Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmod4

Gene Name Gene ID Reads Annotation
tmod4 ENSDARG00000020890 17436 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]










Genes with expression patterns similar to tmod4

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmod4 ENSDARG00000020890 17436 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
2. myoz1b ENSDARG00000071445 13381 4.346 - - 0.847 0.864 0.783 0.936 - - 0.916 myozenin 1b [Source:ZFIN;Acc:ZDB-GENE-040718-146]
3. ckmb ENSDARG00000040565 505935 4.034 - - 0.891 0.884 0.773 0.746 - - 0.740 creatine kinase, muscle b [Source:ZFIN;Acc:ZDB-GENE-040426-2128]
4. pbxip1a ENSDARG00000071015 4960 3.754 - - 0.746 0.720 0.754 0.761 - - 0.773 pre-B-cell leukemia homeobox interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-060503-871]
5. jph1b ENSDARG00000038826 7416 3.724 0.706 - 0.763 0.783 0.747 0.725 - - - junctophilin 1b [Source:ZFIN;Acc:ZDB-GENE-060616-389]
6. tnnt3a ENSDARG00000030270 112506 3.575 - - 0.854 0.869 0.901 - - - 0.951 troponin T type 3a (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-000322-3]
7. si:ch211-226o13.2 84923 3.48 - - 0.897 0.901 0.732 - - - 0.950 si:ch211-226o13.2
8. ttna ttna 101197 3.471 - - 0.856 - 0.818 0.910 - - 0.887
9. atp2a1 ENSDARG00000020574 291561 3.441 - - 0.890 0.845 0.849 - - - 0.857 ATPase sarcoplasmic/endoplasmic reticulum Ca2+ transporting 1 [Source:ZFIN;Acc:ZDB-GENE-020905-1]
10. desma ENSDARG00000058656 30292 3.425 - - 0.813 0.862 0.767 - 0.983 - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
11. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 3.402 - - 0.870 - 0.766 0.849 - - 0.917 RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
12. neb ENSDARG00000032630, ENSDARG00000109273 19493 3.376 - - 0.809 0.892 0.777 - - - 0.898 nebulin [Source:ZFIN;Acc:ZDB-GENE-041111-216]
13. mylz3 ENSDARG00000017441 303597 3.37 - - 0.860 0.853 0.801 - - - 0.856 myosin, light polypeptide 3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-6]
14. vcl vcl 6667 3.369 - - 0.883 0.717 - - 0.962 - 0.807
15. ttnb ttnb 73721 3.346 - - 0.830 0.901 0.820 - - - 0.795
16. suclg1 ENSDARG00000052712 17570 3.341 0.851 - - - 0.809 0.766 - - 0.915 succinate-CoA ligase, alpha subunit [Source:ZFIN;Acc:ZDB-GENE-040912-101]
17. tpma ENSDARG00000033683 752432 3.316 - - 0.896 0.889 0.781 - - - 0.750 alpha-tropomyosin [Source:ZFIN;Acc:ZDB-GENE-990415-269]
18. ckma ENSDARG00000035327, ENSDARG00000114671 418792 3.263 - - 0.866 0.826 0.715 - - - 0.856 creatine kinase, muscle a [Source:ZFIN;Acc:ZDB-GENE-980526-109]
19. SYNPO2 SYNPO2 7382 3.262 - - 0.862 0.775 0.764 - - - 0.861
20. tnni1al 8272 3.237 - 0.967 0.742 0.761 - - - - 0.767 troponin I, skeletal, slow like, transcript variant X1
21. gapdh ENSDARG00000043457 68684 3.234 - - 0.818 0.903 0.769 - - 0.744 - glyceraldehyde-3-phosphate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030115-1]
22. klhl31 ENSDARG00000039066 13656 3.174 - - 0.838 0.721 0.719 - - - 0.896 kelch-like family member 31 [Source:ZFIN;Acc:ZDB-GENE-030131-2052]
23. prx ENSDARG00000017246 6183 3.157 - - 0.790 0.828 0.714 - - - 0.825 periaxin [Source:ZFIN;Acc:ZDB-GENE-030131-5790]
24. tnnt2d ENSDARG00000002988 7590 3.152 - - 0.723 0.773 - - - 0.760 0.896 troponin T2d, cardiac [Source:ZFIN;Acc:ZDB-GENE-050626-97]
25. mylpfb ENSDARG00000002589 70167 3.149 0.702 - 0.851 0.876 0.720 - - - - myosin light chain, phosphorylatable, fast skeletal muscle b [Source:ZFIN;Acc:ZDB-GENE-040912-115]
26. ank1 ank1 5209 3.147 - - 0.822 0.724 - - - 0.714 0.887
27. tnni2a.4 ENSDARG00000029069 122344 3.146 - - 0.809 0.766 0.769 - - - 0.802 troponin I type 2a (skeletal, fast), tandem duplicate 4 [Source:ZFIN;Acc:ZDB-GENE-040625-119]
28. SPEG SPEG 4017 3.089 - - 0.744 0.813 0.741 - - - 0.791
29. si:ch211-156j16.1 ENSDARG00000092035 7441 3.063 - - 0.725 0.782 0.754 - - - 0.802 si:ch211-156j16.1 [Source:ZFIN;Acc:ZDB-GENE-030131-4106]
30. zgc:158296 ENSDARG00000070923 3935 3.047 - - 0.763 0.771 0.713 - - - 0.800 zgc:158296 [Source:ZFIN;Acc:ZDB-GENE-070112-1272]
31. ca2 ENSDARG00000014488 10141 3.014 - - 0.845 0.723 0.740 - - - 0.706 carbonic anhydrase II [Source:ZFIN;Acc:ZDB-GENE-031219-5]
32. mat1a ENSDARG00000039605, ENSDARG00000115975 15561 3.002 - - - 0.782 0.799 - 0.717 - 0.704 methionine adenosyltransferase I, alpha [Source:ZFIN;Acc:ZDB-GENE-030131-6127]
33. txlnba ENSDARG00000020594 9385 2.985 0.733 - 0.778 0.714 - - - - 0.760 taxilin beta a [Source:ZFIN;Acc:ZDB-GENE-030131-322]
34. SYNPO2L SYNPO2L 6697 2.577 - - 0.840 0.804 - - - - 0.933
35. hhatla ENSDARG00000039051 6598 2.57 - - 0.838 0.814 - - - - 0.918 hedgehog acyltransferase like, a [Source:ZFIN;Acc:ZDB-GENE-040426-1865]
36. myl1 ENSDARG00000014196 98943 2.521 - - 0.909 0.762 0.850 - - - - myosin, light chain 1, alkali; skeletal, fast [Source:ZFIN;Acc:ZDB-GENE-030131-8109]
37. tmem38a ENSDARG00000024047 41883 2.516 - - 0.874 0.785 0.857 - - - - transmembrane protein 38A [Source:ZFIN;Acc:ZDB-GENE-040426-1888]
38. si:ch73-367p23.2 ENSDARG00000096257, ENSDARG00000112155 27188 2.512 - - 0.740 0.848 - - - - 0.924 si:ch73-367p23.2 [Source:ZFIN;Acc:ZDB-GENE-120215-61]
39. mybpc2b ENSDARG00000021265 9618 2.51 - - 0.810 0.844 - - - - 0.856 myosin binding protein C, fast type b [Source:ZFIN;Acc:ZDB-GENE-050320-80]
40. srl ENSDARG00000104587 11126 2.496 - - 0.848 0.877 0.771 - - - - sarcalumenin [Source:ZFIN;Acc:ZDB-GENE-061110-91]
41. CR847973.1 ENSDARG00000115516 8754 2.495 - - 0.798 0.828 - - - - 0.869
42. actn3a ENSDARG00000013755, ENSDARG00000111128 22706 2.474 - - 0.876 0.852 0.746 - - - - actinin alpha 3a [Source:ZFIN;Acc:ZDB-GENE-000329-9]
43. CR354540.2 ENSDARG00000117517 18452 2.461 - - 0.828 0.744 - - - - 0.889
44. rtn2a ENSDARG00000016088 12184 2.461 - - 0.807 0.852 0.802 - - - - reticulon 2a [Source:ZFIN;Acc:ZDB-GENE-060420-1]
45. pvalb3 ENSDARG00000022817, ENSDARG00000117131 4180 2.453 - - 0.849 0.818 - - - - 0.786 parvalbumin 3 [Source:ZFIN;Acc:ZDB-GENE-040426-945]
46. mdh1b ENSDARG00000018008 3196 2.448 - - 0.818 0.765 - - - - 0.865 malate dehydrogenase 1B, NAD (soluble) [Source:ZFIN;Acc:ZDB-GENE-060929-384]
47. jph1a ENSDARG00000058603 2852 2.441 - - 0.759 0.820 - - - - 0.862 junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
48. BX294434.1 ENSDARG00000061272 6493 2.44 - - 0.729 0.812 - - - - 0.899 solute carrier family 41 member 1 [Source:NCBI gene;Acc:564564]
49. jph2 ENSDARG00000028625 6706 2.438 - - - 0.809 0.724 - - - 0.905 junctophilin 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9848]
50. atp1a2a ENSDARG00000010472, ENSDARG00000111818, ENSDARG00000115733 6341 2.435 - - 0.730 0.815 - - - - 0.890 ATPase Na+/K+ transporting subunit alpha 2 [Source:ZFIN;Acc:ZDB-GENE-001212-6]
51. casq2 ENSDARG00000008982 21802 2.432 - - 0.844 0.807 0.781 - - - - calsequestrin 2 [Source:ZFIN;Acc:ZDB-GENE-010724-12]
52. ldb3a ENSDARG00000056322, ENSDARG00000116388 2569 2.43 - - 0.716 0.845 - - - - 0.869 LIM domain binding 3a [Source:ZFIN;Acc:ZDB-GENE-040121-6]
53. pgam2 ENSDARG00000057571 23387 2.428 - - 0.729 0.893 0.806 - - - - phosphoglycerate mutase 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040116-6]
54. NRAP ENSDARG00000009341 3565 2.426 - - 0.808 0.801 0.817 - - - - nebulin-related anchoring protein [Source:ZFIN;Acc:ZDB-GENE-060616-224]
55. PTPLA PTPLA 4044 2.424 - - 0.763 0.781 - - - - 0.880
56. si:ch211-32p8.1 si:ch211-32p8.1 3402 2.42 - - 0.760 - - - 0.956 - 0.704
57. myhz1.3 ENSDARG00000067997 155509 2.406 - - 0.833 0.826 0.747 - - - - myosin, heavy polypeptide 1.3, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-070705-74]
58. vapb ENSDARG00000070435, ENSDARG00000112097 6469 2.397 - 0.889 0.744 - - 0.764 - - - VAMP (vesicle-associated membrane protein)-associated protein B and C [Source:ZFIN;Acc:ZDB-GENE-030131-2348]
59. tmem161a ENSDARG00000012790 16094 2.396 - - 0.716 0.766 - - - - 0.914 transmembrane protein 161A [Source:ZFIN;Acc:ZDB-GENE-041111-267]
60. tpi1b ENSDARG00000040988, ENSDARG00000113061 29752 2.39 - - 0.850 0.785 0.755 - - - - triosephosphate isomerase 1b [Source:ZFIN;Acc:ZDB-GENE-020416-4]
61. znf106a ENSDARG00000016651 6049 2.383 - - - 0.765 0.739 - - - 0.879 zinc finger protein 106a [Source:ZFIN;Acc:ZDB-GENE-040718-21]
62. cfl2 ENSDARG00000014106 8051 2.38 - - 0.849 0.822 0.709 - - - - cofilin 2 (muscle) [Source:ZFIN;Acc:ZDB-GENE-040426-1815]
63. nexn ENSDARG00000057317 10972 2.37 - - 0.737 0.754 - - - - 0.879 nexilin (F actin binding protein) [Source:ZFIN;Acc:ZDB-GENE-041114-92]
64. trdn ENSDARG00000041779 4283 2.361 - - 0.770 - 0.739 - - - 0.852 triadin [Source:ZFIN;Acc:ZDB-GENE-041014-193]
65. actn3b ENSDARG00000001431 15747 2.348 - - 0.776 0.844 0.728 - - - - actinin alpha 3b [Source:ZFIN;Acc:ZDB-GENE-030131-2040]
66. COL22A1 COL22A1 4473 2.335 - - 0.813 - 0.716 0.806 - - -
67. pdha1a ENSDARG00000012387, ENSDARG00000116841 8358 2.314 0.779 - - - - - - 0.725 0.810 pyruvate dehydrogenase E1 alpha 1 subunit a [Source:ZFIN;Acc:ZDB-GENE-040426-2719]
68. adss ENSDARG00000002071 5497 2.309 - - 0.735 - 0.820 - - - 0.754 adenylosuccinate synthase [Source:ZFIN;Acc:ZDB-GENE-050417-337]
69. cap2 ENSDARG00000104478 3266 2.308 - - - 0.713 0.757 - - - 0.838 CAP, adenylate cyclase-associated protein, 2 (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1758]
70. EHBP1L1 EHBP1L1 2500 2.295 - - 0.782 0.748 0.765 - - - -
71. si:dkey-117n7.3 ENSDARG00000092944 2518 2.287 - 0.864 - 0.721 0.702 - - - - si:dkey-117n7.3 [Source:ZFIN;Acc:ZDB-GENE-060503-143]
72. myoz2a ENSDARG00000012311 1373 2.279 - - 0.710 0.770 - - - - 0.799 myozenin 2a [Source:ZFIN;Acc:ZDB-GENE-040426-1880]
73. usp5_1 ENSDARG00000014517, ENSDARG00000114598 5050 2.275 - - 0.787 0.770 0.718 - - - - ubiquitin specific peptidase 5 (isopeptidase T) [Source:ZFIN;Acc:ZDB-GENE-040426-2584]
74. bin1 bin1 3199 2.275 - - 0.755 - 0.782 - - - 0.738
75. sgcd ENSDARG00000098573 4980 2.271 - - 0.712 0.747 - - - - 0.812 sarcoglycan, delta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-3684]
76. sgcb ENSDARG00000052341 4168 2.22 - - 0.715 - 0.716 - - - 0.789 sarcoglycan, beta (dystrophin-associated glycoprotein) [Source:ZFIN;Acc:ZDB-GENE-030131-6695]
77. chrna1 ENSDARG00000009021 2931 2.216 - - 0.721 0.735 - - - - 0.760 cholinergic receptor, nicotinic, alpha 1 (muscle) [Source:ZFIN;Acc:ZDB-GENE-980526-137]
78. zgc:92518 ENSDARG00000016343 3837 2.21 - - 0.717 0.755 - - - - 0.738 zgc:92518 [Source:ZFIN;Acc:ZDB-GENE-040718-53]
79. myhz1.1 ENSDARG00000067990, ENSDARG00000102414 59212 2.196 - - 0.763 0.711 - - - - 0.722 myosin, heavy polypeptide 1.1, skeletal muscle [Source:ZFIN;Acc:ZDB-GENE-000322-5]
80. rp42-pen rp42-pen 3395 2.192 - - 0.703 - 0.707 - - - 0.782
81. atp1b1b ENSDARG00000076833 10324 2.18 - - 0.750 0.715 0.715 - - - - ATPase Na+/K+ transporting subunit beta 1b [Source:ZFIN;Acc:ZDB-GENE-001127-4]
82. sgcg_1 ENSDARG00000038107 1998 2.18 - - 0.734 0.714 - - - - 0.732 sarcoglycan, gamma [Source:ZFIN;Acc:ZDB-GENE-030724-2]
83. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1.868 - 0.933 - - - - 0.935 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
84. NDUFB2 ENSDARG00000045490 9141 1.795 - 0.855 - - - - 0.940 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
85. naa15a ENSDARG00000003213 5889 1.762 0.796 0.966 - - - - - - - N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
86. myom1a ENSDARG00000061249 10230 1.748 - - 0.883 - - - - - 0.865 myomesin 1a (skelemin) [Source:ZFIN;Acc:ZDB-GENE-030131-2856]
87. farsb ENSDARG00000016864 6776 1.747 0.801 0.946 - - - - - - - phenylalanyl-tRNA synthetase subunit beta [Source:ZFIN;Acc:ZDB-GENE-021206-2]
88. ndufv2 ENSDARG00000013044 3758 1.74 0.801 0.939 - - - - - - - NADH:ubiquinone oxidoreductase core subunit V2 [Source:ZFIN;Acc:ZDB-GENE-040426-1713]
89. pdlim5b ENSDARG00000027600 4252 1.739 0.801 - - - - - 0.938 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
90. atp5c1 31368 1.731 - - - - - - 0.939 0.792 - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
91. rps6 ENSDARG00000019778 87546 1.73 - - - - - 0.798 0.932 - - ribosomal protein S6 [Source:ZFIN;Acc:ZDB-GENE-040801-8]
92. ist1 ENSDARG00000051888 4536 1.722 0.799 - - - - - 0.923 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
93. ABHD12B ABHD12B 1877 1.721 0.795 - - - - - 0.926 - -
94. capza1b ENSDARG00000056090, ENSDARG00000109842, ENSDARG00000110402 12199 1.712 - - - - - 0.903 - - 0.809 capping actin protein of muscle Z-line subunit alpha 1b [Source:ZFIN;Acc:ZDB-GENE-031002-24]
95. Sep-02 Sep-02 10074 1.707 0.795 0.912 - - - - - - -
96. casq1b ENSDARG00000018105 2643 1.682 - - - 0.802 - - - - 0.880 calsequestrin 1b [Source:ZFIN;Acc:ZDB-GENE-060929-1070]
97. mylpfa ENSDARG00000053254, ENSDARG00000112448, ENSDARG00000113256 271486 1.677 - - 0.868 - 0.809 - - - - myosin light chain, phosphorylatable, fast skeletal muscle a [Source:ZFIN;Acc:ZDB-GENE-990712-15]
98. ryr1b ENSDARG00000023797 5693 1.676 - - 0.781 - - - - - 0.895 ryanodine receptor 1b (skeletal) [Source:ZFIN;Acc:ZDB-GENE-070705-417]
99. eef2l2 ENSDARG00000035256 6815 1.674 - - 0.827 0.847 - - - - - eukaryotic translation elongation factor 2, like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8112]
100. tnnt3b ENSDARG00000068457 101827 1.67 - - 0.821 0.849 - - - - - troponin T type 3b (skeletal, fast) [Source:ZFIN;Acc:ZDB-GENE-030520-2]

There are 741 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA