Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnfrsfa

Gene Name Gene ID Reads Annotation
tnfrsfa ENSDARG00000004451 4 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]










Genes with expression patterns similar to tnfrsfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnfrsfa ENSDARG00000004451 4 4 - 1.000 - 1.000 1.000 - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
2. slc17a9a ENSDARG00000042954 36 2 - 1.000 - - 1.000 - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
3. si:ch211-191j22.8 ENSDARG00000057039 20 1.918 - - - - 1.000 - - - 0.918 si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
4. CU694952.2 CU694952.2 3 1.867 - - - - 1.000 - - - 0.867
5. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.742 - - - 0.828 - - - - 0.914 protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
6. BX323876.2 ENSDARG00000104577 62 1.729 - 0.987 - - - - - - 0.742
7. stx5al ENSDARG00000003175 21 1.441 - - - - 0.728 - - - 0.713 syntaxin 5A, like [Source:ZFIN;Acc:ZDB-GENE-030131-1825]
8. C8H20orf112 C8H20orf112 1 1 - - - - - - - - 1.000
9. vetz 12 1 - - - - - - - - 1.000 vezatin, adherens junctions transmembrane protein, transcript variant X2
10. oprd1b ENSDARG00000037159 21 1 - 1.000 - - - - - - - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
11. si:dkey-241l7.2 ENSDARG00000105335 6 1 - - - - - - - - 1.000 si:dkey-241l7.2 [Source:ZFIN;Acc:ZDB-GENE-041014-240]
12. zgc:195195 zgc:195195 6 1 - - - - 1.000 - - - -
13. si:ch211-222b21.3 si:ch211-222b21.3 2 1 - - - - - - - - 1.000
14. CR790368.1 ENSDARG00000100936 20 1 - 1.000 - - - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
15. mpg ENSDARG00000069729 43 1 - 1.000 - - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
16. ccdc136b_1 ENSDARG00000057921, ENSDARG00000075513 3 1 - 1.000 - - - - - - - coiled-coil domain containing 136b [Source:ZFIN;Acc:ZDB-GENE-081104-244]
17. SIGLEC15 SIGLEC15 10 1 - - - - - - - - 1.000
18. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - - - - - - - - 1.000
19. CABZ01073118.1 CABZ01073118.1 1 1 - - - - - - - - 1.000
20. tdrd6 ENSDARG00000070052 1 1 - - - - - - - - 1.000 tudor domain containing 6 [Source:ZFIN;Acc:ZDB-GENE-041001-210]
21. adamts13 ENSDARG00000076270 8 1 - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
22. CT025894.1 CT025894.1 0 1 - - - - - - - - 1.000
23. AL935186.2 ENSDARG00000097345 6 1 - 1.000 - - - - - - -
24. BX511182.1 BX511182.1 8 1 - - - - - - - - 1.000
25. PEG3_23 PEG3_23 4 1 - - - 1.000 - - - - -
26. ENSDARG00000088726 ENSDARG00000088726 0 1 - - - - - - - - 1.000
27. C14H11orf80 C14H11orf80 1 1 - - - - - - - - 1.000
28. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
29. si:ch73-6k14.2 ENSDARG00000096031 16 1 - - - 1.000 - - - - - si:ch73-6k14.2 [Source:ZFIN;Acc:ZDB-GENE-110914-243]
30. rgs1 ENSDARG00000089077 1 1 - - - - 1.000 - - - - regulator of G protein signaling 1 [Source:ZFIN;Acc:ZDB-GENE-070705-145]
31. CCDC180 ENSDARG00000032372 21 1 - 1.000 - - - - - - - coiled-coil domain containing 180 [Source:ZFIN;Acc:ZDB-GENE-130530-582]
32. FGFBP1 FGFBP1 7 1 - 1.000 - - - - - - -
33. vav3a ENSDARG00000086623 498 1 - 1.000 - - - - - - - vav 3 guanine nucleotide exchange factor a [Source:ZFIN;Acc:ZDB-GENE-091204-266]
34. ABCD2 ENSDARG00000059409 1 1 - - - - - - - - 1.000 ATP-binding cassette, sub-family D (ALD), member 2 [Source:ZFIN;Acc:ZDB-GENE-050517-28]
35. si:dkey-88l16.3 ENSDARG00000094055 0 1 - - - - - - - - 1.000 si:dkey-88l16.3 [Source:ZFIN;Acc:ZDB-GENE-030131-6015]
36. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000
37. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
38. si:dkey-233h12.3 si:dkey-233h12.3 4 1 - - - - - - - - 1.000
39. CABZ01073654.1 CABZ01073654.1 16 1 - - - 1.000 - - - - -
40. BX548047.2 ENSDARG00000115500 17 1 - - - 1.000 - - - - -
41. cabp2b ENSDARG00000052277 119 1 - 1.000 - - - - - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
42. ZNF70_1 ZNF70_1 3 1 - - - - 1.000 - - - -
43. si:ch73-389b16.2 ENSDARG00000103802 340 1 - 1.000 - - - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
44. cyp4f3 ENSDARG00000053530 10 1 - 1.000 - - - - - - - cytochrome P450, family 4, subfamily F, polypeptide 3 [Source:ZFIN;Acc:ZDB-GENE-070410-108]
45. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
46. si:dkey-9c18.1 si:dkey-9c18.1 3 1 - - - - - - - - 1.000
47. uts2b ENSDARG00000017340 0 1 - - - - - - - - 1.000 urotensin 2, beta [Source:ZFIN;Acc:ZDB-GENE-040630-10]
48. zgc:92658 8 1 - - - - - - - - 1.000 zgc:92658
49. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
50. BX927122.1 ENSDARG00000100571 0 1 - - - - - - - - 1.000
51. si:dkey-81i14.3 si:dkey-81i14.3 1 1 - - - - - - - - 1.000
52. CABZ01083442.1 ENSDARG00000105714 36 1 - - - - 1.000 - - - - si:cabz01083442.1 [Source:NCBI gene;Acc:101883419]
53. si:dkeyp-109b10.1 si:dkeyp-109b10.1 1 1 - - - - 1.000 - - - -
54. si:ch211-121a2.3 si:ch211-121a2.3 1 1 - - - - 1.000 - - - -
55. fbxl8 ENSDARG00000054222 3 1 - 1.000 - - - - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
56. si:dkey-265e15.2 ENSDARG00000089582, ENSDARG00000113391 1 1 - - - - - - - - 1.000 si:dkey-265e15.2 [Source:ZFIN;Acc:ZDB-GENE-081103-3]
57. chrm4a ENSDARG00000069254 32 1 - 1.000 - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
58. si:ch211-12e13.2 si:ch211-12e13.2 3 1 - - - - 1.000 - - - -
59. nadka ENSDARG00000006577, ENSDARG00000098313 5 1 - 1.000 - - - - - - - NAD kinase a [Source:ZFIN;Acc:ZDB-GENE-050417-39]
60. DPYD DPYD 52 1 - 1.000 - - - - - - -
61. C6H22orf23 C6H22orf23 15 1 - - - - - - - - 1.000
62. ENSDARG00000086339 ENSDARG00000086339 1 1 - - - - - - - - 1.000
63. zbtb32 ENSDARG00000073726 1 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
64. prkcg ENSDARG00000004561 1 1 - - - - 1.000 - - - - protein kinase C, gamma [Source:ZFIN;Acc:ZDB-GENE-090206-1]
65. si:dkey-88p24.10 si:dkey-88p24.10 6 1 - - - 1.000 - - - - -
66. ngfrb ENSDARG00000089223, ENSDARG00000115390 41 1 - 1.000 - - - - - - - nerve growth factor receptor b [Source:ZFIN;Acc:ZDB-GENE-070606-2]
67. si:dkey-31e10.5 ENSDARG00000070502 4 1 - - - - 1.000 - - - - si:dkey-31e10.5 [Source:ZFIN;Acc:ZDB-GENE-121214-76]
68. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
69. plp1b ENSDARG00000011929 8 1 - - - - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
70. CABZ01033130.1 CABZ01033130.1 5 1 - - - - - - - - 1.000
71. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - - - - - - - - 1.000
72. gcgb ENSDARG00000040907 182 1 - 1.000 - - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
73. ARID5B ENSDARG00000037196 165 1 - 1.000 - - - - - - - AT-rich interaction domain 5B [Source:ZFIN;Acc:ZDB-GENE-121214-272]
74. mif4gdb ENSDARG00000102578 31 1 - - - - - - - - 1.000 MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
75. zbtb14 ENSDARG00000098273 36 1 - 1.000 - - - - - - - zinc finger and BTB domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-040426-2946]
76. ca4a ENSDARG00000043589 1 1 - - - - - - - - 1.000 carbonic anhydrase IV a [Source:ZFIN;Acc:ZDB-GENE-080204-85]
77. oxgr1a.1 ENSDARG00000033684 24 1 - - - 1.000 - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
78. pxmp2 ENSDARG00000003144 50 1 - 1.000 - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
79. si:ch211-131e11.14 si:ch211-131e11.14 7 1 - - - - - - - - 1.000
80. LPL ENSDARG00000087697 18 1 - 1.000 - - - - - - - lipoprotein lipase [Source:ZFIN;Acc:ZDB-GENE-990415-139]
81. C11H19orf25_1 C11H19orf25_1 1 1 - - - - 1.000 - - - -
82. UBE2O 1 1 - - - - - - - - 1.000 ubiquitin-conjugating enzyme E2O
83. si:ch73-138e16.5 ENSDARG00000040141 8 1 - - - 1.000 - - - - - si:ch73-138e16.5 [Source:ZFIN;Acc:ZDB-GENE-070705-204]
84. si:ch211-263p13.7 ENSDARG00000077622 2 1 - - - 1.000 - - - - - si:ch211-263p13.7 [Source:ZFIN;Acc:ZDB-GENE-091204-336]
85. RBM33_1 RBM33_1 7 1 - 1.000 - - - - - - -
86. htr5al htr5al 6 1 - 1.000 - - - - - - -
87. nup85 ENSDARG00000098679 2 1 - 1.000 - - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
88. PRSS35 ENSDARG00000100691, ENSDARG00000109353 1 1 - - - - 1.000 - - - - protease, serine, 35 [Source:ZFIN;Acc:ZDB-GENE-040704-55]
89. dnase2 ENSDARG00000073893 141 1 - 1.000 - - - - - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
90. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - - - 1.000 - - - -
91. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
92. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
93. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
94. JAKMIP3 ENSDARG00000100708 56 1 - - - 1.000 - - - - - Janus kinase and microtubule interacting protein 3 [Source:ZFIN;Acc:ZDB-GENE-100914-6]
95. CNGA1 3 1 - - - 1.000 - - - - - cyclic nucleotide gated channel alpha 1
96. oca2 ENSDARG00000061303 22 1 - - - - 1.000 - - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
97. si:dkey-222o15.3 si:dkey-222o15.3 3 1 - - - - - - - - 1.000
98. TDRD12 ENSDARG00000075217 3 1 - - - 1.000 - - - - - tudor domain containing 12 [Source:ZFIN;Acc:ZDB-GENE-121214-348]
99. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - 1.000 - - - - - - -
100. si:ch211-197k17.3 ENSDARG00000096214 2 1 - - - - - - - - 1.000 si:ch211-197k17.3 [Source:ZFIN;Acc:ZDB-GENE-110914-193]

There are 585 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA