Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnfrsfa

Gene Name Gene ID Reads Annotation
tnfrsfa ENSDARG00000004451 4 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]










Genes with expression patterns similar to tnfrsfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnfrsfa ENSDARG00000004451 4 4 - 1.000 - 1.000 1.000 - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
2. slc17a9a ENSDARG00000042954 36 2 - 1.000 - - 1.000 - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
3. si:ch211-191j22.8 ENSDARG00000057039 20 1.918 - - - - 1.000 - - - 0.918 si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
4. CU694952.2 CU694952.2 3 1.867 - - - - 1.000 - - - 0.867
5. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.742 - - - 0.828 - - - - 0.914 protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
6. BX323876.2 ENSDARG00000104577 62 1.729 - 0.987 - - - - - - 0.742
7. stx5al ENSDARG00000003175 21 1.441 - - - - 0.728 - - - 0.713 syntaxin 5A, like [Source:ZFIN;Acc:ZDB-GENE-030131-1825]
8. zgc:174260 ENSDARG00000091800, ENSDARG00000116307 10 1 - - - - 1.000 - - - - zgc:174260 [Source:ZFIN;Acc:ZDB-GENE-080213-9]
9. itln2 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 2 1 - - - 1.000 - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
10. si:ch211-169j7.3 si:ch211-169j7.3 4 1 - - - - - - - - 1.000
11. CABZ01063077.1 CABZ01063077.1 22 1 - - - - 1.000 - - - -
12. zgc:113343 ENSDARG00000103196 2 1 - - - - - - - - 1.000 zgc:113343 [Source:ZFIN;Acc:ZDB-GENE-050327-90]
13. CABZ01052953.1 CABZ01052953.1 146 1 - - - - 1.000 - - - -
14. NUGGC NUGGC 9 1 - - - - - - - - 1.000
15. ATG7 ENSDARG00000102893 1 1 - - - - - - - - 1.000 ATG7 autophagy related 7 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-1633]
16. si:dkey-47k16.4 ENSDARG00000113005 87 1 - 1.000 - - - - - - - si:dkey-47k16.4 [Source:ZFIN;Acc:ZDB-GENE-110914-131]
17. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
18. angptl2a ENSDARG00000024030 8 1 - 1.000 - - - - - - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
19. si:ch211-176g6.2 ENSDARG00000079791 4 1 - - - 1.000 - - - - - si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
20. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
21. nup85 ENSDARG00000098679 2 1 - 1.000 - - - - - - - nucleoporin 85 [Source:ZFIN;Acc:ZDB-GENE-040801-145]
22. si:ch211-132b12.1 ENSDARG00000061480 3 1 - - - 1.000 - - - - - si:ch211-132b12.1 [Source:ZFIN;Acc:ZDB-GENE-050420-315]
23. CMA1_8 CMA1_8 10 1 - - - - - - - - 1.000
24. si:dkey-20i20.11 ENSDARG00000101885 17 1 - 1.000 - - - - - - - si:dkey-20i20.11 [Source:ZFIN;Acc:ZDB-GENE-060503-58]
25. si:ch211-284e13.9 ENSDARG00000093214 2 1 - - - - - - - - 1.000 si:ch211-284e13.9 [Source:ZFIN;Acc:ZDB-GENE-060526-164]
26. OLFM4 OLFM4 6 1 - 1.000 - - - - - - -
27. CR388013.1 CR388013.1 3 1 - - - - - - - - 1.000
28. adamts13 ENSDARG00000076270 8 1 - - - - 1.000 - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 13 [Source:ZFIN;Acc:ZDB-GENE-070814-7]
29. CU694320.1 CU694320.1 6 1 - - - - - - - - 1.000
30. APOH APOH 2 1 - 1.000 - - - - - - -
31. AGAP3_1 AGAP3_1 18 1 - - - - 1.000 - - - -
32. si:ch73-138e16.5 ENSDARG00000040141 8 1 - - - 1.000 - - - - - si:ch73-138e16.5 [Source:ZFIN;Acc:ZDB-GENE-070705-204]
33. zbtb32 ENSDARG00000073726 1 1 - - - - - - - - 1.000 zinc finger and BTB domain containing 32 [Source:ZFIN;Acc:ZDB-GENE-131121-166]
34. FLNB ENSDARG00000092281 1 1 - - - - 1.000 - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
35. BX005234.1 ENSDARG00000097761 3 1 - - - - - - - - 1.000
36. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - 1.000 - - - - - - -
37. si:ch211-89f22.1 si:ch211-89f22.1 11 1 - - - - - - - - 1.000
38. 5S_rRNA_27 5S_rRNA_27 2 1 - - - - - - - - 1.000
39. si:ch211-145c1.1 ENSDARG00000042063 2 1 - - - - 1.000 - - - - si:ch211-145c1.1 [Source:ZFIN;Acc:ZDB-GENE-070912-81]
40. cnga1 1 1 - - - 1.000 - - - - - cyclic nucleotide gated channel alpha 1
41. si:ch211-113a14.17 15 1 - 1.000 - - - - - - - si:ch211-113a14.17
42. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
43. si:dkey-208a9.1 si:dkey-208a9.1 3 1 - 1.000 - - - - - - -
44. hel_dr4 hel_dr4 12 1 - - - - - - - - 1.000
45. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
46. si:dkey-88p24.10 si:dkey-88p24.10 6 1 - - - 1.000 - - - - -
47. fbxl8 ENSDARG00000054222 3 1 - 1.000 - - - - - - - F-box and leucine-rich repeat protein 8 [Source:ZFIN;Acc:ZDB-GENE-051120-81]
48. tmem232 ENSDARG00000067646 4 1 - 1.000 - - - - - - - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
49. gcgb ENSDARG00000040907 182 1 - 1.000 - - - - - - - glucagon b [Source:ZFIN;Acc:ZDB-GENE-040712-2]
50. si:ch211-220f16.1 ENSDARG00000093977 4 1 - - - - - - - - 1.000 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
51. BX004980.1 ENSDARG00000099680 10 1 - - - - - - - - 1.000
52. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
53. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - 1.000 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
54. ddit4 ENSDARG00000037618 37 1 - 1.000 - - - - - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
55. PEG3_27 PEG3_27 10 1 - 1.000 - - - - - - -
56. plp1b ENSDARG00000011929 8 1 - - - - - - - - 1.000 proteolipid protein 1b [Source:ZFIN;Acc:ZDB-GENE-030710-6]
57. ca4a ENSDARG00000043589 1 1 - - - - - - - - 1.000 carbonic anhydrase IV a [Source:ZFIN;Acc:ZDB-GENE-080204-85]
58. snpha ENSDARG00000078485 4 1 - - - 1.000 - - - - - syntaphilin a [Source:ZFIN;Acc:ZDB-GENE-081104-227]
59. ADTRP ADTRP 2 1 - - - 1.000 - - - - -
60. HTRA2 HTRA2 3 1 - - - 1.000 - - - - -
61. THAP9 THAP9 8 1 - - - - 1.000 - - - -
62. CU638740.4 CU638740.4 1 1 - - - - - - - - 1.000
63. CR352256.1 CR352256.1 3 1 - - - - - - - - 1.000
64. CABZ01044346.1 CABZ01044346.1 12 1 - 1.000 - - - - - - -
65. pigf ENSDARG00000032780 7 1 - - - - - - - - 1.000 phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
66. htr2a htr2a 1 1 - - - - - - - - 1.000
67. kif20a ENSDARG00000044491 12 1 - - - 1.000 - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
68. chrm4a ENSDARG00000069254 32 1 - 1.000 - - - - - - - cholinergic receptor, muscarinic 4a [Source:ZFIN;Acc:ZDB-GENE-090410-6]
69. SYDE1 ENSDARG00000077440 4 1 - - - - - - - - 1.000 synapse defective Rho GTPase homolog 1 [Source:HGNC Symbol;Acc:HGNC:25824]
70. ANKFN1 ENSDARG00000060941 1 1 - - - - 1.000 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]
71. kcnk15 ENSDARG00000077371 1 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
72. CRYGM4 ENSDARG00000008219 1 1 - - - - - - - - 1.000 crystallin, gamma M4 [Source:ZFIN;Acc:ZDB-GENE-120312-2]
73. C22H1orf53 C22H1orf53 24 1 - 1.000 - - - - - - -
74. si:ch211-226h8.6 ENSDARG00000077097 1 1 - - - - 1.000 - - - - si:ch211-226h8.6 [Source:ZFIN;Acc:ZDB-GENE-050208-456]
75. si:dkey-47k16.3 si:dkey-47k16.3 17 1 - - - - - - - - 1.000
76. si:dkey-77p23.2 si:dkey-77p23.2 22 1 - 1.000 - - - - - - -
77. zgc:123060 4 1 - - - 1.000 - - - - - zgc:123060
78. twf2b ENSDARG00000009727, ENSDARG00000112161 49 1 - 1.000 - - - - - - - twinfilin actin-binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-050522-238]
79. mpg ENSDARG00000069729 43 1 - 1.000 - - - - - - - N-methylpurine DNA glycosylase [Source:ZFIN;Acc:ZDB-GENE-070410-121]
80. SNORA62_1 SNORA62_1 1 1 - - - - - - - - 1.000
81. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
82. CU571315.2 ENSDARG00000101956 15 1 - - - - - - - - 1.000
83. BX324003.4 BX324003.4 24 1 - - - - - - - - 1.000
84. ldlrad4 ldlrad4 0 1 - - - - - - - - 1.000
85. FGFBP1 FGFBP1 7 1 - 1.000 - - - - - - -
86. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 - 1.000 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
87. si:dkey-211i20.3 si:dkey-211i20.3 1 1 - - - - - - - - 1.000
88. KBTBD3 ENSDARG00000060512 42 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
89. pxmp2 ENSDARG00000003144 50 1 - 1.000 - - - - - - - peroxisomal membrane protein 2 [Source:ZFIN;Acc:ZDB-GENE-040912-184]
90. si:ch211-227e10.2 ENSDARG00000100414 1 1 - - - - - - - - 1.000 si:ch211-227e10.2 [Source:ZFIN;Acc:ZDB-GENE-050419-8]
91. oprd1b ENSDARG00000037159 21 1 - 1.000 - - - - - - - opioid receptor, delta 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8473]
92. BX664622.3 BX664622.3 42 1 - 1.000 - - - - - - -
93. taar13d ENSDARG00000110650 0 1 - - - - - - - - 1.000 trace amine associated receptor 13d [Source:ZFIN;Acc:ZDB-GENE-041014-62]
94. CU468896.2 CU468896.2 38 1 - - - - 1.000 - - - -
95. SYNGAP1_1 SYNGAP1_1 66 1 - 1.000 - - - - - - -
96. U11 U11 11 1 - - - - - - - - 1.000
97. si:dkey-43f9.1_1 si:dkey-43f9.1_1 3 1 - - - - - - - - 1.000
98. CABZ01033130.1 CABZ01033130.1 5 1 - - - - - - - - 1.000
99. taar17a ENSDARG00000093785 1 1 - - - - 1.000 - - - - trace amine associated receptor 17a [Source:ZFIN;Acc:ZDB-GENE-060414-10]
100. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]

There are 585 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA