 1.000 - - - hematopoietic SH2 domain containing [Source:ZFIN;Acc:ZDB-GENE-050410-3]
68. sult1st8 sult1st8 6 1 - - - - - 1.000 - - -
69. cryba1l1 ENSDARG00000032929 1868 1 - - - - - 1.000 - - - crystallin, beta A1, like 1 [Source:ZFIN;Acc:ZDB-GENE-050417-249]
70. si:dkey-103j14.5 ENSDARG00000002219 0 1 - - - - - 1.000 - - - si:dkey-103j14.5 [Source:ZFIN;Acc:ZDB-GENE-090313-170]
71. sema6e ENSDARG00000000189 35 1 - - - - - 1.000 - - - sema domain, transmembrane domain (TM), and cytoplasmic domain, (semaphorin) 6E [Source:ZFIN;Acc:ZDB-GENE-040724-119]
72. axdnd1 ENSDARG00000062355 30 1 - - - - - 1.000 - - - axonemal dynein light chain domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050208-341]
73. supt7l ENSDARG00000013461 41 1 - - - - - 1.000 - - - SPT7-like STAGA complex gamma subunit [Source:ZFIN;Acc:ZDB-GENE-050227-17]
74. AL929092.2 AL929092.2 0 1 - - - - - 1.000 - - -
75. si:dkey-192l18.9 ENSDARG00000077878 10 1 - - - - - 1.000 - - - si:dkey-192l18.9 [Source:ZFIN;Acc:ZDB-GENE-120709-25]
76. zgc:66024 ENSDARG00000068840, ENSDARG00000068846 37 1 - - - - - 1.000 - - - zgc:66024 [Source:ZFIN;Acc:ZDB-GENE-040426-1511]
77. msgn1 ENSDARG00000070546 188 1 - - - - - 1.000 - - - mesogenin 1 [Source:ZFIN;Acc:ZDB-GENE-030722-1]
78. si:dkey-153k10.14 si:dkey-153k10.14 0 1 - - - - - 1.000 - - -
79. SNORA81_1 SNORA81_1 8 1 - - - - - 1.000 - - -
80. CU302326.3 CU302326.3 6 1 - - - - - 1.000 - - -
81. BX000477.1 BX000477.1 1 1 - - - - - 1.000 - - -
82. syne3 ENSDARG00000023237 23 1 - - - - - 1.000 - - - spectrin repeat containing, nuclear envelope family member 3 [Source:ZFIN;Acc:ZDB-GENE-070209-271]
83. ZBTB32 ENSDARG00000073726 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
84. CABZ01053592.1 ENSDARG00000117388 6 1 - - - - - 1.000 - - -
85. oca2 ENSDARG00000061303 22 1 - - - - - 1.000 - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
86. PLEKHS1_1 PLEKHS1_1 23 1 - - - - - 1.000 - - -
87. BX321875.5_1 BX321875.5_1 0 1 - - - - - 1.000 - - -
88. ftr76 ENSDARG00000076093 1 1 - - - - - 1.000 - - - finTRIM family, member 76 [Source:ZFIN;Acc:ZDB-GENE-090508-15]
89. si:dkey-8o9.6 si:dkey-8o9.6 0 1 - - - - - 1.000 - - -
90. RECK ENSDARG00000090039 15 1 - - - - - 1.000 - - - reversion-inducing-cysteine-rich protein with kazal motifs [Source:ZFIN;Acc:ZDB-GENE-070117-37]
91. polk ENSDARG00000059963 5 1 - - - - - 1.000 - - - polymerase (DNA directed) kappa [Source:ZFIN;Acc:ZDB-GENE-060526-137]
92. BX537113.1_1 BX537113.1_1 3 1 - - - - - 1.000 - - -
93. si:dkeyp-4f2.6 ENSDARG00000095596 3 1 - - - - - 1.000 - - - si:dkeyp-4f2.6 [Source:ZFIN;Acc:ZDB-GENE-110914-212]
94. HPX ENSDARG00000012609 781 1 - - - - - 1.000 - - - hemopexin [Source:ZFIN;Acc:ZDB-GENE-030131-5773]
95. RBBP6_8 RBBP6_8 10 1 - - - - - 1.000 - - -
96. tmem168b ENSDARG00000062168 17 1 - - - - - 1.000 - - - transmembrane protein 168b [Source:ZFIN;Acc:ZDB-GENE-090406-3]
97. slc18a2 ENSDARG00000015110, ENSDARG00000115207 6 1 - - - - - 1.000 - - - solute carrier family 18 (vesicular monoamine transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-080514-1]
98. nfil3-4 ENSDARG00000092346 3 1 - - - - - 1.000 - - - nuclear factor, interleukin 3 regulated, member 4 [Source:ZFIN;Acc:ZDB-GENE-070424-214]
99. SLC39A11 ENSDARG00000098194 23 1 - - - - - 1.000 - - - solute carrier family 39 member 11 [Source:HGNC Symbol;Acc:HGNC:14463]
100. pwwp2b ENSDARG00000101080 138 1 - - - - - 1.000 - - - PWWP domain containing 2B [Source:ZFIN;Acc:ZDB-GENE-110930-2]

There are 741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA