Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tnnc1b

Gene Name Gene ID Reads Annotation
tnnc1b ENSDARG00000037539 13945 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]










Genes with expression patterns similar to tnnc1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnnc1b ENSDARG00000037539 13945 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 troponin C type 1b (slow) [Source:ZFIN;Acc:ZDB-GENE-040625-62]
2. txlnbb ENSDARG00000076241 6396 5.719 - 0.957 0.803 - 0.734 0.859 0.887 0.707 0.772 taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
3. nexn ENSDARG00000057317 10972 5.067 - - 0.855 0.834 0.816 0.865 0.959 - 0.738 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
4. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 5.023 - 0.939 0.755 0.815 0.776 0.888 0.850 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
5. tmem182 tmem182 12589 4.948 0.748 - 0.816 0.846 - 0.829 0.947 0.762 -
6. myl10 ENSDARG00000062592 101207 4.826 - - 0.829 0.808 0.872 0.777 0.743 0.797 - myosin, light chain 10, regulatory [Source:ZFIN;Acc:ZDB-GENE-050417-421]
7. rp42-pen rp42-pen 3395 4.824 - 0.929 0.749 0.703 0.716 0.836 0.891 - -
8. klhl40a ENSDARG00000039052 2537 4.799 - 0.878 0.769 - 0.704 0.827 0.879 - 0.742 kelch-like family member 40a [Source:ZFIN;Acc:ZDB-GENE-050916-1]
9. txlnba ENSDARG00000020594 9385 4.784 - - 0.834 0.728 0.734 - 0.924 0.733 0.831 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
10. hsp90aa1.1 ENSDARG00000010478 47784 4.776 0.758 - 0.715 0.803 0.828 0.789 0.883 - - heat shock protein 90, alpha (cytosolic), class A member 1, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-990415-94]
11. klhl31 ENSDARG00000039066 13656 4.705 0.731 - 0.820 0.821 0.775 - 0.797 - 0.761 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
12. klhl41b ENSDARG00000006757 10762 4.281 - - 0.864 0.802 0.854 0.827 0.934 - - kelch-like family member 41b [Source:ZFIN;Acc:ZDB-GENE-030131-9875]
13. smyhc1 ENSDARG00000099959, ENSDARG00000115916 48476 4.261 - - 0.876 0.732 0.864 - - 0.874 0.915 slow myosin heavy chain 1 [Source:ZFIN;Acc:ZDB-GENE-030131-271]
14. CU633479.5 ENSDARG00000114818 1815 4.225 - 0.922 0.701 - - 0.825 0.959 - 0.818
15. chrna1 ENSDARG00000009021 2931 4.207 - 0.897 0.766 - - 0.825 0.914 - 0.805 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
16. PTPLA PTPLA 4044 4.183 - 0.922 0.712 0.861 - 0.787 0.901 - -
17. xirp2a ENSDARG00000071113 7113 4.154 - 0.861 - - - 0.848 0.930 0.717 0.798 xin actin binding repeat containing 2a [Source:ZFIN;Acc:ZDB-GENE-040108-7]
18. cacng1 cacng1 3118 4.133 - 0.927 0.840 - 0.725 0.748 0.893 - -
19. myoz2b ENSDARG00000037266 2139 4.128 - 0.902 0.700 - - 0.818 0.968 - 0.740 myozenin 2b [Source:ZFIN;Acc:ZDB-GENE-040426-1853]
20. zgc:158296 ENSDARG00000070923 3935 4.126 - 0.859 0.774 - - 0.835 0.922 - 0.736 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
21. ntmt1 ENSDARG00000022399 5779 4.095 - 0.958 - 0.701 0.810 0.721 0.905 - - N-terminal Xaa-Pro-Lys N-methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2055]
22. nmrk2 ENSDARG00000067848 10293 4.073 0.761 0.901 - - 0.730 - 0.974 0.707 - nicotinamide riboside kinase 2 [Source:ZFIN;Acc:ZDB-GENE-040912-44]
23. fxr2 ENSDARG00000016260, ENSDARG00000116730 10030 4.066 - - - 0.784 0.776 0.857 0.918 - 0.731 fragile X mental retardation, autosomal homolog 2 [Source:ZFIN;Acc:ZDB-GENE-040426-943]
24. MYOM3 2720 4.06 - 0.859 0.741 - - 0.847 0.898 - 0.715 myomesin 3, transcript variant X2
25. AIMP1 ENSDARG00000060036 4136 4.055 - 0.920 0.766 0.746 0.806 0.817 - - - aminoacyl tRNA synthetase complex-interacting multifunctional protein 1 [Source:ZFIN;Acc:ZDB-GENE-060825-144]
26. ppapdc3 ppapdc3 4924 4.049 - - 0.738 0.782 0.753 0.847 0.929 - -
27. zgc:153662 zgc:153662 4604 4.041 - 0.851 0.780 - 0.767 - 0.916 0.727 -
28. si:ch211-207e19.11 si:ch211-207e19.11 9604 4.039 - - 0.880 0.709 0.783 - 0.809 - 0.858
29. PTGES3L PTGES3L 4801 3.962 - - 0.737 - 0.715 0.829 0.880 - 0.801
30. CABZ01079764.1 CABZ01079764.1 12103 3.901 - - - 0.761 - 0.702 0.807 0.809 0.822
31. sncga ENSDARG00000034423, ENSDARG00000112260 5469 3.778 - 0.703 - 0.737 0.709 - 0.806 - 0.823 synuclein, gamma a [Source:ZFIN;Acc:ZDB-GENE-050417-18]
32. alpk3a ENSDARG00000078989 1992 3.416 - 0.942 - - 0.799 0.748 0.927 - - alpha-kinase 3a [Source:ZFIN;Acc:ZDB-GENE-050419-48]
33. smtnl1 ENSDARG00000041257 7410 3.412 - - - 0.869 - 0.825 0.971 - 0.747 smoothelin-like 1 [Source:ZFIN;Acc:ZDB-GENE-050306-23]
34. ryr1b ENSDARG00000023797 5693 3.41 - 0.955 0.768 - 0.766 - 0.921 - - ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
35. txnipb ENSDARG00000070000 2365 3.409 - 0.814 - - - 0.875 0.966 0.754 - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
36. trim55a ENSDARG00000029596 2858 3.391 - 0.916 0.768 - - 0.879 0.828 - - tripartite motif containing 55a [Source:ZFIN;Acc:ZDB-GENE-040718-50]
37. ATP5J_2 ATP5J_2 2381 3.389 - 0.814 - - - 0.771 0.956 - 0.848
38. DNAJA4 ENSDARG00000051762 5657 3.37 - 0.880 0.791 - - 0.776 0.923 - - DnaJ heat shock protein family (Hsp40) member A4 [Source:HGNC Symbol;Acc:HGNC:14885]
39. smyd2b ENSDARG00000005629 8181 3.364 - 0.928 - - 0.811 0.847 - 0.778 - SET and MYND domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-041001-201]
40. limch1a ENSDARG00000074275 2981 3.362 - 0.933 0.758 - - 0.775 0.896 - - LIM and calponin homology domains 1a [Source:ZFIN;Acc:ZDB-GENE-090312-153]
41. tnni2b.1 ENSDARG00000035958 51597 3.352 - - 0.905 - 0.836 - - 0.722 0.889 troponin I type 2b (skeletal, fast), tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050417-49]
42. TENC1 TENC1 1729 3.342 - 0.901 - - - 0.789 0.903 - 0.749
43. MUSTN1 MUSTN1 1882 3.334 - 0.843 - - - 0.799 0.939 - 0.753
44. zgc:92518 ENSDARG00000016343 3837 3.332 - - 0.758 - 0.804 0.844 0.926 - - zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
45. srl ENSDARG00000104587 11126 3.327 - 0.943 - 0.701 0.718 - 0.965 - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
46. tnnt2c ENSDARG00000032242 28801 3.311 - - - 0.708 0.900 - 0.968 - 0.735 troponin T2c, cardiac [Source:ZFIN;Acc:ZDB-GENE-030520-1]
47. MYOT ENSDARG00000076312 1791 3.292 - 0.890 - - 0.722 0.800 0.880 - - myotilin [Source:ZFIN;Acc:ZDB-GENE-110411-129]
48. stac3 ENSDARG00000098883 1765 3.29 - 0.869 0.708 - - 0.787 0.926 - - SH3 and cysteine rich domain 3 [Source:ZFIN;Acc:ZDB-GENE-040801-248]
49. tgm1l1 ENSDARG00000102106 1437 3.272 - 0.924 - 0.795 - 0.717 0.836 - - transglutaminase 1 like 1 [Source:ZFIN;Acc:ZDB-GENE-060503-139]
50. myod1 ENSDARG00000030110 6019 3.26 - 0.865 - - - 0.786 0.892 - 0.717 myogenic differentiation 1 [Source:ZFIN;Acc:ZDB-GENE-980526-561]
51. vcl vcl 6667 3.254 - 0.915 0.739 - - - - 0.813 0.787
52. mef2ca ENSDARG00000029764 18547 3.251 - 0.823 0.871 - 0.840 - - - 0.717 myocyte enhancer factor 2ca [Source:ZFIN;Acc:ZDB-GENE-980526-253]
53. tmem38a ENSDARG00000024047 41883 3.237 - - 0.879 0.743 0.833 - - 0.782 - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
54. NRAP ENSDARG00000009341 3565 3.232 - 0.869 0.713 - - 0.738 0.912 - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
55. mdh1b ENSDARG00000018008 3196 3.215 - 0.775 0.750 - - 0.760 0.930 - - malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
56. si:ch211-156j16.1 ENSDARG00000092035 7441 3.214 - - 0.804 - 0.741 - 0.910 - 0.759 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
57. myom1a ENSDARG00000061249 10230 3.204 0.708 - 0.770 - - 0.793 0.933 - - myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
58. ahsa1 ahsa1 2012 3.179 - - 0.713 - 0.841 0.775 0.850 - -
59. sucla2 ENSDARG00000005359 5992 3.175 - 0.877 0.766 - - 0.824 - - 0.708 succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
60. tpm2 ENSDARG00000104682 36853 3.173 0.821 - - 0.759 0.843 - - 0.750 - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
61. DUSP27 ENSDARG00000099889 1197 3.166 - 0.859 - - - 0.772 0.830 - 0.705 dual specificity phosphatase 27 [Source:ZFIN;Acc:ZDB-GENE-140513-1]
62. slc43a1b ENSDARG00000037748 1406 3.142 - 0.897 0.753 - - 0.711 0.781 - - solute carrier family 43 (amino acid system L transporter), member 1b [Source:ZFIN;Acc:ZDB-GENE-070209-173]
63. svila ENSDARG00000055075, ENSDARG00000110002, ENSDARG00000114888 4078 3.14 - - 0.722 - 0.731 0.762 0.925 - - supervillin a [Source:ZFIN;Acc:ZDB-GENE-990706-5]
64. ITGB1BP2 ENSDARG00000030176 2472 3.139 - 0.854 - - 0.714 - 0.839 - 0.732 integrin subunit beta 1 binding protein 2 [Source:HGNC Symbol;Acc:HGNC:6154]
65. tmem161a ENSDARG00000012790 16094 3.123 - - 0.864 0.752 0.799 - 0.708 - - transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
66. SYNPO2 SYNPO2 7382 3.117 0.725 - - 0.804 - 0.870 - - 0.718
67. myhz2 ENSDARG00000012944 69921 3.111 - - 0.709 - 0.761 - 0.939 0.702 - myosin, heavy polypeptide 2, fast muscle specific [Source:ZFIN;Acc:ZDB-GENE-020604-1]
68. zgc:66286 zgc:66286 118947 3.091 - - 0.746 - 0.861 - - 0.770 0.714
69. si:dkeyp-12a9.5 3058 3.027 - - 0.738 - - 0.712 0.832 - 0.745 si:dkeyp-12a9.5
70. cox17 ENSDARG00000069920, ENSDARG00000114117 5591 3.026 - - 0.767 0.703 - - 0.831 - 0.725 cytochrome c oxidase copper chaperone COX17 [Source:ZFIN;Acc:ZDB-GENE-040912-91]
71. tnni1al 8272 3.016 - - 0.760 - 0.745 - - 0.726 0.785 troponin I, skeletal, slow like, transcript variant X1
72. tpma ENSDARG00000033683 752432 3.001 - - 0.753 0.743 0.718 - 0.787 - - alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
73. tnnt2e ENSDARG00000045822, ENSDARG00000109924 3288 2.783 - - - - - 0.920 0.969 - 0.894 troponin T2e, cardiac [Source:ZFIN;Acc:ZDB-GENE-041210-27]
74. sptb ENSDARG00000030490 7128 2.768 - 0.944 - - - 0.856 0.968 - - spectrin, beta, erythrocytic [Source:ZFIN;Acc:ZDB-GENE-000906-1]
75. tnnt2d ENSDARG00000002988 7590 2.749 - 0.863 - - - 0.911 0.975 - - troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
76. ryr3 ENSDARG00000071331 6795 2.719 - 0.918 - - - 0.877 0.924 - - ryanodine receptor 3 [Source:ZFIN;Acc:ZDB-GENE-041001-165]
77. trdn ENSDARG00000041779 4283 2.709 - 0.880 - - - 0.882 0.947 - - triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
78. jph1a ENSDARG00000058603 2852 2.687 - 0.915 - - - 0.861 0.911 - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
79. chrnd ENSDARG00000019342 2728 2.677 - 0.926 0.824 - - - 0.927 - - cholinergic receptor, nicotinic, delta (muscle) [Source:ZFIN;Acc:ZDB-GENE-030131-6665]
80. vwde ENSDARG00000103443 5758 2.669 - 0.936 - - - 0.756 0.977 - - von Willebrand factor D and EGF domains [Source:ZFIN;Acc:ZDB-GENE-060929-1226]
81. sh3bgr ENSDARG00000021633 3498 2.669 - 0.895 - - - 0.820 0.954 - - SH3 domain binding glutamate-rich protein [Source:ZFIN;Acc:ZDB-GENE-040801-27]
82. fitm1 ENSDARG00000056464 1759 2.618 - 0.896 - - - 0.820 0.902 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
83. myhc4 ENSDARG00000035438 1322 2.612 - 0.911 - - - 0.778 0.923 - - myosin heavy chain 4 [Source:ZFIN;Acc:ZDB-GENE-030131-6206]
84. C13H10orf71 3489 2.605 - 0.939 0.713 - - - 0.953 - - chromosome 13 C10orf71 homolog
85. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 2.602 - - 0.836 - 0.829 - 0.937 - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
86. TRIM63 TRIM63 1600 2.591 - 0.830 - - - 0.857 0.904 - -
87. asb5b ENSDARG00000053222 1207 2.588 - 0.885 - - - 0.822 0.881 - - ankyrin repeat and SOCS box containing 5b [Source:ZFIN;Acc:ZDB-GENE-050417-271]
88. cyp4t8 ENSDARG00000004964, ENSDARG00000116412 1111 2.575 - 0.939 0.869 - - - 0.767 - - cytochrome P450, family 4, subfamily T, polypeptide 8 [Source:ZFIN;Acc:ZDB-GENE-031219-3]
89. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.562 - 0.918 - 0.744 - - 0.900 - - ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
90. COL22A1 COL22A1 4473 2.561 - 0.855 - - - - 0.904 0.802 -
91. mybphb ENSDARG00000003081 5208 2.557 - 0.914 - - 0.740 - 0.903 - - myosin binding protein Hb [Source:ZFIN;Acc:ZDB-GENE-030131-9794]
92. gypc ENSDARG00000041546 1487 2.552 - 0.907 - - - 0.759 0.886 - - glycophorin C (Gerbich blood group) [Source:ZFIN;Acc:ZDB-GENE-030131-7930]
93. CR392006.1 CR392006.1 1401 2.55 - 0.907 - - - 0.719 0.924 - -
94. CR847973.1 ENSDARG00000115516 8754 2.549 - 0.850 - - - 0.807 0.892 - -
95. cav3 ENSDARG00000024141 14906 2.524 - - - 0.706 0.838 - 0.980 - - caveolin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-426]
96. six1b ENSDARG00000026473 1908 2.521 - 0.842 - - - 0.776 0.903 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
97. fbp2 ENSDARG00000012366 1042 2.514 - 0.784 - - - 0.859 0.871 - - fructose-1,6-bisphosphatase 2 [Source:ZFIN;Acc:ZDB-GENE-040822-23]
98. rtn2a ENSDARG00000016088 12184 2.511 - - - 0.779 0.780 - 0.952 - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
99. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.501 - 0.861 - - - 0.835 0.805 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
100. MYOM1 MYOM1 3870 2.5 - 0.848 0.725 - - - 0.927 - -

There are 1616 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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