Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmie

Gene Name Gene ID Reads Annotation
tmie ENSDARG00000069423 305 transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]










Genes with expression patterns similar to tmie

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmie ENSDARG00000069423 305 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane inner ear [Source:ZFIN;Acc:ZDB-GENE-061207-9]
2. STMN3 ENSDARG00000038465 1009 4.288 0.801 - - 0.858 - 0.798 0.970 0.861 - stathmin-like 3 [Source:ZFIN;Acc:ZDB-GENE-081124-2]
3. sypb ENSDARG00000002230 262 3.587 0.845 0.959 - - - 0.811 0.972 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
4. snap25b ENSDARG00000058117 469 3.582 0.840 0.959 - 0.799 - - 0.984 - - synaptosomal-associated protein, 25b [Source:ZFIN;Acc:ZDB-GENE-980526-392]
5. si:dkey-169l5.3 si:dkey-169l5.3 239 3.529 0.879 - - - - 0.790 0.952 0.908 -
6. gabrg2 ENSDARG00000053665 434 3.511 0.763 0.946 - - - 0.924 0.878 - - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
7. rusc1 ENSDARG00000078125 617 3.408 0.727 0.903 - - - 0.793 0.985 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
8. grin1a ENSDARG00000027828 1327 3.366 0.745 - - - - 0.862 0.942 0.817 - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
9. slc35g2b ENSDARG00000045447 378 3.314 0.826 - - 0.804 - 0.787 0.897 - - solute carrier family 35, member G2b [Source:ZFIN;Acc:ZDB-GENE-050320-142]
10. scn8ab ENSDARG00000018032, ENSDARG00000112543 883 3.27 0.834 - - - - 0.705 0.895 0.836 - sodium channel, voltage gated, type VIII, alpha subunit b [Source:ZFIN;Acc:ZDB-GENE-060906-2]
11. chodl ENSDARG00000034528, ENSDARG00000109583, ENSDARG00000111154 1306 3.256 0.847 0.790 - - - 0.790 0.829 - - chondrolectin [Source:ZFIN;Acc:ZDB-GENE-050417-36]
12. lhx1a ENSDARG00000014018 958 3.249 0.846 - - 0.820 - 0.727 0.856 - - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
13. sept5a ENSDARG00000013843 1206 3.158 0.777 0.814 - - - 0.703 0.864 - - septin 5a [Source:ZFIN;Acc:ZDB-GENE-030131-7868]
14. neurog1 ENSDARG00000056130 3924 2.865 0.925 - - - - 0.954 0.986 - - neurogenin 1 [Source:ZFIN;Acc:ZDB-GENE-990415-174]
15. her2 ENSDARG00000038205 3219 2.85 0.959 - - - - 0.922 0.969 - - hairy-related 2 [Source:ZFIN;Acc:ZDB-GENE-980526-274]
16. syt12 ENSDARG00000101776 215 2.799 0.852 - - - - 0.972 0.975 - - synaptotagmin XII [Source:ZFIN;Acc:ZDB-GENE-081022-147]
17. nova2 ENSDARG00000017673 7685 2.798 0.949 - - - - 0.873 0.976 - - neuro-oncological ventral antigen 2 [Source:ZFIN;Acc:ZDB-GENE-080211-1]
18. nes ENSDARG00000088805 2710 2.773 0.968 - - - - 0.855 0.950 - - nestin [Source:ZFIN;Acc:ZDB-GENE-071119-2]
19. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.77 0.948 - - - - 0.857 0.965 - - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
20. gpr186 ENSDARG00000094860 53 2.767 - - - 0.956 - 0.890 0.921 - - G protein-coupled receptor 186 [Source:ZFIN;Acc:ZDB-GENE-060503-489]
21. CABZ01111990.1 CABZ01111990.1 4374 2.767 0.880 - - - - 0.931 0.956 - -
22. RPH3A RPH3A 309 2.763 0.838 0.974 - - - - 0.951 - -
23. nell2b ENSDARG00000062797 854 2.743 0.854 - - - - 0.931 0.958 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
24. AGO1 ENSDARG00000092644 4521 2.736 0.857 - - - - 0.892 0.987 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
25. slc18a3a ENSDARG00000006356 1285 2.736 0.897 - - - - 0.867 0.972 - - solute carrier family 18 (vesicular acetylcholine transporter), member 3a [Source:ZFIN;Acc:ZDB-GENE-060929-990]
26. cyfip2 ENSDARG00000036375, ENSDARG00000110155, ENSDARG00000114426 2788 2.733 0.883 - - - - 0.889 0.961 - - cytoplasmic FMR1 interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-080724-2]
27. onecut1 ENSDARG00000007982, ENSDARG00000112251 6307 2.729 0.909 - - - - 0.857 0.963 - - one cut homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1469]
28. nhlh2 ENSDARG00000025495 1860 2.729 0.840 - - - - 0.938 0.951 - - nescient helix loop helix 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1809]
29. C8H1orf106 C8H1orf106 2690 2.727 0.830 - - - - 0.960 0.937 - -
30. epha4b ENSDARG00000011600 3110 2.72 0.929 - - - - 0.869 0.922 - - eph receptor A4b [Source:ZFIN;Acc:ZDB-GENE-030826-6]
31. vim ENSDARG00000010008 3551 2.714 0.958 - - - - 0.858 0.898 - - vimentin [Source:ZFIN;Acc:ZDB-GENE-011212-3]
32. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.712 0.886 - - - - 0.842 0.984 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
33. celf4 ENSDARG00000070045 1537 2.711 0.874 - - - - 0.902 0.935 - - CUGBP, Elav-like family member 4 [Source:ZFIN;Acc:ZDB-GENE-040718-300]
34. chat chat 463 2.71 0.837 - - - - 0.883 0.990 - -
35. ctnnd2b ENSDARG00000003779 964 2.709 0.847 - - - - 0.897 0.965 - - catenin (cadherin-associated protein), delta 2b [Source:ZFIN;Acc:ZDB-GENE-070912-532]
36. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 2.709 - - - 0.913 - 0.858 0.938 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]
37. EPB41L1 EPB41L1 1896 2.704 0.842 - - - - 0.940 0.922 - -
38. fyna ENSDARG00000011370 1679 2.702 0.875 - - - - 0.896 0.931 - - FYN proto-oncogene, Src family tyrosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030903-5]
39. slc8a2b ENSDARG00000100592 598 2.702 0.860 - - - - 0.867 0.975 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
40. CHL1 CHL1 1553 2.694 0.866 - - - - 0.870 0.958 - -
41. nadl1.1 1200 2.687 0.869 - - - - 0.890 0.928 - - neural adhesion molecule L1.1, transcript variant X1
42. CU928222.1 ENSDARG00000097436 1662 2.68 0.935 - - - - 0.804 0.941 - -
43. pax6a ENSDARG00000103379 3061 2.679 0.859 - - - - 0.873 0.947 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
44. sox19b ENSDARG00000040266 532 2.674 0.815 - - - - 0.916 0.943 - - SRY (sex determining region Y)-box 19b [Source:ZFIN;Acc:ZDB-GENE-010111-1]
45. nrarpb ENSDARG00000018958 6225 2.671 0.929 - - - - 0.776 0.966 - - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
46. pcp4a ENSDARG00000053130 1024 2.668 0.899 0.826 - - - - 0.943 - - Purkinje cell protein 4a [Source:ZFIN;Acc:ZDB-GENE-031118-105]
47. SPOCK1 ENSDARG00000074644 794 2.667 0.865 - - - - 0.853 0.949 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
48. gfap ENSDARG00000025301 5584 2.667 0.949 - - - - 0.751 0.967 - - glial fibrillary acidic protein [Source:ZFIN;Acc:ZDB-GENE-990914-3]
49. calca ENSDARG00000056590 150 2.665 0.750 - - - - 0.953 0.962 - - calcitonin/calcitonin-related polypeptide, alpha [Source:ZFIN;Acc:ZDB-GENE-040718-173]
50. tmem35 ENSDARG00000052567 5685 2.665 0.799 - - - - 0.953 0.913 - - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
51. CABZ01080599.2 CABZ01080599.2 192 2.662 - - - - - 0.841 0.905 0.916 -
52. PPP2R5B ENSDARG00000054931 213 2.662 0.857 - - - - 0.865 0.940 - - protein phosphatase 2, regulatory subunit B', beta [Source:ZFIN;Acc:ZDB-GENE-101208-1]
53. chga ENSDARG00000008829 1086 2.657 0.870 - - - - 0.871 0.916 - - chromogranin A [Source:ZFIN;Acc:ZDB-GENE-041010-161]
54. dbx2 2971 2.654 0.809 - - - - 0.889 0.956 - - developing brain homeobox 2
55. atp6v0cb ENSDARG00000036577 3472 2.653 0.863 - - - - 0.821 0.969 - - ATPase H+ transporting V0 subunit cb [Source:ZFIN;Acc:ZDB-GENE-030131-4127]
56. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.651 0.796 - - - - 0.929 0.926 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
57. clstn1 ENSDARG00000031720 5286 2.648 0.874 - - - - 0.882 0.892 - - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
58. tuba1c ENSDARG00000055216 8384 2.648 0.946 - - - - 0.755 0.947 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
59. clstn3 ENSDARG00000073883 590 2.638 0.860 - - - - 0.834 0.944 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
60. gng3 ENSDARG00000009553 2530 2.622 0.815 - - - - 0.875 0.932 - - guanine nucleotide binding protein (G protein), gamma 3 [Source:ZFIN;Acc:ZDB-GENE-010705-1]
61. dync1i1 ENSDARG00000060948 554 2.617 0.796 - - - - 0.965 0.856 - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
62. vgf ENSDARG00000105529 247 2.617 0.819 - - - - 0.835 0.963 - - VGF nerve growth factor inducible [Source:ZFIN;Acc:ZDB-GENE-121009-2]
63. SEMA7A ENSDARG00000078707 465 2.616 0.869 0.853 - - - - 0.894 - - semaphorin 7A [Source:ZFIN;Acc:ZDB-GENE-030131-3633]
64. snap91 ENSDARG00000098809 844 2.615 - 0.895 - - - 0.847 0.873 - - synaptosomal-associated protein 91 [Source:ZFIN;Acc:ZDB-GENE-100422-6]
65. CDK5R1 CDK5R1 562 2.61 0.836 - - - - 0.888 0.886 - -
66. hnrnpa3 ENSDARG00000059351 453 2.605 0.848 - - - - 0.827 0.930 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
67. syngr3a ENSDARG00000014871 405 2.605 0.813 - - - - 0.844 0.948 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
68. map7d2a ENSDARG00000068480 513 2.604 0.896 - - - - 0.797 0.911 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
69. si:dkey-17e6.2 si:dkey-17e6.2 72 2.599 - - - - - 0.710 0.951 0.938 -
70. CR847998.1 ENSDARG00000104784 518 2.596 - 0.956 - - - 0.716 0.924 - -
71. myt1b ENSDARG00000102879 5411 2.595 0.868 - - - - 0.768 0.959 - - myelin transcription factor 1b [Source:ZFIN;Acc:ZDB-GENE-090313-67]
72. rheb ENSDARG00000090213 1432 2.59 0.759 - - - - 0.904 0.927 - - Ras homolog, mTORC1 binding [Source:ZFIN;Acc:ZDB-GENE-040426-1690]
73. dpysl3 ENSDARG00000002587 4381 2.583 0.808 - - - - 0.843 0.932 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
74. BX511121.1 ENSDARG00000029997 1774 2.581 0.753 - - - - 0.906 0.922 - -
75. stx1b ENSDARG00000000503 2724 2.579 0.869 - - - - 0.755 0.955 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
76. CR848045.1 CR848045.1 459 2.578 0.701 - - - - 0.966 0.911 - -
77. rbfox3 rbfox3 1443 2.575 0.761 - - - - 0.844 0.970 - -
78. nbeaa ENSDARG00000070080 862 2.575 0.896 - - - - 0.721 0.958 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
79. pou3f2a ENSDARG00000070220 817 2.57 0.713 - - - - 0.891 0.966 - - POU class 3 homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-980526-139]
80. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.565 0.864 - - - - 0.856 0.845 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
81. si:ch211-152f6.6 si:ch211-152f6.6 278 2.562 0.855 - - - - 0.787 0.920 - -
82. CHRNB4 ENSDARG00000101677 128 2.561 0.793 - - - - 0.814 0.954 - - cholinergic receptor, nicotinic, beta 4 (neuronal) [Source:ZFIN;Acc:ZDB-GENE-120809-1]
83. dnajc5aa ENSDARG00000042948 2885 2.561 0.751 - - - - 0.856 0.954 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
84. TUBA1A ENSDARG00000001889 25294 2.556 0.818 - - - - 0.780 0.958 - - tubulin, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-090507-4]
85. CABZ01029738.1 CABZ01029738.1 327 2.548 0.858 - - - - 0.757 0.933 - -
86. GLRA3 ENSDARG00000011066 242 2.545 0.876 - - - - 0.704 0.965 - - glycine receptor, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-020402-1]
87. dbx1a ENSDARG00000086393 3161 2.545 0.802 - - - - 0.882 0.861 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
88. islr2 ENSDARG00000051875, ENSDARG00000109523 2288 2.544 0.749 - - - - 0.837 0.958 - - immunoglobulin superfamily containing leucine-rich repeat 2 [Source:ZFIN;Acc:ZDB-GENE-050320-95]
89. pcsk1 ENSDARG00000002600 404 2.541 0.784 0.914 - - - - 0.843 - - proprotein convertase subtilisin/kexin type 1 [Source:ZFIN;Acc:ZDB-GENE-071009-1]
90. map1aa ENSDARG00000059601 599 2.538 0.788 - - - - 0.876 0.874 - - microtubule-associated protein 1Aa [Source:ZFIN;Acc:ZDB-GENE-100426-2]
91. TUBB8P7_2 TUBB8P7_2 565 2.537 0.864 - - - - 0.794 0.879 - -
92. nefmb ENSDARG00000043697 2052 2.534 0.810 - - - - 0.915 0.809 - - neurofilament, medium polypeptide b [Source:ZFIN;Acc:ZDB-GENE-070103-4]
93. SLC5A7 SLC5A7 453 2.534 0.785 - - - - 0.815 0.934 - -
94. tmem59l ENSDARG00000003655 1536 2.53 0.867 - - - - 0.824 0.839 - - transmembrane protein 59-like [Source:ZFIN;Acc:ZDB-GENE-040426-2651]
95. BSN BSN 463 2.528 0.890 - - - - 0.933 0.705 - -
96. stmn2b ENSDARG00000070537 1586 2.525 0.897 - - - - 0.739 0.889 - - stathmin 2b [Source:ZFIN;Acc:ZDB-GENE-050522-207]
97. pou3f3a ENSDARG00000042032 2835 2.525 0.739 - - - - 0.886 0.900 - - POU class 3 homeobox 3a [Source:ZFIN;Acc:ZDB-GENE-980526-220]
98. EFCC1 ENSDARG00000077826 1359 2.525 0.931 - - - - 0.731 0.863 - - EF-hand and coiled-coil domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-120813-3]
99. kcnc3a ENSDARG00000055855 1821 2.524 0.816 - - - - 0.779 0.929 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
100. mapk12b ENSDARG00000006409 2246 2.521 0.816 - - - - - 0.989 0.716 - mitogen-activated protein kinase 12b [Source:ZFIN;Acc:ZDB-GENE-041210-123]

There are 2571 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA