Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tnfb

Gene Name Gene ID Reads Annotation
tnfb ENSDARG00000013598 94 tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]










Genes with expression patterns similar to tnfb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tnfb ENSDARG00000013598 94 8 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 1.000 tumor necrosis factor b (TNF superfamily, member 2) [Source:ZFIN;Acc:ZDB-GENE-050601-2]
2. si:busm1-180g5.7 si:busm1-180g5.7 15 1.773 - - - - - - 0.998 0.775 -
3. srpx2 ENSDARG00000034559 452 1.757 0.822 - - - - - 0.935 - - sushi-repeat containing protein X-linked 2 [Source:ZFIN;Acc:ZDB-GENE-110411-231]
4. BX927351.1 ENSDARG00000096844 125 1.749 0.825 - - - - - 0.924 - -
5. SLC38A9 ENSDARG00000032769 35 1.743 - - - 0.745 - - 0.998 - - solute carrier family 38, member 9 [Source:ZFIN;Acc:ZDB-GENE-061013-597]
6. ncbp2 ENSDARG00000014898 232 1.685 0.742 - - - - - 0.943 - - nuclear cap binding protein subunit 2 [Source:ZFIN;Acc:ZDB-GENE-020419-31]
7. si:ch211-87m7.2 ENSDARG00000030129 223 1.671 - 0.758 - - - - 0.913 - - si:ch211-87m7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-153]
8. dram2b ENSDARG00000044241 503 1.635 0.840 - - - - - 0.795 - - DNA-damage regulated autophagy modulator 2b [Source:ZFIN;Acc:ZDB-GENE-040625-141]
9. fbxo44 ENSDARG00000022623, ENSDARG00000114432 406 1.619 - 0.706 - - - - 0.913 - - F-box protein 44 [Source:ZFIN;Acc:ZDB-GENE-041212-85]
10. pex7 ENSDARG00000042553 409 1.616 - 0.728 - - - - 0.888 - - peroxisomal biogenesis factor 7 [Source:ZFIN;Acc:ZDB-GENE-050320-105]
11. zgc:174935 ENSDARG00000079255 532 1.554 0.790 - - - - - 0.764 - - zgc:174935 [Source:ZFIN;Acc:ZDB-GENE-080204-78]
12. zgc:64002 ENSDARG00000086998, ENSDARG00000113075, ENSDARG00000116103 170 1.534 - - - - - - 0.745 0.789 - zgc:64002 [Source:ZFIN;Acc:ZDB-GENE-040426-1329]
13. FKBP15_1 FKBP15_1 422 1.501 - 0.707 - - - - 0.794 - -
14. rac2 ENSDARG00000038010 5837 1.476 0.770 - - - - - 0.706 - - Rac family small GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-040625-27]
15. LRG1 LRG1 304 1.446 0.717 - - - - - 0.729 - -
16. gpatch2 1221 1.427 0.722 0.705 - - - - - - - G patch domain containing 2, transcript variant X1
17. ube2g2 ENSDARG00000025404 1774 1.424 0.708 - - - - - 0.716 - - ubiquitin-conjugating enzyme E2G 2 (UBC7 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-050417-288]
18. dopey2 1088 1.423 0.707 0.716 - - - - - - - dopey family member 2, transcript variant X2
19. fubp3 ENSDARG00000086896 21 1 - - - - - - 1.000 - - far upstream element (FUSE) binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-041121-12]
20. guca1c ENSDARG00000030758 9 0.998 - - - - - - 0.998 - - guanylate cyclase activator 1C [Source:ZFIN;Acc:ZDB-GENE-030829-1]
21. VWA5A_1 VWA5A_1 6 0.998 - - - - - - 0.998 - -
22. BICD2_1 BICD2_1 18 0.998 - - - - - - 0.998 - -
23. ttr ENSDARG00000037191 11 0.998 - - - - - - 0.998 - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
24. si:ch211-117l17.4 ENSDARG00000103534 24 0.998 - - - - - - 0.998 - - si:ch211-117l17.4 [Source:ZFIN;Acc:ZDB-GENE-110913-102]
25. zgc:136254 ENSDARG00000068465 27 0.998 - - - - - - 0.998 - - zgc:136254 [Source:ZFIN;Acc:ZDB-GENE-060421-3062]
26. trim62 ENSDARG00000060901 12 0.998 - - - - - - 0.998 - - tripartite motif containing 62 [Source:ZFIN;Acc:ZDB-GENE-070112-502]
27. LAMC2 ENSDARG00000068288 37 0.998 - - - - - - 0.998 - - laminin, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-110222-3]
28. ctgfb ENSDARG00000104292 69 0.998 - - - - - - 0.998 - - connective tissue growth factor b [Source:ZFIN;Acc:ZDB-GENE-070705-82]
29. MPPED1 ENSDARG00000088181 117 0.998 - - - - - - 0.998 - - metallophosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-111104-1]
30. si:dkey-177p2.15p si:dkey-177p2.15p 20 0.998 - - - - - - 0.998 - -
31. ENSDARG00000091446 ENSDARG00000091446 239 0.998 - - - - - - 0.998 - -
32. prkcba ENSDARG00000008723, ENSDARG00000116813 30 0.997 - - - - - - 0.997 - - protein kinase C, beta a [Source:ZFIN;Acc:ZDB-GENE-040426-1354]
33. si:ch211-284o19.8 ENSDARG00000053836 43 0.997 - - - - - - 0.997 - - si:ch211-284o19.8 [Source:ZFIN;Acc:ZDB-GENE-070912-289]
34. adck1 ENSDARG00000062561 22 0.997 - - - - - - 0.997 - - aarF domain containing kinase 1 [Source:ZFIN;Acc:ZDB-GENE-080401-5]
35. KBTBD13 ENSDARG00000076449 10 0.997 - - - - - - 0.997 - - kelch repeat and BTB (POZ) domain containing 13 [Source:ZFIN;Acc:ZDB-GENE-140106-122]
36. fpgt ENSDARG00000042139 155 0.996 - - - - - - 0.996 - - fucose-1-phosphate guanylyltransferase [Source:ZFIN;Acc:ZDB-GENE-050522-489]
37. pign ENSDARG00000077532 123 0.996 - - - - - - 0.996 - - phosphatidylinositol glycan anchor biosynthesis, class N [Source:ZFIN;Acc:ZDB-GENE-080204-114]
38. kcnh6 kcnh6 59 0.996 - - - - - - 0.996 - -
39. si:dkey-240h12.4 ENSDARG00000034210 114 0.995 - - - - - - 0.995 - - si:dkey-240h12.4 [Source:ZFIN;Acc:ZDB-GENE-070705-406]
40. CR790368.1 ENSDARG00000100936 20 0.995 - - - - - - 0.995 - - uncharacterized LOC110440102 [Source:NCBI gene;Acc:110440102]
41. si:dkey-16n15.3 223 0.995 - - - - - - 0.995 - - si:dkey-16n15.3
42. bmp3 ENSDARG00000060526, ENSDARG00000109238 54 0.995 - - - - - - 0.995 - - bone morphogenetic protein 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7192]
43. CU681846.1 CU681846.1 86 0.995 - - - - - - 0.995 - -
44. TRHDE_1 TRHDE_1 102 0.994 - - - - - - 0.994 - -
45. ccrl1a ccrl1a 40 0.994 - - - - - - 0.994 - -
46. lpar6b ENSDARG00000069441 65 0.994 - - - - - - 0.994 - - lysophosphatidic acid receptor 6b [Source:ZFIN;Acc:ZDB-GENE-110408-67]
47. si:ch211-135f11.1 166 0.994 - - - - - - 0.994 - - si:ch211-135f11.1, transcript variant X3
48. cdadc1 ENSDARG00000036650 16 0.994 - - - - - - 0.994 - - cytidine and dCMP deaminase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-163]
49. ca8 ENSDARG00000039098 401 0.993 - - - - - - 0.993 - - carbonic anhydrase VIII [Source:ZFIN;Acc:ZDB-GENE-050417-26]
50. si:ch211-113a14.12 ENSDARG00000077456 1004 0.993 - - - - - - 0.993 - - si:ch211-113a14.12 [Source:ZFIN;Acc:ZDB-GENE-121214-99]
51. U3 U3 287 0.992 - - - - - - 0.992 - -
52. otx2 766 0.992 - - - - - - 0.992 - - orthodenticle homeobox 2, transcript variant X2
53. dhrs13l1 ENSDARG00000098746 102 0.992 - - - - - - 0.992 - - dehydrogenase/reductase (SDR family) member 13 like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1907]
54. si:ch211-219f7.3 si:ch211-219f7.3 48 0.991 - - - - - - 0.991 - -
55. ogfrl2 ENSDARG00000024815, ENSDARG00000111132 74 0.99 - - - - - - 0.990 - - opioid growth factor receptor-like 2 [Source:ZFIN;Acc:ZDB-GENE-030616-523]
56. fntb ENSDARG00000027916 736 0.99 - - - - - - 0.990 - - farnesyltransferase, CAAX box, beta [Source:ZFIN;Acc:ZDB-GENE-030131-2220]
57. si:rp71-3c13.3 si:rp71-3c13.3 128 0.99 - - - - - - 0.990 - -
58. BX296557.2 BX296557.2 1083 0.989 - - - - - - 0.989 - -
59. TTBK1 TTBK1 120 0.989 - - - - - - 0.989 - -
60. CABZ01048373.1 CABZ01048373.1 81 0.989 - - - - - - 0.989 - -
61. spsb3a ENSDARG00000077737 527 0.989 - - - - - - 0.989 - - splA/ryanodine receptor domain and SOCS box containing 3a [Source:ZFIN;Acc:ZDB-GENE-030131-4182]
62. SUOX ENSDARG00000091574 122 0.988 - - - - - - 0.988 - - sulfite oxidase [Source:ZFIN;Acc:ZDB-GENE-070718-3]
63. GSG2 GSG2 1162 0.987 - - - - - - 0.987 - -
64. ulk4 ENSDARG00000004176 85 0.987 - - - - - - 0.987 - - unc-51 like kinase 4 [Source:ZFIN;Acc:ZDB-GENE-100922-243]
65. si:ch211-174j14.2 ENSDARG00000093015 111 0.987 - - - - - - 0.987 - - si:ch211-174j14.2 [Source:ZFIN;Acc:ZDB-GENE-050419-63]
66. ppcs ENSDARG00000061889 224 0.986 - - - - - - 0.986 - - phosphopantothenoylcysteine synthetase [Source:ZFIN;Acc:ZDB-GENE-060512-104]
67. si:dkeyp-86h10.3 ENSDARG00000095615 253 0.986 - - - - - - 0.986 - - si:dkeyp-86h10.3 [Source:ZFIN;Acc:ZDB-GENE-100922-65]
68. extl2 ENSDARG00000063191 118 0.986 - - - - - - 0.986 - - exostosin-like glycosyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-060929-1122]
69. tbc1d22a ENSDARG00000045510 363 0.985 - - - - - - 0.985 - - TBC1 domain family, member 22a [Source:ZFIN;Acc:ZDB-GENE-041114-144]
70. fam193b ENSDARG00000102831 442 0.983 - - - - - - 0.983 - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
71. SLC44A2 ENSDARG00000037059 88 0.983 - - - - - - 0.983 - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
72. tmprss13a ENSDARG00000100969 84 0.983 - - - - - - 0.983 - - transmembrane serine protease 13a [Source:ZFIN;Acc:ZDB-GENE-090309-3]
73. tnfaip6 ENSDARG00000093440, ENSDARG00000111060 91 0.979 - - - - - - 0.979 - - tumor necrosis factor, alpha-induced protein 6 [Source:ZFIN;Acc:ZDB-GENE-060421-2654]
74. fam83b ENSDARG00000078309 318 0.979 - - - - - - 0.979 - - family with sequence similarity 83, member B [Source:ZFIN;Acc:ZDB-GENE-030131-7066]
75. tlr7 ENSDARG00000068812, ENSDARG00000075685 30 0.979 - - - - - - 0.979 - - toll-like receptor 7 [Source:ZFIN;Acc:ZDB-GENE-040219-11]
76. zgc:165481 ENSDARG00000060092 95 0.978 - - - - - - 0.978 - - zgc:165481 [Source:ZFIN;Acc:ZDB-GENE-070615-21]
77. zgc:110434_1 30 0.977 - - - - - - 0.977 - - zgc:110434
78. si:dkey-56m15.4 si:dkey-56m15.4 39 0.975 - - - - - - 0.975 - -
79. si:ch211-259i2.2 si:ch211-259i2.2 45 0.975 - - - - - - 0.975 - -
80. plekhf1 ENSDARG00000102435, ENSDARG00000110694 314 0.975 - - - - - - 0.975 - - pleckstrin homology domain containing, family F (with FYVE domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1289]
81. rbm5 ENSDARG00000098280 396 0.973 - - - - - - 0.973 - - RNA binding motif protein 5 [Source:ZFIN;Acc:ZDB-GENE-030131-3022]
82. inadl 80 0.972 - - - - - - 0.972 - - InaD-like (Drosophila), transcript variant X4
83. BX088711.1 BX088711.1 125 0.971 - - - - - - 0.971 - -
84. IFI30 ENSDARG00000056378, ENSDARG00000112359 73 0.97 - - - - - - 0.970 - - interferon, gamma-inducible protein 30 [Source:ZFIN;Acc:ZDB-GENE-030131-8447]
85. FUZ ENSDARG00000079730 821 0.969 - - - - - - 0.969 - - fuzzy planar cell polarity protein [Source:ZFIN;Acc:ZDB-GENE-090609-2]
86. CABZ01044023.1 ENSDARG00000117734 240 0.968 - - - - - - 0.968 - -
87. nudt17 ENSDARG00000008014 479 0.967 - - - - - - 0.967 - - nudix (nucleoside diphosphate linked moiety X)-type motif 17 [Source:ZFIN;Acc:ZDB-GENE-050913-50]
88. pdpk1a ENSDARG00000062304 213 0.967 - - - - - - 0.967 - - 3-phosphoinositide dependent protein kinase 1a [Source:ZFIN;Acc:ZDB-GENE-061013-109]
89. CT030012.1 ENSDARG00000105611 154 0.967 - - - - - - 0.967 - -
90. mob1a_1 ENSDARG00000102320, ENSDARG00000111884, ENSDARG00000116249 91 0.967 - - - - - - 0.967 - - MOB kinase activator 1A [Source:ZFIN;Acc:ZDB-GENE-030131-6506]
91. esrrga ENSDARG00000004861 805 0.967 - - - - - - 0.967 - - estrogen-related receptor gamma a [Source:ZFIN;Acc:ZDB-GENE-030821-2]
92. CR855306.1 ENSDARG00000099475 102 0.966 - - - - - - 0.966 - -
93. CENPT CENPT 330 0.965 - - - - - - 0.965 - -
94. TARS2 76 0.965 - - - - - - 0.965 - - threonyl-tRNA synthetase 2, mitochondrial (putative), transcript variant X2
95. impdh1a ENSDARG00000042336, ENSDARG00000115253, ENSDARG00000116322 67 0.965 - - - - - - 0.965 - - IMP (inosine 5'-monophosphate) dehydrogenase 1a [Source:ZFIN;Acc:ZDB-GENE-040704-15]
96. stk16 ENSDARG00000037777 255 0.964 - - - - - - 0.964 - - serine/threonine kinase 16 [Source:ZFIN;Acc:ZDB-GENE-050417-102]
97. fastkd1 ENSDARG00000056128 141 0.963 - - - - - - 0.963 - - FAST kinase domains 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1833]
98. CABZ01059627.1 ENSDARG00000078394 101 0.962 - - - - - - 0.962 - -
99. eif4enif1 ENSDARG00000016177 238 0.962 - - - - - - 0.962 - - eukaryotic translation initiation factor 4E nuclear import factor 1 [Source:ZFIN;Acc:ZDB-GENE-050320-113]
100. rspo2 ENSDARG00000079570, ENSDARG00000113124 1688 0.962 - - - - - - 0.962 - - R-spondin 2 [Source:ZFIN;Acc:ZDB-GENE-060503-667]

There are 1003 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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