Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnnc1a

Gene Name Gene ID Reads Annotation
tnnc1a ENSDARG00000011400 165 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]










Genes with expression patterns similar to tnnc1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnnc1a ENSDARG00000011400 165 6 - - 1.000 1.000 1.000 1.000 - 1.000 1.000 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
2. tnni1b ENSDARG00000052708 478 5.502 - - 0.780 0.989 0.871 1.000 - 0.899 0.963 troponin I type 1b (skeletal, slow) [Source:ZFIN;Acc:ZDB-GENE-041212-37]
3. myl7 ENSDARG00000019096 1023 4.593 - - 0.840 0.972 0.869 - - 0.963 0.949 myosin, light chain 7, regulatory [Source:ZFIN;Acc:ZDB-GENE-991019-3]
4. tnnt2a ENSDARG00000020610 313 4.445 - - 0.729 0.917 0.882 - - 0.990 0.927 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
5. vmhc 234 4.398 - - 0.806 0.926 0.840 - - 0.942 0.884 ventricular myosin heavy chain
6. cmlc1 ENSDARG00000032976 455 3.722 - - 0.829 0.953 - - - 0.975 0.965 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
7. nppa ENSDARG00000052960 295 3.507 - - - 0.888 0.830 - - 0.875 0.914 natriuretic peptide A [Source:ZFIN;Acc:ZDB-GENE-030131-95]
8. hspb12 139 3.479 - - 0.734 0.990 0.877 - - - 0.878 heat shock protein, alpha-crystallin-related, b12
9. fhl2a ENSDARG00000042018 244 3.218 - - 0.713 0.870 0.881 - - - 0.754 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
10. csrp3 ENSDARG00000101706 21 2.792 - - - 0.970 - - - 0.947 0.875 cysteine and glycine-rich protein 3 (cardiac LIM protein) [Source:ZFIN;Acc:ZDB-GENE-041010-119]
11. lft2 ENSDARG00000044059 46 2.669 - - 0.924 0.979 - - - 0.766 - lefty2 [Source:ZFIN;Acc:ZDB-GENE-990630-11]
12. adprhl1 ENSDARG00000041589 34 2.518 - - - 0.737 0.903 - - 0.878 - ADP-ribosylhydrolase like 1 [Source:ZFIN;Acc:ZDB-GENE-041010-126]
13. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 2.49 - - - - 0.774 - - 0.930 0.786 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
14. stm ENSDARG00000035694 1567 2.457 - - - - - 1.000 - 0.722 0.735 starmaker [Source:ZFIN;Acc:ZDB-GENE-031112-4]
15. ryr2b ENSDARG00000003706 6 2.402 - - - - 0.789 - - 0.789 0.824 ryanodine receptor 2b (cardiac) [Source:ZFIN;Acc:ZDB-GENE-061226-3]
16. lmod2b ENSDARG00000045864 63 2.292 - - - 0.811 - - - 0.757 0.724 leiomodin 2 (cardiac) b [Source:ZFIN;Acc:ZDB-GENE-041210-356]
17. zgc:158432 ENSDARG00000067806, ENSDARG00000109239 4 1.839 - - - 0.839 - 1.000 - - - zgc:158432 [Source:ZFIN;Acc:ZDB-GENE-061201-57]
18. fgf10b ENSDARG00000100475 17 1.802 - - - - - 1.000 - - 0.802 fibroblast growth factor 10b [Source:ZFIN;Acc:ZDB-GENE-060828-1]
19. BX530066.1 BX530066.1 42 1.799 - - - 0.799 - 1.000 - - -
20. si:ch211-132b12.7 ENSDARG00000068374 30 1.779 - - - 0.779 - 1.000 - - - si:ch211-132b12.7 [Source:ZFIN;Acc:ZDB-GENE-050419-250]
21. mir148 75 1.763 - - - 0.884 - - - - 0.879 microRNA 148
22. si:ch211-260o22.1 si:ch211-260o22.1 34 1.737 - - - 0.806 - - - 0.931 -
23. CABZ01064671.1 ENSDARG00000039935 21 1.716 - - - - 0.798 - - 0.918 -
24. si:ch211-190k17.31 si:ch211-190k17.31 29 1.715 - - - 0.953 - 0.762 - - -
25. dbh ENSDARG00000069446, ENSDARG00000114942 60 1.652 - - - - - - - 0.819 0.833 dopamine beta-hydroxylase (dopamine beta-monooxygenase) [Source:ZFIN;Acc:ZDB-GENE-990621-3]
26. tm4sf4 ENSDARG00000040747 65 1.65 - - - - 0.769 0.881 - - - transmembrane 4 L six family member 4 [Source:ZFIN;Acc:ZDB-GENE-040801-231]
27. hand2 ENSDARG00000008305 1214 1.631 - - - - - - - 0.840 0.791 heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
28. lrrc10 ENSDARG00000045612 3 1.627 - - - 0.825 - - - - 0.802 leucine rich repeat containing 10 [Source:ZFIN;Acc:ZDB-GENE-071119-6]
29. BX323876.3 BX323876.3 19 1.605 - - - - - - - 0.726 0.879
30. spo11 ENSDARG00000013837 7 1.591 - - - - - - - 0.789 0.802 SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
31. si:dkey-54j5.1 si:dkey-54j5.1 4 1.591 - - - - - - - 0.789 0.802
32. tlx1 ENSDARG00000003965 67 1.577 - - - - - - - 0.761 0.816 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
33. foxf2a ENSDARG00000017195 345 1.556 - - - 0.725 - - - 0.831 - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
34. CU459094.1 ENSDARG00000110517 17 1.551 - - - - - 0.762 - 0.789 - uncharacterized LOC108191666 [Source:NCBI gene;Acc:108191666]
35. si:dkey-16p19.8 ENSDARG00000096481 6 1.549 - - - 0.760 - - - 0.789 - si:dkey-16p19.8 [Source:ZFIN;Acc:ZDB-GENE-120709-67]
36. fgf3 ENSDARG00000101540 75 1.53 - - - 0.734 - - - 0.796 - fibroblast growth factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-178]
37. FOXL2 239 1.509 - - - - - - - 0.760 0.749 forkhead box L2, transcript variant X1
38. acta2 ENSDARG00000045180 96 1.503 - - - - - - - 0.711 0.792 actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
39. foxg1d ENSDARG00000070053 32 1.468 - - - 0.701 0.767 - - - - forkhead box G1d [Source:ZFIN;Acc:ZDB-GENE-080305-12]
40. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1.466 - - 0.716 - 0.750 - - - -
41. ABI3BP 2 1 - - - - - 1.000 - - - ABI family member 3 binding protein, transcript variant X3
42. si:dkey-114b16.5 si:dkey-114b16.5 5 1 - - - - - 1.000 - - -
43. ANKRD27 ENSDARG00000089207 3 1 - - - - - 1.000 - - - ankyrin repeat domain 27 (VPS9 domain) [Source:ZFIN;Acc:ZDB-GENE-121105-1]
44. ccdc127a 39 1 - - - - - 1.000 - - - coiled-coil domain containing 127a, transcript variant X2
45. itgb1b ENSDARG00000104484 51 1 - - - - - 1.000 - - - integrin, beta 1b [Source:ZFIN;Acc:ZDB-GENE-030909-10]
46. p2rx1 ENSDARG00000016695, ENSDARG00000110431 9 1 - - - - - 1.000 - - - purinergic receptor P2X, ligand-gated ion channel, 1 [Source:ZFIN;Acc:ZDB-GENE-030319-1]
47. si:dkey-93l1.4 ENSDARG00000094927 0 1 - - - - - 1.000 - - - si:dkey-93l1.4 [Source:ZFIN;Acc:ZDB-GENE-090311-20]
48. MEX3D MEX3D 293 1 - - - - - 1.000 - - -
49. rc3h2 ENSDARG00000063050 7 1 - - - - - 1.000 - - - ring finger and CCCH-type domains 2 [Source:ZFIN;Acc:ZDB-GENE-060503-694]
50. BX323796.1 BX323796.1 2 1 - - - - - 1.000 - - -
51. tpbgl ENSDARG00000114338 5 1 - - - - - 1.000 - - - trophoblast glycoprotein-like [Source:ZFIN;Acc:ZDB-GENE-120209-2]
52. C6H1orf74 C6H1orf74 53 1 - - - - - 1.000 - - -
53. RP1 ENSDARG00000077687 6 1 - - - - - 1.000 - - - retinitis pigmentosa 1 (autosomal dominant) [Source:ZFIN;Acc:ZDB-GENE-070912-612]
54. irak3 ENSDARG00000053131 16 1 - - - - - 1.000 - - - interleukin-1 receptor-associated kinase 3 [Source:ZFIN;Acc:ZDB-GENE-060503-710]
55. CABZ01088134.1 ENSDARG00000033587 4 1 - - - - - 1.000 - - - enoyl-[acyl-carrier-protein] reductase, mitochondrial-like [Source:NCBI gene;Acc:101884755]
56. KBTBD3 ENSDARG00000060512 42 1 - - - - - 1.000 - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
57. si:dkey-88j15.4 ENSDARG00000079471 3 1 - - - - - 1.000 - - - si:dkey-88j15.4 [Source:ZFIN;Acc:ZDB-GENE-100922-55]
58. otx5 ENSDARG00000043483 282 1 - - - - - 1.000 - - - orthodenticle homolog 5 [Source:ZFIN;Acc:ZDB-GENE-030508-1]
59. impact ENSDARG00000043288 7 1 - - - - - 1.000 - - - impact RWD domain protein [Source:ZFIN;Acc:ZDB-GENE-040927-10]
60. si:dkeyp-34a4.1 si:dkeyp-34a4.1 0 1 - - - - - 1.000 - - -
61. si:ch211-224b1.4 si:ch211-224b1.4 29 1 - - - - - 1.000 - - -
62. si:dkey-220o21.5 si:dkey-220o21.5 24 1 - - - - - 1.000 - - -
63. CR848763.1 CR848763.1 9 1 - - - - - 1.000 - - -
64. zgc:153116 ENSDARG00000077205 7 1 - - - - - 1.000 - - - zgc:153116 [Source:ZFIN;Acc:ZDB-GENE-060825-107]
65. cacna1aa ENSDARG00000037905 4 1 - - - - - 1.000 - - - calcium channel, voltage-dependent, P/Q type, alpha 1A subunit, a [Source:ZFIN;Acc:ZDB-GENE-040724-26]
66. c1ql3a ENSDARG00000010350 179 1 - - - - - 1.000 - - - complement component 1, q subcomponent-like 3a [Source:ZFIN;Acc:ZDB-GENE-080417-1]
67. nedd9 ENSDARG00000089878, ENSDARG00000116312 41 1 - - - - - 1.000 - - - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
68. si:ch211-126g16.8 3 1 - - - - - 1.000 - - - si:ch211-126g16.8, transcript variant X1
69. zmynd10 ENSDARG00000002406, ENSDARG00000110880, ENSDARG00000114303 10 1 - - - - - 1.000 - - - zinc finger, MYND-type containing 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1218]
70. sytl5 ENSDARG00000062135 11 1 - - - - - 1.000 - - - synaptotagmin-like 5 [Source:ZFIN;Acc:ZDB-GENE-070912-424]
71. CU861664.1 CU861664.1 53 1 - - - - - 1.000 - - -
72. SNORA14 SNORA14 10 1 - - - - - 1.000 - - -
73. TRIM35_1 TRIM35_1 11 1 - - - - - 1.000 - - -
74. tagapa ENSDARG00000002353 20 1 - - - - - 1.000 - - - T cell activation RhoGTPase activating protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1877]
75. STPG2 ENSDARG00000061060 16 1 - - - - - 1.000 - - - sperm-tail PG-rich repeat containing 2 [Source:ZFIN;Acc:ZDB-GENE-061013-667]
76. si:ch211-278p9.1 ENSDARG00000087532 18 1 - - - - - 1.000 - - - si:ch211-278p9.1 [Source:ZFIN;Acc:ZDB-GENE-081028-46]
77. si:dkey-32n7.4 ENSDARG00000002956 3 1 - - - - - 1.000 - - - si:dkey-32n7.4 [Source:ZFIN;Acc:ZDB-GENE-110411-175]
78. si:dkey-117n7.2 ENSDARG00000093135 40 1 - - - - - 1.000 - - - si:dkey-117n7.2 [Source:ZFIN;Acc:ZDB-GENE-060503-49]
79. c6ast1 ENSDARG00000069216 8 1 - - - - - 1.000 - - - six-cysteine containing astacin protease 1 [Source:ZFIN;Acc:ZDB-GENE-070621-1]
80. APP APP 0 1 - - - - - 1.000 - - -
81. si:dkey-65b12.13 si:dkey-65b12.13 7 1 - - - - - 1.000 - - -
82. si:dkey-14o6.8 ENSDARG00000103239 3 1 - - - - - 1.000 - - - si:dkey-14o6.8 [Source:ZFIN;Acc:ZDB-GENE-110913-90]
83. si:dkey-2j6.2 si:dkey-2j6.2 5 1 - - - - - 1.000 - - -
84. epb41l3b ENSDARG00000019917 9 1 - - - - - 1.000 - - - erythrocyte membrane protein band 4.1-like 3b [Source:ZFIN;Acc:ZDB-GENE-021106-1]
85. si:ch211-114l13.12 ENSDARG00000088019 1 1 - - - - - 1.000 - - - si:ch211-114l13.12 [Source:ZFIN;Acc:ZDB-GENE-120215-211]
86. si:ch211-10p21.1 si:ch211-10p21.1 6 1 - - - - - 1.000 - - -
87. VOPP1 ENSDARG00000076373 12 1 - - - - - 1.000 - - - VOPP1, WBP1/VOPP1 family member [Source:ZFIN;Acc:ZDB-GENE-091204-64]
88. si:ch211-202c21.7 ENSDARG00000094126 2 1 - - - - - 1.000 - - - si:ch211-202c21.7 [Source:ZFIN;Acc:ZDB-GENE-081031-16]
89. si:ch211-254p10.3 si:ch211-254p10.3 5 1 - - - - - 1.000 - - -
90. zgc:123068 ENSDARG00000017489 15 1 - - - - - 1.000 - - - zgc:123068 [Source:ZFIN;Acc:ZDB-GENE-051030-98]
91. bmp1b ENSDARG00000028053 25 1 - - - - - 1.000 - - - bone morphogenetic protein 1b [Source:ZFIN;Acc:ZDB-GENE-060818-2]
92. cacna1f cacna1f 1 1 - - - - - 1.000 - - -
93. si:dkey-24i24.3 ENSDARG00000088452 27 1 - - - - - 1.000 - - - si:dkey-24i24.3 [Source:ZFIN;Acc:ZDB-GENE-110411-103]
94. SBSPON ENSDARG00000110160 2 1 - - - - - 1.000 - - - somatomedin B and thrombospondin type 1 domain containing [Source:HGNC Symbol;Acc:HGNC:30362]
95. ggcta ENSDARG00000076406 33 1 - - - - - 1.000 - - - gamma-glutamylcyclotransferase a [Source:ZFIN;Acc:ZDB-GENE-081104-129]
96. dnaaf3 ENSDARG00000092662 20 1 - - - - - 1.000 - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
97. wu:fb37b09 wu:fb37b09 10685 1 - - - - - 1.000 - - -
98. CABZ01079981.1 CABZ01079981.1 8 1 - - - - - 1.000 - - -
99. GARNL3 GARNL3 1 1 - - - - - 1.000 - - -
100. esr2b ENSDARG00000034181 20 1 - - - - - 1.000 - - - estrogen receptor 2b [Source:ZFIN;Acc:ZDB-GENE-030116-1]

There are 561 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA