Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tmsb

Gene Name Gene ID Reads Annotation
tmsb ENSDARG00000054911 6411 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]










Genes with expression patterns similar to tmsb

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmsb ENSDARG00000054911 6411 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 thymosin, beta [Source:ZFIN;Acc:ZDB-GENE-050307-5]
2. wu:fb17g07 wu:fb17g07 10567 4.028 0.926 0.758 - - - 0.832 0.787 - 0.725
3. ywhag2 ENSDARG00000071658, ENSDARG00000116741 3326 3.526 0.869 0.785 - - - 0.937 0.935 - - 3-monooxygenase/tryptophan 5-monooxygenase activation protein, gamma polypeptide 2 [Source:ZFIN;Acc:ZDB-GENE-061023-2]
4. pebp1 ENSDARG00000042069 6651 3.365 0.839 0.805 - - - - 0.959 - 0.762 phosphatidylethanolamine binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2621]
5. hmgb3a ENSDARG00000056725 15668 3.364 0.769 - - - - 0.929 0.818 - 0.848 high mobility group box 3a [Source:ZFIN;Acc:ZDB-GENE-050428-1]
6. rgmd ENSDARG00000034013, ENSDARG00000111872 4752 3.259 0.792 0.706 - - - 0.841 0.920 - - RGM domain family, member D [Source:ZFIN;Acc:ZDB-GENE-030131-561]
7. tuba1c ENSDARG00000055216 8384 3.249 0.703 - - - - 0.868 0.818 - 0.860 tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
8. cd99l2 ENSDARG00000056722 5036 3.238 0.749 - - - - 0.907 0.857 - 0.725 CD99 molecule-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-1986]
9. hdgfrp2 7462 3.215 0.708 0.851 - - - 0.803 - - 0.853 hepatoma-derived growth factor-related protein 2, transcript variant X1
10. hnrnpub ENSDARG00000004735 16496 3.205 0.735 - - - - 0.828 0.862 - 0.780 heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
11. stmn1b ENSDARG00000033655 9491 3.2 0.708 - - - - 0.861 0.811 - 0.820 stathmin 1b [Source:ZFIN;Acc:ZDB-GENE-050417-397]
12. CABZ01072954.1 CABZ01072954.1 2330 3.191 0.723 0.738 - - - 0.896 0.834 - -
13. nrn1a ENSDARG00000071860 1311 3.171 0.760 - - - - 0.853 0.835 - 0.723 neuritin 1a [Source:ZFIN;Acc:ZDB-GENE-040718-212]
14. rap2ip rap2ip 681 3.164 0.723 - - - - 0.914 0.824 - 0.703
15. appb ENSDARG00000055543, ENSDARG00000109552 4461 3.163 - 0.751 - - - 0.890 0.804 - 0.718 amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
16. snrpd3l ENSDARG00000076283 7655 3.162 - - - - - 0.742 0.849 0.835 0.736 small nuclear ribonucleoprotein D3 polypeptide, like [Source:ZFIN;Acc:ZDB-GENE-030131-5219]
17. tmpob ENSDARG00000022978 8121 3.157 0.755 - - - - 0.812 0.787 - 0.803 thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
18. mllt11 ENSDARG00000071026 2518 3.124 0.717 - - - - 0.886 0.816 - 0.705 MLLT11, transcription factor 7 cofactor [Source:ZFIN;Acc:ZDB-GENE-030131-3007]
19. drg1 ENSDARG00000039345 7545 3.124 0.806 - - - - 0.801 0.787 - 0.730 developmentally regulated GTP binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8767]
20. ppp1r14c ENSDARG00000077341 1587 3.081 0.739 0.742 - - - 0.870 0.730 - - protein phosphatase 1, regulatory (inhibitor) subunit 14C [Source:ZFIN;Acc:ZDB-GENE-050706-92]
21. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 3.072 0.714 - - - - 0.826 0.772 - 0.760 cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
22. apex1 ENSDARG00000045843 6345 3.062 0.788 0.777 - - - 0.700 0.797 - - APEX nuclease (multifunctional DNA repair enzyme) 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2761]
23. add2 ENSDARG00000074581 1402 3.052 - 0.719 - - - 0.808 0.818 - 0.707 adducin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-080718-4]
24. rtca ENSDARG00000002215 3558 3.011 0.704 0.732 - - - 0.765 0.810 - - RNA 3'-terminal phosphate cyclase [Source:ZFIN;Acc:ZDB-GENE-030131-9687]
25. tuba2 ENSDARG00000045014 1490 3.007 0.736 - - - - 0.854 0.707 - 0.710 tubulin, alpha 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1970]
26. CR388002.1 CR388002.1 1998 2.613 0.826 0.857 - - - - 0.930 - -
27. cldn5a ENSDARG00000043716 3865 2.573 0.799 - - - - 0.891 0.883 - - claudin 5a [Source:ZFIN;Acc:ZDB-GENE-040426-2442]
28. tspan5a ENSDARG00000086033 1865 2.57 0.809 - - - - 0.906 0.855 - - tetraspanin 5a [Source:ZFIN;Acc:ZDB-GENE-041010-145]
29. ap1s2 ENSDARG00000058504, ENSDARG00000114515 6499 2.565 0.828 - - - - 0.905 0.832 - - adaptor related protein complex 1 subunit sigma 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5448]
30. slc1a3a ENSDARG00000104431 9888 2.561 0.811 - - - - 0.909 0.841 - - solute carrier family 1 (glial high affinity glutamate transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-030131-2159]
31. pcdh1gc5 ENSDARG00000104826 10052 2.551 0.774 - - - - 0.907 0.870 - - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
32. tmem47 ENSDARG00000057322 4691 2.551 0.771 - - - - 0.876 0.904 - - transmembrane protein 47 [Source:ZFIN;Acc:ZDB-GENE-040426-2644]
33. dpysl2b ENSDARG00000032083, ENSDARG00000109782 3487 2.551 - - - - - 0.869 0.875 - 0.807 dihydropyrimidinase-like 2b [Source:ZFIN;Acc:ZDB-GENE-031105-1]
34. snrnp70 ENSDARG00000077126 5921 2.529 - 0.873 - - - 0.821 - - 0.835 small nuclear ribonucleoprotein 70 (U1) [Source:ZFIN;Acc:ZDB-GENE-040825-2]
35. myt1b ENSDARG00000102879 5411 2.529 - - - - - 0.907 0.783 - 0.839 myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
36. si:dkey-25e11.10 si:dkey-25e11.10 955 2.501 0.740 - - - - 0.913 0.848 - -
37. nova2 ENSDARG00000017673 7685 2.5 - - - - - 0.850 0.844 - 0.806 neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
38. coe2 coe2 1633 2.498 - - - - - 0.843 0.943 - 0.712
39. nrarpb ENSDARG00000018958 6225 2.497 - - - - - 0.883 0.865 - 0.749 NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
40. plp1a ENSDARG00000103732 3544 2.492 - - - - - 0.898 0.822 - 0.772 proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
41. ADAM22 ENSDARG00000060532 2259 2.489 - - - - - 0.863 0.848 - 0.778 ADAM metallopeptidase domain 22 [Source:ZFIN;Acc:ZDB-GENE-070810-1]
42. ctbp1 ENSDARG00000057007, ENSDARG00000115804 5795 2.489 - - - - - 0.897 0.779 - 0.813 C-terminal binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-010130-1]
43. NAT16 ENSDARG00000086222 4682 2.487 0.839 - - - - 0.875 0.773 - - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
44. palm1a ENSDARG00000026882, ENSDARG00000115356 3425 2.48 0.831 0.794 - - - - 0.855 - - paralemmin 1a [Source:ZFIN;Acc:ZDB-GENE-050417-409]
45. txlnbb ENSDARG00000076241 6396 2.478 0.844 0.871 - - - - 0.763 - - taxilin beta b [Source:ZFIN;Acc:ZDB-GENE-070424-77]
46. mbd3b ENSDARG00000042029, ENSDARG00000061810 4561 2.475 - - - - - 0.933 0.753 - 0.789 methyl-CpG binding domain protein 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9792]
47. si:ch73-21g5.7 ENSDARG00000093156 9412 2.473 - - - - - 0.862 0.826 - 0.785 si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
48. abcf1 ENSDARG00000031795 8635 2.467 0.774 - - - - - 0.842 - 0.851 ATP-binding cassette, sub-family F (GCN20), member 1 [Source:ZFIN;Acc:ZDB-GENE-050517-31]
49. hoxb8b ENSDARG00000054025, ENSDARG00000111056 2106 2.464 - 0.754 - - - 0.912 0.798 - - homeobox B8b [Source:ZFIN;Acc:ZDB-GENE-980526-291]
50. tprg1l ENSDARG00000068149 1605 2.462 0.743 - - - - 0.883 0.836 - - tumor protein p63 regulated 1-like [Source:ZFIN;Acc:ZDB-GENE-070531-2]
51. hmp19 2554 2.461 - - - - - 0.878 0.861 - 0.722 HMP19 protein
52. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.46 - - - - - 0.840 0.791 - 0.829 myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
53. arnt2 ENSDARG00000103697 5731 2.459 - - - - - 0.817 0.832 - 0.810 aryl-hydrocarbon receptor nuclear translocator 2 [Source:ZFIN;Acc:ZDB-GENE-001207-3]
54. ptbp2b ENSDARG00000015901 2458 2.453 0.745 - - - - 0.852 0.856 - - polypyrimidine tract binding protein 2b [Source:ZFIN;Acc:ZDB-GENE-060810-49]
55. pbxip1a ENSDARG00000071015 4960 2.453 0.829 0.835 - - - - 0.789 - - pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
56. tmem35 ENSDARG00000052567 5685 2.449 - - - - - 0.766 0.925 - 0.758 transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
57. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.446 0.775 - - - - 0.749 0.922 - - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
58. slc6a9 ENSDARG00000018534 4089 2.444 0.878 0.725 - - - - 0.841 - - solute carrier family 6 (neurotransmitter transporter, glycine), member 9 [Source:ZFIN;Acc:ZDB-GENE-050105-3]
59. gap43 ENSDARG00000099744 4114 2.438 - - - - - 0.867 0.797 - 0.774 growth associated protein 43 [Source:ZFIN;Acc:ZDB-GENE-990415-87]
60. ebf3 ebf3 4238 2.438 0.711 - - - - - 0.897 - 0.830
61. gas1b ENSDARG00000067984 1748 2.437 - 0.764 - - - 0.759 0.914 - - growth arrest-specific 1b [Source:ZFIN;Acc:ZDB-GENE-050302-79]
62. chrna1 ENSDARG00000009021 2931 2.434 0.780 0.862 - - - - 0.792 - - cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
63. AKT3 AKT3 1729 2.428 - - - - - 0.868 0.827 - 0.733
64. her4.2_1 ENSDARG00000056729, ENSDARG00000094426 2383 2.428 - - - - - 0.847 0.820 - 0.761 hairy-related 4, tandem duplicate 2 [Source:ZFIN;Acc:ZDB-GENE-060815-1]
65. vdac1 ENSDARG00000045132 8051 2.426 0.760 - - - - 0.856 - - 0.810 voltage-dependent anion channel 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6514]
66. map7d2a ENSDARG00000068480 513 2.425 0.722 - - - - 0.855 0.848 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
67. her4.1 ENSDARG00000056732 1264 2.425 - - - - - 0.850 0.772 - 0.803 hairy-related 4, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-980526-521]
68. PTP4A3 ENSDARG00000039997 3814 2.424 0.767 0.841 - - - - 0.816 - - protein tyrosine phosphatase type IVA, member 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2220]
69. itm2cb ENSDARG00000039650 716 2.421 0.778 - - - - 0.893 0.750 - - integral membrane protein 2Cb [Source:ZFIN;Acc:ZDB-GENE-030131-7806]
70. sypa ENSDARG00000042974, ENSDARG00000110528 3217 2.419 0.730 - - - - 0.889 0.800 - - synaptophysin a [Source:ZFIN;Acc:ZDB-GENE-031104-2]
71. CYTH2 ENSDARG00000028800 2349 2.416 - - - - - 0.887 0.810 - 0.719 cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
72. lfng ENSDARG00000037879 11783 2.416 0.735 - - - - 0.852 - - 0.829 LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
73. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.412 0.771 0.837 - - - - 0.804 - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
74. dpysl3 ENSDARG00000002587 4381 2.411 - - - - - 0.790 0.829 - 0.792 dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
75. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 2.408 - - - - - 0.889 0.757 - 0.762 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
76. eya1 ENSDARG00000014259, ENSDARG00000116267 5111 2.408 0.866 0.821 - - - - 0.721 - - EYA transcriptional coactivator and phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-990712-18]
77. prmt1 ENSDARG00000010246 11311 2.404 0.817 0.875 - - - 0.712 - - - protein arginine methyltransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-693]
78. epha4b ENSDARG00000011600 3110 2.404 0.746 - - - - 0.787 0.871 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
79. six1b ENSDARG00000026473 1908 2.401 0.855 0.803 - - - - 0.743 - - SIX homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2308]
80. sulf1 ENSDARG00000038428 2748 2.401 0.825 0.808 - - - - 0.768 - - sulfatase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9242]
81. tcf7l1b ENSDARG00000007369 2785 2.4 - 0.804 - - - 0.887 0.709 - - transcription factor 7 like 1b [Source:ZFIN;Acc:ZDB-GENE-991110-10]
82. nudt3a ENSDARG00000016256 2713 2.398 0.731 0.876 - - - - 0.791 - - nudix (nucleoside diphosphate linked moiety X)-type motif 3a [Source:ZFIN;Acc:ZDB-GENE-040426-792]
83. arvcfb ENSDARG00000061688 2388 2.396 0.728 0.796 - - - - 0.872 - - ARVCF, delta catenin family member b [Source:ZFIN;Acc:ZDB-GENE-060526-60]
84. CBFA2T3 ENSDARG00000079012 6799 2.395 - 0.810 - - - 0.705 0.880 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
85. msi1 ENSDARG00000010710 2634 2.393 - - - - - 0.820 0.798 - 0.775 musashi RNA-binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-050320-86]
86. camk2d2 ENSDARG00000014273 2840 2.392 0.780 - - - - 0.816 0.796 - - calcium/calmodulin-dependent protein kinase (CaM kinase) II delta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-277]
87. wasf3 wasf3 3287 2.391 0.761 - - - - 0.833 0.797 - -
88. fitm1 ENSDARG00000056464 1759 2.39 0.816 0.865 - - - - 0.709 - - fat storage-inducing transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-050306-28]
89. gnao1a ENSDARG00000016676 8184 2.388 0.704 - - - - - 0.808 - 0.876 guanine nucleotide binding protein (G protein), alpha activating activity polypeptide O, a [Source:ZFIN;Acc:ZDB-GENE-040426-1757]
90. CABZ01111990.1 CABZ01111990.1 4374 2.388 0.733 - - - - - 0.835 - 0.820
91. ank2b ENSDARG00000043313 3065 2.384 0.728 - - - - - 0.896 - 0.760 ankyrin 2b, neuronal [Source:ZFIN;Acc:ZDB-GENE-041010-165]
92. gipc1 ENSDARG00000104483 2913 2.382 - 0.754 - - - 0.927 0.701 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
93. BX294434.1 ENSDARG00000061272 6493 2.376 0.844 0.790 - - - - 0.742 - - solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
94. dpysl5a ENSDARG00000011141 1827 2.373 - - - - - 0.861 0.781 - 0.731 dihydropyrimidinase-like 5a [Source:ZFIN;Acc:ZDB-GENE-030131-3136]
95. nrarpa ENSDARG00000091419, ENSDARG00000111485 7867 2.372 0.769 - - - - 0.797 - - 0.806 NOTCH regulated ankyrin repeat protein a [Source:ZFIN;Acc:ZDB-GENE-030515-6]
96. zic4 ENSDARG00000031307 1228 2.371 0.721 - - - - 0.853 0.797 - - zic family member 4 [Source:ZFIN;Acc:ZDB-GENE-040622-4]
97. Sep-03 Sep-03 1124 2.367 - - - - - 0.813 0.825 - 0.729
98. si:ch211-11c15.3 si:ch211-11c15.3 1279 2.366 - - - - - 0.883 0.750 - 0.733
99. sh3glb2b ENSDARG00000035470, ENSDARG00000109833 719 2.365 0.744 - - - - 0.734 0.887 - - SH3-domain GRB2-like endophilin B2b [Source:ZFIN;Acc:ZDB-GENE-040426-833]
100. cadm3 ENSDARG00000057013 1545 2.357 - - - - - 0.882 0.755 - 0.720 cell adhesion molecule 3 [Source:ZFIN;Acc:ZDB-GENE-060512-196]

There are 3008 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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