Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnni1al

Gene Name Gene ID Reads Annotation
tnni1al 8272 troponin I, skeletal, slow like, transcript variant X1










Genes with expression patterns similar to tnni1al

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnni1al 8272 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin I, skeletal, slow like, transcript variant X1
2. tmem161a ENSDARG00000012790 16094 4.023 0.846 - 0.793 0.712 - 0.921 - - 0.751 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
3. tmem38a ENSDARG00000024047 41883 3.432 0.870 - 0.847 0.835 - - - 0.880 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
4. casq2 ENSDARG00000008982 21802 3.413 0.863 - 0.825 - - 0.891 - 0.834 - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
5. vcl vcl 6667 3.407 0.861 - 0.859 - - 0.881 - - 0.806
6. mybpc3 ENSDARG00000011615 7271 3.38 - - - - - 0.877 0.990 0.747 0.766 myosin binding protein C, cardiac [Source:ZFIN;Acc:ZDB-GENE-070112-2362]
7. tnni2b.1 ENSDARG00000035958 51597 3.354 0.800 - 0.818 - - - 0.931 0.805 - troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
8. tnnt2d ENSDARG00000002988 7590 3.241 0.878 - - 0.740 - - - 0.831 0.792 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
9. tmod4 ENSDARG00000020890 17436 3.237 - 0.967 0.742 0.761 - - - - 0.767 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
10. tpma ENSDARG00000033683 752432 3.221 0.797 - 0.842 0.757 - - - 0.825 - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
11. pvalb4 ENSDARG00000024433 35736 3.195 0.942 - 0.754 0.713 - - - 0.786 - parvalbumin 4 [Source:ZFIN;Acc:ZDB-GENE-040625-48]
12. zgc:66286 zgc:66286 118947 3.194 0.909 - - - - 0.756 0.732 0.797 -
13. desma ENSDARG00000058656 30292 3.173 0.853 - 0.863 0.726 - - - 0.731 - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
14. nexn ENSDARG00000057317 10972 3.163 0.857 - 0.801 0.710 - - - - 0.795 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
15. eno1a ENSDARG00000022456, ENSDARG00000116458 14401 3.151 0.832 - 0.780 0.811 - - - 0.728 - enolase 1a, (alpha) [Source:ZFIN;Acc:ZDB-GENE-030131-6048]
16. tnnt3a ENSDARG00000030270 112506 3.135 0.839 - 0.796 0.755 - - - - 0.745 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
17. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.126 0.773 - 0.873 - - - - 0.767 0.713 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
18. klhl40b ENSDARG00000019125 3633 3.121 0.794 - 0.766 - - 0.850 - - 0.711 kelch-like family member 40b [Source:ZFIN;Acc:ZDB-GENE-060227-1]
19. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.115 0.790 - 0.745 0.724 - 0.856 - - - nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
20. SYNPO2L SYNPO2L 6697 3.105 0.812 - 0.744 - - - - 0.769 0.780
21. ckmb ENSDARG00000040565 505935 3.093 0.714 - 0.821 0.846 - - - 0.712 - creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
22. si:ch211-156j16.1 ENSDARG00000092035 7441 3.086 0.808 - 0.793 - - - - 0.715 0.770 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
23. srl ENSDARG00000104587 11126 3.068 0.812 - 0.747 0.740 - - - 0.769 - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
24. apobec2a ENSDARG00000018881 4790 3.058 0.788 - - 0.764 - - - 0.759 0.747 apolipoprotein B mRNA editing enzyme, catalytic polypeptide-like 2a [Source:ZFIN;Acc:ZDB-GENE-050306-15]
25. tnnc1b ENSDARG00000037539 13945 3.016 - - 0.760 - 0.745 - - 0.726 0.785 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
26. myhz1.3 ENSDARG00000067997 155509 3.01 0.790 - 0.778 0.739 - - - 0.703 - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
27. hhatla ENSDARG00000039051 6598 3.008 0.819 - 0.707 0.739 0.743 - - - - hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
28. slc25a4 ENSDARG00000027355, ENSDARG00000112318 17542 2.972 0.749 - 0.750 0.745 - - - 0.728 - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5275]
29. mybpc2b ENSDARG00000021265 9618 2.946 0.783 - 0.724 0.715 - - - 0.724 - myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
30. chst11 ENSDARG00000034375 2701 2.611 0.797 0.984 - - - 0.830 - - - carbohydrate (chondroitin 4) sulfotransferase 11 [Source:ZFIN;Acc:ZDB-GENE-040315-1]
31. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 2.599 - - - - - - 0.998 0.802 0.799 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
32. smyd2b ENSDARG00000005629 8181 2.586 0.855 - - - - - 0.991 - 0.740 SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
33. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 2.545 0.914 - - - - - - 0.791 0.840 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
34. znf106a ENSDARG00000016651 6049 2.486 0.821 - - 0.761 - 0.904 - - - zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
35. pgam2 ENSDARG00000057571 23387 2.476 0.855 - - 0.791 - - - 0.830 - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
36. klhl31 ENSDARG00000039066 13656 2.438 - - 0.813 - - - - 0.793 0.832 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
37. acta1b ENSDARG00000055618 195597 2.423 0.809 - 0.841 - - - - 0.773 - actin, alpha 1b, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-030131-55]
38. zgc:92518 ENSDARG00000016343 3837 2.416 0.811 - 0.821 0.784 - - - - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
39. tgm2a ENSDARG00000070157 4516 2.412 0.874 - 0.823 0.715 - - - - - transglutaminase 2, C polypeptide A [Source:ZFIN;Acc:ZDB-GENE-040912-78]
40. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 2.405 0.819 - 0.824 0.762 - - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
41. klhl41b ENSDARG00000006757 10762 2.404 0.861 - - - - - - 0.806 0.737 kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
42. sgcb ENSDARG00000052341 4168 2.404 - - - 0.809 - 0.888 - - 0.707 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
43. txlnbb ENSDARG00000076241 6396 2.387 0.871 - 0.755 - - - - - 0.761 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
44. tpm2 ENSDARG00000104682 36853 2.379 0.814 - - - - 0.832 - 0.733 - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
45. mdh2 ENSDARG00000043371 14485 2.371 0.824 - 0.754 - - - - - 0.793 malate dehydrogenase 2, NAD (mitochondrial) [Source:ZFIN;Acc:ZDB-GENE-040426-2143]
46. NRAP ENSDARG00000009341 3565 2.357 0.890 - - 0.740 - - - 0.727 - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
47. murca murca 6614 2.355 0.841 - 0.726 - - - - - 0.788
48. tnni2a.4 ENSDARG00000029069 122344 2.354 0.834 - 0.736 - - - - 0.784 - troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
49. actn3b ENSDARG00000001431 15747 2.343 0.855 - 0.785 0.703 - - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
50. atp2a1 ENSDARG00000020574 291561 2.338 0.820 - 0.791 - - - - 0.727 - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
51. mylz3 ENSDARG00000017441 303597 2.337 0.771 - 0.798 0.768 - - - - - myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
52. si:ch211-114n24.7 si:ch211-114n24.7 2544 2.305 0.822 - 0.783 0.700 - - - - -
53. chrna1 ENSDARG00000009021 2931 2.302 0.785 - - 0.771 - - - - 0.746 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
54. mdh1b ENSDARG00000018008 3196 2.301 0.807 - 0.733 - - - - - 0.761 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
55. trim55a ENSDARG00000029596 2858 2.301 0.823 - - 0.716 - - - - 0.762 tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
56. zgc:158296 ENSDARG00000070923 3935 2.299 - - 0.713 0.765 - - - - 0.821 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
57. myoz1b ENSDARG00000071445 13381 2.283 0.841 - 0.709 - - - - 0.733 - myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
58. AIMP1 ENSDARG00000060036 4136 2.281 0.771 - 0.729 - - - - 0.781 - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
59. si:ch211-226o13.2 84923 2.281 - - 0.824 0.755 - - - - 0.702 si:ch211-226o13.2
60. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.281 0.817 - 0.702 0.762 - - - - - si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
61. pbxip1a ENSDARG00000071015 4960 2.264 0.839 - 0.724 0.701 - - - - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
62. xirp2a ENSDARG00000071113 7113 2.263 0.828 - - 0.716 - - - - 0.719 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
63. rtn2a ENSDARG00000016088 12184 2.261 0.841 - 0.717 - - - - 0.703 - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
64. sucla2 ENSDARG00000005359 5992 2.255 0.811 - - - - - - 0.709 0.735 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
65. jph2 ENSDARG00000028625 6706 2.255 0.842 - - 0.709 - - - 0.704 - junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
66. rp42-pen rp42-pen 3395 2.253 - - 0.734 0.777 - - - - 0.742
67. asb5b ENSDARG00000053222 1207 2.252 0.842 - - - - - - 0.708 0.702 ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
68. gapdh ENSDARG00000043457 68684 2.251 - - 0.726 0.778 - - - 0.747 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
69. CR847973.1 ENSDARG00000115516 8754 2.231 0.771 - - 0.729 - - - - 0.731
70. cfl2 ENSDARG00000014106 8051 2.23 0.704 - 0.798 - - - - - 0.728 cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
71. EHBP1L1 EHBP1L1 2500 2.227 0.736 - 0.750 - - - - 0.741 -
72. txlnba ENSDARG00000020594 9385 2.224 - - 0.745 - - - - 0.707 0.772 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
73. tmem182 tmem182 12589 2.214 - - 0.718 0.734 - - - 0.762 -
74. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.21 0.720 - 0.737 - - - - 0.753 - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
75. BX324201.1 BX324201.1 3302 2.207 0.753 - 0.733 - - - - 0.721 -
76. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 2.205 - - 0.743 0.729 - - - - 0.733 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
77. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.204 0.784 - 0.712 - - - - - 0.708
78. ahsa1 ahsa1 2012 2.199 0.725 - 0.722 - 0.752 - - - -
79. kpnb1 ENSDARG00000104889 9282 1.93 - 0.941 - - - - 0.989 - - karyopherin (importin) beta 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2579]
80. tars ENSDARG00000013250, ENSDARG00000110996, ENSDARG00000113759 4599 1.794 - 0.971 - - - 0.823 - - - threonyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-041010-218]
81. mrpl22 ENSDARG00000109961 1374 1.79 0.852 0.938 - - - - - - - mitochondrial ribosomal protein L22 [Source:ZFIN;Acc:ZDB-GENE-080303-28]
82. glulb ENSDARG00000100003, ENSDARG00000113742 19292 1.785 - - - - - 0.795 0.990 - - glutamate-ammonia ligase (glutamine synthase) b [Source:ZFIN;Acc:ZDB-GENE-030131-8417]
83. selt2 12741 1.758 0.769 - - - - - 0.989 - - selenoprotein T, 2
84. C11H6orf120 C11H6orf120 824 1.752 0.823 0.929 - - - - - - -
85. col11a1a ENSDARG00000026165, ENSDARG00000115341 43138 1.733 0.783 - - - - - 0.950 - - collagen, type XI, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-070209-167]
86. hhatlb ENSDARG00000005139 6674 1.726 0.861 - - - - - - 0.865 - hedgehog acyltransferase like, b [Source:ZFIN;Acc:ZDB-GENE-050506-130]
87. tpd52l2a ENSDARG00000027154 4359 1.709 - 0.910 - - - 0.799 - - - tumor protein D52-like 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7047]
88. ARHGAP35 2409 1.706 - 0.902 - - - 0.804 - - - Rho GTPase activating protein 35b, transcript variant X2
89. vps13a ENSDARG00000039225 3151 1.701 - 0.897 - - - 0.804 - - - vacuolar protein sorting 13 homolog A (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030926-1]
90. crls1 ENSDARG00000038000 1088 1.7 0.741 0.959 - - - - - - - cardiolipin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2519]
91. pygma ENSDARG00000055518 15972 1.697 0.854 - - - - - - 0.843 - phosphorylase, glycogen, muscle A [Source:ZFIN;Acc:ZDB-GENE-050522-482]
92. si:dkeyp-113d7.4 si:dkeyp-113d7.4 33767 1.694 0.734 0.960 - - - - - - -
93. txndc5 ENSDARG00000009342 5387 1.693 - 0.885 - - - 0.808 - - - thioredoxin domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1951]
94. murcb murcb 13655 1.683 0.876 - - 0.807 - - - - -
95. zgc:86709 ENSDARG00000110511, ENSDARG00000111417 22785 1.676 0.806 - - - - - - 0.870 - zgc:86709 [Source:ZFIN;Acc:ZDB-GENE-040625-35]
96. rps23 ENSDARG00000021838 145026 1.662 0.737 - - - - - 0.925 - - ribosomal protein S23 [Source:ZFIN;Acc:ZDB-GENE-080220-50]
97. smyd1b ENSDARG00000091253 4964 1.66 0.922 - - - - - - - 0.738 SET and MYND domain containing 1b [Source:ZFIN;Acc:ZDB-GENE-060522-1]
98. sncga ENSDARG00000034423, ENSDARG00000112260 5469 1.659 - - - - - - - 0.820 0.839 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
99. C22H19orf70 C22H19orf70 4393 1.658 0.706 0.952 - - - - - - -
100. cav3 ENSDARG00000024141 14906 1.656 - - - 0.740 - 0.916 - - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]

There are 937 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA