Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tnfrsfa

Gene Name Gene ID Reads Annotation
tnfrsfa ENSDARG00000004451 4 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]










Genes with expression patterns similar to tnfrsfa

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnfrsfa ENSDARG00000004451 4 4 - 1.000 - 1.000 1.000 - - - 1.000 tumor necrosis factor receptor superfamily, member a [Source:ZFIN;Acc:ZDB-GENE-010802-1]
2. slc17a9a ENSDARG00000042954 36 2 - 1.000 - - 1.000 - - - - solute carrier family 17 (vesicular nucleotide transporter), member 9a [Source:ZFIN;Acc:ZDB-GENE-081021-1]
3. si:ch211-191j22.8 ENSDARG00000057039 20 1.918 - - - - 1.000 - - - 0.918 si:ch211-191j22.8 [Source:ZFIN;Acc:ZDB-GENE-091204-10]
4. CU694952.2 CU694952.2 3 1.867 - - - - 1.000 - - - 0.867
5. prkg2 ENSDARG00000054741, ENSDARG00000116321 4 1.742 - - - 0.828 - - - - 0.914 protein kinase cGMP-dependent 2 [Source:ZFIN;Acc:ZDB-GENE-060531-80]
6. BX323876.2 ENSDARG00000104577 62 1.729 - 0.987 - - - - - - 0.742
7. stx5al ENSDARG00000003175 21 1.441 - - - - 0.728 - - - 0.713 syntaxin 5A, like [Source:ZFIN;Acc:ZDB-GENE-030131-1825]
8. taar17a ENSDARG00000093785 1 1 - - - - 1.000 - - - - trace amine associated receptor 17a [Source:ZFIN;Acc:ZDB-GENE-060414-10]
9. CABZ01063077.1 CABZ01063077.1 22 1 - - - - 1.000 - - - -
10. pigf ENSDARG00000032780 7 1 - - - - - - - - 1.000 phosphatidylinositol glycan anchor biosynthesis, class F [Source:ZFIN;Acc:ZDB-GENE-040426-1801]
11. ADTRP ADTRP 2 1 - - - 1.000 - - - - -
12. si:ch211-178j18.2 si:ch211-178j18.2 1 1 - - - - - - - - 1.000
13. si:ch73-119o17.1 si:ch73-119o17.1 6 1 - - - - - - - - 1.000
14. C22H1orf53 C22H1orf53 24 1 - 1.000 - - - - - - -
15. cx52.9 ENSDARG00000086453 7 1 - 1.000 - - - - - - - connexin 52.9 [Source:ZFIN;Acc:ZDB-GENE-040426-2421]
16. zgc:172051 ENSDARG00000086569 12 1 - - - - - - - - 1.000 zgc:172051 [Source:ZFIN;Acc:ZDB-GENE-080219-23]
17. BX324142.2 ENSDARG00000117006 1 1 - - - - - - - - 1.000
18. dnajb1b ENSDARG00000041394 25 1 - - - - - - - - 1.000 DnaJ (Hsp40) homolog, subfamily B, member 1b [Source:ZFIN;Acc:ZDB-GENE-030131-5455]
19. CABZ01044346.1 CABZ01044346.1 12 1 - 1.000 - - - - - - -
20. CABZ01068060.1 CABZ01068060.1 1 1 - - - - 1.000 - - - -
21. si:ch211-176g6.2 ENSDARG00000079791 4 1 - - - 1.000 - - - - - si:ch211-176g6.2 [Source:ZFIN;Acc:ZDB-GENE-121214-224]
22. itln2 ENSDARG00000036084, ENSDARG00000093796, ENSDARG00000115958 2 1 - - - 1.000 - - - - - intelectin 2 [Source:NCBI gene;Acc:100007792]
23. si:dkey-147f3.4 ENSDARG00000071029, ENSDARG00000092077 36 1 - 1.000 - - - - - - - si:dkey-147f3.4 [Source:ZFIN;Acc:ZDB-GENE-061009-29]
24. baxa_1 ENSDARG00000020623, ENSDARG00000089129 9 1 - 1.000 - - - - - - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
25. si:dkey-117p18.2 si:dkey-117p18.2 104 1 - - - - 1.000 - - - -
26. si:dkey-192l18.10 3 1 - - - - 1.000 - - - - si:dkey-192l18.10
27. CR936408.1 ENSDARG00000078938 15 1 - - - - - - - - 1.000 uncharacterized LOC799523 [Source:NCBI gene;Acc:799523]
28. desi1b ENSDARG00000089529, ENSDARG00000109374, ENSDARG00000111355 3 1 - 1.000 - - - - - - - desumoylating isopeptidase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-936]
29. SP5 SP5 8 1 - - - - - - - - 1.000
30. CABZ01033205.2 CABZ01033205.2 5 1 - - - - - - - - 1.000
31. CABZ01081747.2 CABZ01081747.2 9 1 - 1.000 - - - - - - -
32. zgc:174260 ENSDARG00000091800, ENSDARG00000116307 10 1 - - - - 1.000 - - - - zgc:174260 [Source:ZFIN;Acc:ZDB-GENE-080213-9]
33. CU694320.1 CU694320.1 6 1 - - - - - - - - 1.000
34. si:dkey-199m13.3 si:dkey-199m13.3 2 1 - 1.000 - - - - - - -
35. zgc:154055 ENSDARG00000103924 452 1 - - - - 1.000 - - - - zgc:154055 [Source:ZFIN;Acc:ZDB-GENE-060929-612]
36. sc:d136 sc:d136 2 1 - - - - 1.000 - - - -
37. PEG3_10 PEG3_10 45 1 - 1.000 - - - - - - -
38. SDR16C5 SDR16C5 34 1 - - - - - - - - 1.000
39. LPHN2_1 LPHN2_1 3 1 - - - - - - - - 1.000
40. kcnk15 ENSDARG00000077371 1 1 - - - - - - - - 1.000 potassium channel, subfamily K, member 15 [Source:ZFIN;Acc:ZDB-GENE-080220-30]
41. phkg1b ENSDARG00000069498 43 1 - - - - 1.000 - - - - phosphorylase kinase, gamma 1b (muscle) [Source:ZFIN;Acc:ZDB-GENE-050522-52]
42. asah2 ENSDARG00000012829 13 1 - - - - - - - - 1.000 N-acylsphingosine amidohydrolase 2 [Source:ZFIN;Acc:ZDB-GENE-041112-1]
43. si:ch211-196c10.13 ENSDARG00000096756 28 1 - - - - - - - - 1.000 si:ch211-196c10.13 [Source:ZFIN;Acc:ZDB-GENE-130603-71]
44. BX005234.1 ENSDARG00000097761 3 1 - - - - - - - - 1.000
45. si:dkey-11d20.4 si:dkey-11d20.4 6 1 - - - - 1.000 - - - -
46. si:ch211-214p13.4 si:ch211-214p13.4 1 1 - - - - 1.000 - - - -
47. dym ENSDARG00000042555 1 1 - 1.000 - - - - - - - dymeclin [Source:ZFIN;Acc:ZDB-GENE-091204-348]
48. CH25H ENSDARG00000045190 6 1 - - - 1.000 - - - - - cholesterol 25-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-041212-81]
49. THAP9 THAP9 8 1 - - - - 1.000 - - - -
50. U11 U11 11 1 - - - - - - - - 1.000
51. lhfpl4b ENSDARG00000076943 0 1 - - - - - - - - 1.000 LHFPL tetraspan subfamily member 4b [Source:ZFIN;Acc:ZDB-GENE-110216-4]
52. SLC47A1_2 SLC47A1_2 50 1 - 1.000 - - - - - - -
53. zgc:123060 4 1 - - - 1.000 - - - - - zgc:123060
54. OLFM4 OLFM4 6 1 - 1.000 - - - - - - -
55. si:ch211-220f16.1 ENSDARG00000093977 4 1 - - - - - - - - 1.000 si:ch211-220f16.1 [Source:ZFIN;Acc:ZDB-GENE-070912-198]
56. si:ch211-201o1.1 ENSDARG00000088689 1 1 - - - - - - - - 1.000 si:ch211-201o1.1 [Source:ZFIN;Acc:ZDB-GENE-120709-60]
57. angptl2a ENSDARG00000024030 8 1 - 1.000 - - - - - - - angiopoietin-like 2a [Source:ZFIN;Acc:ZDB-GENE-080721-15]
58. CKMT2 CKMT2 10 1 - 1.000 - - - - - - -
59. NLRP1 NLRP1 54 1 - 1.000 - - - - - - -
60. si:ch211-113a14.10 si:ch211-113a14.10 2 1 - - - - - - - - 1.000
61. si:dkey-45d16.4 72 1 - 1.000 - - - - - - - si:dkey-45d16.4
62. CU571315.2 ENSDARG00000101956 15 1 - - - - - - - - 1.000
63. si:ch211-224b1.4 si:ch211-224b1.4 29 1 - 1.000 - - - - - - -
64. COL18A1 COL18A1 0 1 - - - - - - - - 1.000
65. si:dkey-91i10.2 ENSDARG00000074034 334 1 - 1.000 - - - - - - - si:dkey-91i10.2 [Source:ZFIN;Acc:ZDB-GENE-050208-441]
66. slc7a1 ENSDARG00000016439, ENSDARG00000115084 32 1 - 1.000 - - - - - - - solute carrier family 7 (cationic amino acid transporter, y+ system), member 1 [Source:ZFIN;Acc:ZDB-GENE-091116-69]
67. slc39a4 ENSDARG00000059361 10 1 - - - - 1.000 - - - - solute carrier family 39 (zinc transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-060315-8]
68. si:ch211-113a14.17 15 1 - 1.000 - - - - - - - si:ch211-113a14.17
69. si:dkey-228l14.2 si:dkey-228l14.2 1 1 - 1.000 - - - - - - -
70. CR762486.1 CR762486.1 2 1 - 1.000 - - - - - - -
71. CUL9 2 1 - - - 1.000 - - - - - cullin 9
72. si:dkey-54f18.2 si:dkey-54f18.2 27 1 - 1.000 - - - - - - -
73. si:ch211-226h8.6 ENSDARG00000077097 1 1 - - - - 1.000 - - - - si:ch211-226h8.6 [Source:ZFIN;Acc:ZDB-GENE-050208-456]
74. si:ch211-262n1.5 12 1 - 1.000 - - - - - - - si:ch211-262n1.5
75. si:ch73-27e22.6 ENSDARG00000031731 12 1 - - - - 1.000 - - - - si:ch73-27e22.6 [Source:ZFIN;Acc:ZDB-GENE-070705-234]
76. si:ch211-255f4.4 si:ch211-255f4.4 0 1 - - - - - - - - 1.000
77. coch ENSDARG00000024032 7 1 - 1.000 - - - - - - - coagulation factor C homolog, cochlin (Limulus polyphemus) [Source:ZFIN;Acc:ZDB-GENE-030616-403]
78. KBTBD3 ENSDARG00000060512 42 1 - 1.000 - - - - - - - kelch repeat and BTB (POZ) domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-131016-5]
79. CMA1_8 CMA1_8 10 1 - - - - - - - - 1.000
80. FBLN7 ENSDARG00000089519 4 1 - - - 1.000 - - - - - fibulin 7 [Source:ZFIN;Acc:ZDB-GENE-170130-2]
81. kif20a ENSDARG00000044491 12 1 - - - 1.000 - - - - - kinesin family member 20A [Source:ZFIN;Acc:ZDB-GENE-050522-252]
82. INTS5 ENSDARG00000077943 0 1 - - - - - - - - 1.000 integrator complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-090908-2]
83. tmem232 ENSDARG00000067646 4 1 - 1.000 - - - - - - - transmembrane protein 232 [Source:ZFIN;Acc:ZDB-GENE-070705-434]
84. si:dkey-259p7.1 si:dkey-259p7.1 59 1 - 1.000 - - - - - - -
85. si:dkey-257e4.5 si:dkey-257e4.5 3 1 - 1.000 - - - - - - -
86. DYDC2 ENSDARG00000101848 2 1 - - - - - - - - 1.000 DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
87. si:ch211-105d18.7 si:ch211-105d18.7 6 1 - 1.000 - - - - - - -
88. RPS11 ENSDARG00000053058 32 1 - - - - - - - - 1.000 ribosomal protein S11 [Source:ZFIN;Acc:ZDB-GENE-040426-2701]
89. CLTCL1_2 CLTCL1_2 1 1 - - - - - - - - 1.000
90. SNORA53 SNORA53 10 1 - - - - - - - - 1.000
91. ddit4 ENSDARG00000037618 37 1 - 1.000 - - - - - - - DNA-damage-inducible transcript 4 [Source:ZFIN;Acc:ZDB-GENE-031002-35]
92. si:dkey-47k16.1 si:dkey-47k16.1 5 1 - - - - - - - - 1.000
93. 5_8S_rRNA 5_8S_rRNA 24 1 - 1.000 - - - - - - -
94. htr2a htr2a 1 1 - - - - - - - - 1.000
95. si:ch211-132b12.1 ENSDARG00000061480 3 1 - - - 1.000 - - - - - si:ch211-132b12.1 [Source:ZFIN;Acc:ZDB-GENE-050420-315]
96. BX682234.1 ENSDARG00000074732 5 1 - 1.000 - - - - - - - C-type lectin domain family 12 member B-like [Source:NCBI gene;Acc:101882781]
97. FLNB ENSDARG00000092281 1 1 - - - - 1.000 - - - - filamin B, beta (actin binding protein 278) [Source:ZFIN;Acc:ZDB-GENE-041026-1]
98. taf4b ENSDARG00000075732 3 1 - 1.000 - - - - - - - TAF4B RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-070424-105]
99. ENSDARG00000088328 ENSDARG00000088328 2 1 - - - - - - - - 1.000
100. ANKFN1 ENSDARG00000060941 1 1 - - - - 1.000 - - - - ankyrin repeat and fibronectin type III domain containing 1 [Source:HGNC Symbol;Acc:HGNC:26766]

There are 585 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA