Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tnfrsf1a

Gene Name Gene ID Reads Annotation
tnfrsf1a ENSDARG00000018569 842 tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]










Genes with expression patterns similar to tnfrsf1a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnfrsf1a ENSDARG00000018569 842 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tumor necrosis factor receptor superfamily, member 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2252]
2. ef1 1343 2.493 0.905 0.790 - - - - - 0.798 - E74-like factor 1 (ets domain transcription factor), transcript variant X4
3. EPS8L2 ENSDARG00000058108 484 2.462 0.944 0.764 - - - - 0.754 - - EPS8 like 2 [Source:ZFIN;Acc:ZDB-GENE-131121-340]
4. tom1 ENSDARG00000104581 1457 2.41 0.879 0.807 - 0.724 - - - - - target of myb1 membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-060721-1]
5. mat2al ENSDARG00000063665, ENSDARG00000109637, ENSDARG00000111463 447 2.315 0.876 - - - - 0.730 0.709 - - methionine adenosyltransferase II, alpha-like [Source:ZFIN;Acc:ZDB-GENE-060421-5255]
6. tmem51b ENSDARG00000061916 291 2.241 - 0.796 - 0.714 - 0.731 - - - transmembrane protein 51b [Source:ZFIN;Acc:ZDB-GENE-030131-5373]
7. plcd3a ENSDARG00000052957 467 1.756 0.904 0.852 - - - - - - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
8. junbb ENSDARG00000104773 2536 1.752 0.918 - - - - 0.834 - - - JunB proto-oncogene, AP-1 transcription factor subunit b [Source:ZFIN;Acc:ZDB-GENE-040426-2666]
9. rbl1 ENSDARG00000008141 1217 1.727 0.942 - - 0.785 - - - - - retinoblastoma-like 1 (p107) [Source:ZFIN;Acc:ZDB-GENE-030131-8179]
10. si:dkey-169i5.4 ENSDARG00000077862 511 1.718 0.935 - - - - - 0.783 - - si:dkey-169i5.4 [Source:ZFIN;Acc:ZDB-GENE-030131-8695]
11. swt1 ENSDARG00000094010 472 1.717 0.956 - - - - - 0.761 - - SWT1 RNA endoribonuclease homolog [Source:ZFIN;Acc:ZDB-GENE-041015-373]
12. cib1 ENSDARG00000103118 291 1.712 0.933 - - - - - 0.779 - - calcium and integrin binding 1 (calmyrin) [Source:ZFIN;Acc:ZDB-GENE-050417-170]
13. selk 954 1.69 0.917 0.773 - - - - - - - selenoprotein K
14. fam129ba ENSDARG00000062970 1578 1.684 0.933 - - - - - 0.751 - - family with sequence similarity 129, member Ba [Source:ZFIN;Acc:ZDB-GENE-070112-1222]
15. zgc:66475 ENSDARG00000099519 1348 1.68 0.917 0.763 - - - - - - - zgc:66475 [Source:ZFIN;Acc:ZDB-GENE-040426-1644]
16. RNF5 ENSDARG00000075606 1730 1.669 0.911 - - - - - 0.758 - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
17. ago4 ENSDARG00000100854 496 1.668 0.913 0.755 - - - - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
18. mob3a ENSDARG00000019113 2551 1.663 0.879 - - - - - 0.784 - - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
19. si:ch211-254c8.2 233 1.655 0.946 - - - - - - 0.709 - si:ch211-254c8.2, transcript variant X4
20. tjp3 ENSDARG00000002909 1978 1.629 0.888 - - - - - 0.741 - - tight junction protein 3 [Source:ZFIN;Acc:ZDB-GENE-030828-10]
21. map2k2a ENSDARG00000006609 856 1.619 0.906 - - 0.713 - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
22. LRP10 ENSDARG00000054539 1895 1.595 0.875 - - 0.720 - - - - - low density lipoprotein receptor-related protein 10 [Source:ZFIN;Acc:ZDB-GENE-140418-2]
23. ebp ENSDARG00000046098 502 1.594 - 0.809 - - - - - 0.785 - EBP, cholestenol delta-isomerase [Source:ZFIN;Acc:ZDB-GENE-040718-12]
24. tanc2 tanc2 804 1.592 - 0.781 - - - - 0.811 - -
25. atpv0e1 atpv0e1 1957 1.575 0.763 - - - - - 0.812 - -
26. SBNO2 SBNO2 773 1.573 - - - - - 0.706 0.867 - -
27. abca1a ENSDARG00000074635 1085 1.561 0.858 0.703 - - - - - - - ATP-binding cassette, sub-family A (ABC1), member 1A [Source:ZFIN;Acc:ZDB-GENE-031006-12]
28. phactr4a ENSDARG00000015552 1315 1.545 - 0.770 - - - - 0.775 - - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
29. serpine1 ENSDARG00000056795 593 1.543 0.773 - - - - - 0.770 - - serpin peptidase inhibitor, clade E (nexin, plasminogen activator inhibitor type 1), member 1 [Source:ZFIN;Acc:ZDB-GENE-070912-60]
30. zmat5 ENSDARG00000035434 983 1.543 - - - 0.711 - - 0.832 - - zinc finger, matrin-type 5 [Source:ZFIN;Acc:ZDB-GENE-040808-31]
31. TRPM4_1 TRPM4_1 273 1.526 - 0.706 - - - - 0.820 - -
32. scp2a ENSDARG00000012194 614 1.52 - 0.761 - - - 0.759 - - - sterol carrier protein 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1846]
33. capn12 ENSDARG00000010758, ENSDARG00000116381 3116 1.516 0.771 - - - - 0.745 - - - calpain 12 [Source:ZFIN;Acc:ZDB-GENE-050419-245]
34. CDC42EP1_1 CDC42EP1_1 449 1.503 - 0.721 - - - - 0.782 - -
35. anxa4 ENSDARG00000036456 3332 1.503 0.720 0.783 - - - - - - - annexin A4 [Source:ZFIN;Acc:ZDB-GENE-030707-1]
36. ubl3b ENSDARG00000021556 1210 1.486 - 0.782 - - - - - 0.704 - ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
37. SVIL SVIL 2589 1.486 0.780 - - - - - 0.706 - -
38. ets2 ENSDARG00000103980 451 1.483 - 0.772 - - - - 0.711 - - v-ets avian erythroblastosis virus E26 oncogene homolog 2 [Source:ZFIN;Acc:ZDB-GENE-050522-552]
39. si:ch211-11n16.2 ENSDARG00000099779 417 1.431 - - - - - 0.703 0.728 - - si:ch211-11n16.2 [Source:ZFIN;Acc:ZDB-GENE-041008-77]
40. igdcc4 ENSDARG00000076919 1303 1.43 - - - 0.722 - - - 0.708 - immunoglobulin superfamily, DCC subclass, member 4 [Source:ZFIN;Acc:ZDB-GENE-080327-32]
41. ARF5 ENSDARG00000070472, ENSDARG00000115687 6101 1.429 - - - - - 0.716 0.713 - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
42. fut9 fut9 519 1.416 - 0.702 - - - 0.714 - - -
43. OSBPL3 OSBPL3 145 1.414 - - - 0.701 - - 0.713 - -
44. rdh12l ENSDARG00000045277 139 1.404 - 0.703 - 0.701 - - - - - retinol dehydrogenase 12, like [Source:ZFIN;Acc:ZDB-GENE-040801-48]
45. FP102272.1 FP102272.1 9473 0.965 0.965 - - - - - - - -
46. si:dkey-238o13.4 ENSDARG00000078847 884 0.962 0.962 - - - - - - - - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
47. miox ENSDARG00000002764 588 0.958 0.958 - - - - - - - - myo-inositol oxygenase [Source:ZFIN;Acc:ZDB-GENE-050913-113]
48. chpf2 ENSDARG00000059961 679 0.957 0.957 - - - - - - - - chondroitin polymerizing factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7797]
49. siae ENSDARG00000040527, ENSDARG00000111850 186 0.956 0.956 - - - - - - - - sialic acid acetylesterase [Source:ZFIN;Acc:ZDB-GENE-040426-1032]
50. map2k1 ENSDARG00000007825 373 0.954 0.954 - - - - - - - - mitogen-activated protein kinase kinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2759]
51. fa2h ENSDARG00000090063 1084 0.952 0.952 - - - - - - - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
52. ssfa2 340 0.951 0.951 - - - - - - - - sperm specific antigen 2, transcript variant X2
53. DEDD ENSDARG00000029783 530 0.95 0.950 - - - - - - - - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
54. ACOT12 ENSDARG00000054534 61 0.95 0.950 - - - - - - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
55. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 0.949 0.949 - - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
56. bcl3 ENSDARG00000087832 69 0.949 0.949 - - - - - - - - B cell CLL/lymphoma 3 [Source:ZFIN;Acc:ZDB-GENE-061013-1]
57. sox4a ENSDARG00000004588, ENSDARG00000096389 2213 0.949 0.949 - - - - - - - - SRY (sex determining region Y)-box 4a [Source:ZFIN;Acc:ZDB-GENE-030131-8290]
58. chmp3 ENSDARG00000038064 577 0.948 0.948 - - - - - - - - charged multivesicular body protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2600]
59. gla ENSDARG00000036155, ENSDARG00000110713 228 0.948 0.948 - - - - - - - - galactosidase, alpha [Source:ZFIN;Acc:ZDB-GENE-041010-207]
60. trim25l ENSDARG00000020863 292 0.948 0.948 - - - - - - - - tripartite motif containing 25, like [Source:ZFIN;Acc:ZDB-GENE-040914-87]
61. ERO1LB ERO1LB 1433 0.948 0.948 - - - - - - - -
62. aup1 ENSDARG00000092609 2431 0.948 0.948 - - - - - - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
63. kif1b ENSDARG00000037020 2124 0.947 0.947 - - - - - - - - kinesin family member 1B [Source:ZFIN;Acc:ZDB-GENE-030820-1]
64. C2H7orf25 C2H7orf25 209 0.947 0.947 - - - - - - - -
65. vps11 ENSDARG00000036338 421 0.947 0.947 - - - - - - - - vacuolar protein sorting 11 [Source:ZFIN;Acc:ZDB-GENE-050731-5]
66. wdr35 ENSDARG00000069269 492 0.947 0.947 - - - - - - - - WD repeat domain 35 [Source:ZFIN;Acc:ZDB-GENE-060810-148]
67. cldnf ENSDARG00000043133 1006 0.947 0.947 - - - - - - - - claudin f [Source:ZFIN;Acc:ZDB-GENE-010328-6]
68. PTPDC1 PTPDC1 30 0.946 0.946 - - - - - - - -
69. si:ch211-270n8.3 87 0.946 0.946 - - - - - - - - si:ch211-270n8.3, transcript variant X2
70. si:dkeyp-99c4.4 si:dkeyp-99c4.4 31 0.946 0.946 - - - - - - - -
71. si:ch211-157l15.4 si:ch211-157l15.4 92 0.946 0.946 - - - - - - - -
72. ing5a ENSDARG00000022413 268 0.946 0.946 - - - - - - - - inhibitor of growth family, member 5a [Source:ZFIN;Acc:ZDB-GENE-031016-1]
73. zgc:111974 zgc:111974 1386 0.946 0.946 - - - - - - - -
74. psme1 ENSDARG00000002165, ENSDARG00000115834 72 0.946 0.946 - - - - - - - - proteasome activator subunit 1 [Source:ZFIN;Acc:ZDB-GENE-991110-17]
75. zgc:162946 zgc:162946 74 0.945 0.945 - - - - - - - -
76. fam155a ENSDARG00000075858 91 0.945 0.945 - - - - - - - - family with sequence similarity 155, member A [Source:ZFIN;Acc:ZDB-GENE-090313-34]
77. nfe2l1b ENSDARG00000076533, ENSDARG00000114820 1574 0.945 0.945 - - - - - - - - nuclear factor, erythroid 2-like 1b [Source:ZFIN;Acc:ZDB-GENE-120319-2]
78. ugt5b4 ENSDARG00000091916 130 0.945 0.945 - - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide B4 [Source:ZFIN;Acc:ZDB-GENE-070112-2332]
79. pycr1 pycr1 1258 0.944 0.944 - - - - - - - -
80. ptpn21 ENSDARG00000062248 2010 0.944 0.944 - - - - - - - - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
81. zgc:92313 ENSDARG00000040513 790 0.944 0.944 - - - - - - - - zgc:92313 [Source:ZFIN;Acc:ZDB-GENE-040718-339]
82. CARKD 1398 0.944 0.944 - - - - - - - - carbohydrate kinase domain containing, transcript variant X7
83. gdap1l1 ENSDARG00000028628 233 0.944 0.944 - - - - - - - - ganglioside induced differentiation associated protein 1-like 1 [Source:ZFIN;Acc:ZDB-GENE-080812-2]
84. cby1 ENSDARG00000077409, ENSDARG00000113018 772 0.942 0.942 - - - - - - - - chibby homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5074]
85. clic1 ENSDARG00000103340 2235 0.942 0.942 - - - - - - - - chloride intracellular channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3202]
86. arhgap19 ENSDARG00000083189 210 0.942 0.942 - - - - - - - - Rho GTPase activating protein 19 [Source:ZFIN;Acc:ZDB-GENE-100922-157]
87. osgn1 ENSDARG00000052279 5607 0.942 0.942 - - - - - - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
88. shdb ENSDARG00000062109, ENSDARG00000111006 323 0.942 0.942 - - - - - - - - Src homology 2 domain containing transforming protein D, b [Source:ZFIN;Acc:ZDB-GENE-030131-6059]
89. ZC3H12A_1 ZC3H12A_1 558 0.941 0.941 - - - - - - - -
90. si:ch1073-322p19.1 ENSDARG00000075173 204 0.941 0.941 - - - - - - - - si:ch1073-322p19.1 [Source:ZFIN;Acc:ZDB-GENE-091204-224]
91. arglu1b ENSDARG00000018319 1110 0.941 0.941 - - - - - - - - arginine and glutamate rich 1b [Source:ZFIN;Acc:ZDB-GENE-040426-736]
92. rnf11a ENSDARG00000010442 592 0.941 0.941 - - - - - - - - ring finger protein 11a [Source:ZFIN;Acc:ZDB-GENE-040426-1277]
93. actr5 ENSDARG00000098235 237 0.941 0.941 - - - - - - - - ARP5 actin related protein 5 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-2877]
94. rhogb ENSDARG00000004301 358 0.94 0.940 - - - - - - - - ras homolog family member Gb [Source:ZFIN;Acc:ZDB-GENE-030131-8877]
95. atp2a3 ENSDARG00000060978 1408 0.94 0.940 - - - - - - - - ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 3 [Source:ZFIN;Acc:ZDB-GENE-060531-103]
96. NAALAD2 ENSDARG00000021383 704 0.94 0.940 - - - - - - - - N-acetylated alpha-linked acidic dipeptidase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1025]
97. rhov ENSDARG00000070434 808 0.94 0.940 - - - - - - - - ras homolog family member V [Source:ZFIN;Acc:ZDB-GENE-031002-10]
98. ALPK1 195 0.939 0.939 - - - - - - - - alpha-kinase 1
99. rabl6 rabl6 489 0.939 0.939 - - - - - - - -
100. vapal ENSDARG00000115862 3108 0.939 0.939 - - - - - - - - VAMP (vesicle-associated membrane protein)-associated protein A, like [Source:ZFIN;Acc:ZDB-GENE-040718-281]

There are 1079 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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