Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnfrsfa

Gene Name Gene ID Reads Annotation
tnfrsfa ENSDARG00000004451 4 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]










Genes with expression patterns similar to tnfrsfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnfrsfa ENSDARG00000004451 4 4 - 1.000 - 1.000 1.000 - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
2. slc17a9a ENSDARG00000042954 36 2 - 1.000 - - 1.000 - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
3. si:ch211-191j22.8 ENSDARG00000057039 20 1.918 - - - - 1.000 - - - 0.918 si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
4. CU694952.2 CU694952.2 3 1.867 - - - - 1.000 - - - 0.867
5. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.742 - - - 0.828 - - - - 0.914 protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
6. BX323876.2 ENSDARG00000104577 62 1.729 - 0.987 - - - - - - 0.742
7. stx5al ENSDARG00000003175 21 1.441 - - - - 0.728 - - - 0.713 syntaxin 5A, like [Source:ZFIN;Acc:ZDB-GENE-030131-1825]
8. cnga1 1 1 - - - 1.000 - - - - - cyclic nucleotide gated channel alpha 1
9. SP5 SP5 8 1 - - - - - - - - 1.000
10. kcnk15 ENSDARG00000077371 1 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
11. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - 1.000 - - - - - - -
12. ftr79 ENSDARG00000093972 1 1 - - - - - - - - 1.000 finTRIM family, member 79 [Source:ZFIN;Acc:ZDB-GENE-060126-4]
13. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
14. l3mbtl3 ENSDARG00000025983 12 1 - - - - - - - - 1.000 l(3)mbt-like 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040724-127]
15. si:ch211-197g22.1 si:ch211-197g22.1 1 1 - 1.000 - - - - - - -
16. si:dkey-199m13.1 si:dkey-199m13.1 3 1 - - - - - - - - 1.000
17. itln2 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 2 1 - - - 1.000 - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
18. CR790368.1 ENSDARG00000100936 20 1 - 1.000 - - - - - - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
19. si:ch211-224b1.4 si:ch211-224b1.4 29 1 - 1.000 - - - - - - -
20. coch ENSDARG00000024032 7 1 - 1.000 - - - - - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
21. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
22. CU571315.2 ENSDARG00000101956 15 1 - - - - - - - - 1.000
23. 5_8S_rRNA 5_8S_rRNA 24 1 - 1.000 - - - - - - -
24. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - 1.000 - - - - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
25. twf2b ENSDARG00000009727, ENSDARG00000112161 49 1 - 1.000 - - - - - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
26. si:ch211-262n1.5 12 1 - 1.000 - - - - - - - si:ch211-262n1.5
27. zp2.2 ENSDARG00000105346 23 1 - - - - - - - - 1.000 zona pellucida glycoprotein 2, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-010622-1]
28. prop1 ENSDARG00000039756, ENSDARG00000109950, ENSDARG00000114449 10 1 - - - - - - - - 1.000 PROP paired-like homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-081107-40]
29. si:dkey-45d16.4 72 1 - 1.000 - - - - - - - si:dkey-45d16.4
30. NUDT13 ENSDARG00000057417, ENSDARG00000115835 5 1 - - - - - - - - 1.000 nudix (nucleoside diphosphate linked moiety X)-type motif 13 [Source:ZFIN;Acc:ZDB-GENE-040724-60]
31. nup85 ENSDARG00000098679 2 1 - 1.000 - - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
32. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
33. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - 1.000 - - - - - - -
34. oca2 ENSDARG00000061303 22 1 - - - - 1.000 - - - - oculocutaneous albinism II [Source:ZFIN;Acc:ZDB-GENE-070718-4]
35. PEG3_10 PEG3_10 45 1 - 1.000 - - - - - - -
36. si:ch211-15o14.2 si:ch211-15o14.2 6 1 - - - - - - - - 1.000
37. si:dkeyp-109b10.1 si:dkeyp-109b10.1 1 1 - - - - 1.000 - - - -
38. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - 1.000 - - - - - - -
39. SNORD46 SNORD46 0 1 - - - - - - - - 1.000
40. ddit4 ENSDARG00000037618 37 1 - 1.000 - - - - - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
41. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
42. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
43. si:dkey-192l18.10 3 1 - - - - 1.000 - - - - si:dkey-192l18.10
44. CABZ01052953.1 CABZ01052953.1 146 1 - - - - 1.000 - - - -
45. cga ENSDARG00000040479 3 1 - - - - - - - - 1.000 glycoprotein hormones, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-040715-2]
46. BX682234.1 ENSDARG00000074732 5 1 - 1.000 - - - - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
47. sc:d136 sc:d136 2 1 - - - - 1.000 - - - -
48. zgc:195195 zgc:195195 6 1 - - - - 1.000 - - - -
49. RBM33_1 RBM33_1 7 1 - 1.000 - - - - - - -
50. CUL9 2 1 - - - 1.000 - - - - - cullin 9
51. CR388416.3 CR388416.3 1 1 - - - - - - - - 1.000
52. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
53. crygm5 ENSDARG00000041179, ENSDARG00000112467 1 1 - - - - 1.000 - - - - crystallin, gamma M5 [Source:ZFIN;Acc:ZDB-GENE-041024-6]
54. rps8b ENSDARG00000057368 68 1 - 1.000 - - - - - - - ribosomal protein S8b [Source:ZFIN;Acc:ZDB-GENE-050522-202]
55. AL935186.2 ENSDARG00000097345 6 1 - 1.000 - - - - - - -
56. si:dkey-61f9.2 2 1 - 1.000 - - - - - - - si:dkey-61f9.2
57. CABZ01081747.2 CABZ01081747.2 9 1 - 1.000 - - - - - - -
58. CABZ01068060.1 CABZ01068060.1 1 1 - - - - 1.000 - - - -
59. ca4a ENSDARG00000043589 1 1 - - - - - - - - 1.000 carbonic anhydrase IV a [Source:ZFIN;Acc:ZDB-GENE-080204-85]
60. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
61. uts2b ENSDARG00000017340 0 1 - - - - - - - - 1.000 urotensin 2, beta [Source:ZFIN;Acc:ZDB-GENE-040630-10]
62. ENSDARG00000088726 ENSDARG00000088726 0 1 - - - - - - - - 1.000
63. C8H20orf112 C8H20orf112 1 1 - - - - - - - - 1.000
64. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - - - - - - - 1.000
65. zgc:123060 4 1 - - - 1.000 - - - - - zgc:123060
66. CABZ01033130.1 CABZ01033130.1 5 1 - - - - - - - - 1.000
67. si:ch211-145c1.1 ENSDARG00000042063 2 1 - - - - 1.000 - - - - si:ch211-145c1.1 [Source:ZFIN;Acc:ZDB-GENE-070912-81]
68. si:dkey-47k16.4 ENSDARG00000113005 87 1 - 1.000 - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
69. BX005234.1 ENSDARG00000097761 3 1 - - - - - - - - 1.000
70. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
71. CABZ01044346.1 CABZ01044346.1 12 1 - 1.000 - - - - - - -
72. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
73. si:dkey-176f19.5 si:dkey-176f19.5 10 1 - - - - - - - - 1.000
74. guca1d ENSDARG00000044629, ENSDARG00000115722 22 1 - - - - - - - - 1.000 guanylate cyclase activator 1d [Source:ZFIN;Acc:ZDB-GENE-040724-231]
75. PLA2R1 ENSDARG00000077474 45 1 - 1.000 - - - - - - - phospholipase A2 receptor 1 [Source:ZFIN;Acc:ZDB-GENE-120323-1]
76. spry1 ENSDARG00000103985 0 1 - - - - - - - - 1.000 sprouty homolog 1, antagonist of FGF signaling (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-081215-2]
77. INTS5 ENSDARG00000077943 0 1 - - - - - - - - 1.000 integrator complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-090908-2]
78. mif4gdb ENSDARG00000102578 31 1 - - - - - - - - 1.000 MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
79. si:ch211-122l14.7 ENSDARG00000095576 5 1 - - - 1.000 - - - - - si:ch211-122l14.7 [Source:ZFIN;Acc:ZDB-GENE-041014-263]
80. pigf ENSDARG00000032780 7 1 - - - - - - - - 1.000 phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
81. CU694320.1 CU694320.1 6 1 - - - - - - - - 1.000
82. C14H11orf80 C14H11orf80 1 1 - - - - - - - - 1.000
83. PEG3_27 PEG3_27 10 1 - 1.000 - - - - - - -
84. CMA1_8 CMA1_8 10 1 - - - - - - - - 1.000
85. OLFM4 OLFM4 6 1 - 1.000 - - - - - - -
86. cdadc1 ENSDARG00000036650 16 1 - 1.000 - - - - - - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
87. dnase2 ENSDARG00000073893 141 1 - 1.000 - - - - - - - deoxyribonuclease II, lysosomal [Source:ZFIN;Acc:ZDB-GENE-010724-16]
88. CABZ01073118.1 CABZ01073118.1 1 1 - - - - - - - - 1.000
89. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
90. si:ch73-389b16.2 ENSDARG00000103802 340 1 - 1.000 - - - - - - - si:ch73-389b16.2 [Source:ZFIN;Acc:ZDB-GENE-050411-113]
91. FLNB ENSDARG00000092281 1 1 - - - - 1.000 - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
92. FGFBP1 FGFBP1 7 1 - 1.000 - - - - - - -
93. cabp2b ENSDARG00000052277 119 1 - 1.000 - - - - - - - calcium binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-081028-55]
94. cx52.9 ENSDARG00000086453 7 1 - 1.000 - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
95. si:ch211-263p13.7 ENSDARG00000077622 2 1 - - - 1.000 - - - - - si:ch211-263p13.7 [Source:ZFIN;Acc:ZDB-GENE-091204-336]
96. si:ch211-121a2.3 si:ch211-121a2.3 1 1 - - - - 1.000 - - - -
97. RPS11 ENSDARG00000053058 32 1 - - - - - - - - 1.000 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
98. grk1a ENSDARG00000058803 13 1 - 1.000 - - - - - - - G protein-coupled receptor kinase 1 a [Source:ZFIN;Acc:ZDB-GENE-050823-1]
99. gcgb ENSDARG00000040907 182 1 - 1.000 - - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
100. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000

There are 585 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA