Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmem88b

Gene Name Gene ID Reads Annotation
tmem88b ENSDARG00000069388 501 transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]










Genes with expression patterns similar to tmem88b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmem88b ENSDARG00000069388 501 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
2. emx1 ENSDARG00000039569 787 2.34 0.708 - - - - 0.786 0.846 - - empty spiracles homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-031007-7]
3. psenen ENSDARG00000068698 2777 1.792 - 0.810 - - - - - 0.982 - presenilin enhancer, gamma-secretase subunit [Source:ZFIN;Acc:ZDB-GENE-040218-1]
4. aldh3b1 ENSDARG00000013839 796 1.77 - - - - - 0.832 - 0.938 - aldehyde dehydrogenase 3 family, member B1 [Source:ZFIN;Acc:ZDB-GENE-021120-3]
5. si:dkey-238o13.4 ENSDARG00000078847 884 1.762 - - - - - - 0.791 0.971 - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
6. CASKIN2_1 CASKIN2_1 2299 1.755 - - - - - - 0.763 0.992 -
7. ednraa ENSDARG00000011876, ENSDARG00000114764 1573 1.745 - - - - - - 0.814 0.931 - endothelin receptor type Aa [Source:ZFIN;Acc:ZDB-GENE-010906-2]
8. kdm5bb ENSDARG00000003098 531 1.731 - - - - - 0.743 - 0.988 - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
9. phf10 ENSDARG00000070084 1210 1.725 - 0.740 - - - - - 0.985 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
10. aldh1a2 ENSDARG00000053493, ENSDARG00000113122 1679 1.725 - - - - - 0.783 0.942 - - aldehyde dehydrogenase 1 family, member A2 [Source:ZFIN;Acc:ZDB-GENE-011010-3]
11. asic1a ENSDARG00000008329 347 1.698 - 0.767 - - - - - 0.931 - acid-sensing (proton-gated) ion channel 1a [Source:ZFIN;Acc:ZDB-GENE-040513-2]
12. wu:fj13e08 1223 1.695 - - - - - - 0.701 0.994 - wu:fj13e08
13. tmprss2 ENSDARG00000098686 251 1.693 - 0.804 - - - 0.889 - - - transmembrane serine protease 2 [Source:ZFIN;Acc:ZDB-GENE-041212-48]
14. vta1 ENSDARG00000013732 6072 1.682 - 0.874 - - - - - 0.808 - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
15. trim25 ENSDARG00000104396, ENSDARG00000110468, ENSDARG00000117057 262 1.676 - 0.787 - - - 0.889 - - - tripartite motif containing 25 [Source:ZFIN;Acc:ZDB-GENE-040426-797]
16. galk1 ENSDARG00000028088 540 1.675 - - - - - 0.851 0.824 - - galactokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-79]
17. ca4c ENSDARG00000044512 102 1.662 - - - - - 0.884 0.778 - - carbonic anhydrase IV c [Source:ZFIN;Acc:ZDB-GENE-080815-6]
18. AKR1C1 AKR1C1 32 1.635 - - - - - 0.819 0.816 - -
19. dusp11 ENSDARG00000038156 2490 1.615 - - - - - 0.710 - 0.905 - dual specificity phosphatase 11 (RNA/RNP complex 1-interacting) [Source:ZFIN;Acc:ZDB-GENE-050417-226]
20. sgpl1 ENSDARG00000061375 518 1.612 - 0.795 - - - - 0.817 - - sphingosine-1-phosphate lyase 1 [Source:ZFIN;Acc:ZDB-GENE-070410-24]
21. map4k5 ENSDARG00000039125 1595 1.611 - - - - - - 0.715 0.896 - mitogen-activated protein kinase kinase kinase kinase 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6497]
22. hpcal4 ENSDARG00000070491 365 1.606 - - - - - 0.866 0.740 - - hippocalcin like 4 [Source:ZFIN;Acc:ZDB-GENE-060503-307]
23. BX004812.1 ENSDARG00000096968 5467 1.605 - - - - - - 0.728 0.877 -
24. nav2b ENSDARG00000001879 1121 1.6 - - - - - 0.847 0.753 - - neuron navigator 2b [Source:ZFIN;Acc:ZDB-GENE-061207-13]
25. CABZ01044136.1 CABZ01044136.1 2596 1.598 - 0.728 - - - - - 0.870 -
26. pou5f3 ENSDARG00000044774 212 1.571 - - - - - 0.805 0.766 - - POU domain, class 5, transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-980526-485]
27. nos1apa ENSDARG00000078725, ENSDARG00000105071 3815 1.569 0.829 - - - - - 0.740 - - nitric oxide synthase 1 (neuronal) adaptor protein a [Source:ZFIN;Acc:ZDB-GENE-081024-1]
28. cdx1b ENSDARG00000116139 113 1.56 - - - - - 0.720 0.840 - - caudal type homeobox 1 b [Source:ZFIN;Acc:ZDB-GENE-070615-29]
29. synj2bp ENSDARG00000028321 1143 1.555 - - - - - 0.770 0.785 - - synaptojanin 2 binding protein [Source:ZFIN;Acc:ZDB-GENE-030131-6531]
30. cfd ENSDARG00000039579, ENSDARG00000110892, ENSDARG00000115542 670 1.548 0.786 - - - - 0.762 - - - complement factor D (adipsin) [Source:ZFIN;Acc:ZDB-GENE-050522-411]
31. FP236810.2 ENSDARG00000113218 140 1.538 - - - - - 0.810 0.728 - - UDP-glucuronosyltransferase 2B20-like [Source:NCBI gene;Acc:571561]
32. bpnt1 ENSDARG00000043684 78 1.533 - - - - - 0.767 0.766 - - bisphosphate nucleotidase 1 [Source:ZFIN;Acc:ZDB-GENE-040718-46]
33. RBM47 ENSDARG00000061985 2498 1.528 - - - - - 0.733 0.795 - - RNA binding motif protein 47 [Source:ZFIN;Acc:ZDB-GENE-030131-9612]
34. srrm2 ENSDARG00000037965 1967 1.522 - 0.779 - - - 0.743 - - - serine/arginine repetitive matrix 2 [Source:ZFIN;Acc:ZDB-GENE-050522-399]
35. slc25a48 ENSDARG00000021250 1057 1.519 - 0.703 - - - 0.816 - - - solute carrier family 25, member 48 [Source:ZFIN;Acc:ZDB-GENE-040718-60]
36. CU571162.1 CU571162.1 652 1.517 - 0.793 - - - - 0.724 - -
37. ndrg1a ENSDARG00000032849 2406 1.516 0.791 - - - - 0.725 - - - N-myc downstream regulated 1a [Source:ZFIN;Acc:ZDB-GENE-030826-34]
38. SDSL ENSDARG00000074698 34 1.515 - - - - - 0.769 0.746 - - serine dehydratase-like [Source:ZFIN;Acc:ZDB-GENE-131121-410]
39. adcy2b ENSDARG00000014588 278 1.511 - - - - - 0.778 0.733 - - adenylate cyclase 2b (brain) [Source:ZFIN;Acc:ZDB-GENE-060503-69]
40. socs8 socs8 128 1.507 - 0.710 - - - 0.797 - - -
41. AL928724.1 ENSDARG00000097525 421 1.5 - 0.711 - - - 0.789 - - -
42. hsd20b2 ENSDARG00000031336, ENSDARG00000111087 246 1.497 - - - - - 0.793 0.704 - - hydroxysteroid (20-beta) dehydrogenase 2 [Source:ZFIN;Acc:ZDB-GENE-030804-21]
43. HHLA2_1 HHLA2_1 456 1.496 - 0.736 - - - 0.760 - - -
44. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.479 - - - - - 0.751 0.728 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
45. cldnh ENSDARG00000069503 2410 1.475 0.740 - - - - - 0.735 - - claudin h [Source:ZFIN;Acc:ZDB-GENE-010328-8]
46. ccdc151 ENSDARG00000062978, ENSDARG00000113033 316 1.473 0.719 0.754 - - - - - - - coiled-coil domain containing 151 [Source:ZFIN;Acc:ZDB-GENE-061013-787]
47. itga5 ENSDARG00000006353 1876 1.461 - - - - - 0.729 0.732 - - integrin, alpha 5 (fibronectin receptor, alpha polypeptide) [Source:ZFIN;Acc:ZDB-GENE-031116-52]
48. USP2 USP2 157 1.452 - - - - - 0.749 0.703 - -
49. ccbl1 702 1.448 - - - - - 0.739 0.709 - - cysteine conjugate-beta lyase, cytoplasmic, transcript variant X1
50. acsbg1 ENSDARG00000062077 2020 1.446 - - - - - 0.711 0.735 - - acyl-CoA synthetase bubblegum family member 1 [Source:ZFIN;Acc:ZDB-GENE-110914-219]
51. NGEF ENSDARG00000076179 445 1.446 - 0.709 - - - - 0.737 - - neuronal guanine nucleotide exchange factor [Source:ZFIN;Acc:ZDB-GENE-130530-794]
52. otomp ENSDARG00000040306 682 1.44 - - - - - 0.720 - 0.720 - otolith matrix protein [Source:ZFIN;Acc:ZDB-GENE-040709-1]
53. CABP7 CABP7 131 1.436 0.706 0.730 - - - - - - -
54. si:ch211-165d12.4 ENSDARG00000079353 330 1.434 - - - - - 0.725 0.709 - - si:ch211-165d12.4 [Source:ZFIN;Acc:ZDB-GENE-080303-7]
55. kmt2ca ENSDARG00000079312 2109 1.419 - 0.701 - - - - 0.718 - - lysine (K)-specific methyltransferase 2Ca [Source:ZFIN;Acc:ZDB-GENE-080520-3]
56. cish ENSDARG00000060316 329 1.411 - - - - - 0.709 0.702 - - cytokine inducible SH2-containing protein [Source:ZFIN;Acc:ZDB-GENE-050907-1]
57. ftr15 122 0.998 - - - - - - - 0.998 - finTRIM family, member 15
58. ankrd37 ENSDARG00000056376 131 0.998 - - - - - - - 0.998 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
59. SIPA1 SIPA1 302 0.998 - - - - - - - 0.998 -
60. C20H1orf198 C20H1orf198 246 0.998 - - - - - - - 0.998 -
61. lig4 ENSDARG00000060620 369 0.998 - - - - - - - 0.998 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
62. SYNDIG1 ENSDARG00000100751 165 0.998 - - - - - - - 0.998 - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
63. l3mbtl1a ENSDARG00000014828 119 0.998 - - - - - - - 0.998 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
64. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.998 - - - - - - - 0.998 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
65. mul1b ENSDARG00000052527 431 0.998 - - - - - - - 0.998 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
66. si:dkey-117p18.2 si:dkey-117p18.2 104 0.998 - - - - - - - 0.998 -
67. CABZ01087670.1 CABZ01087670.1 411 0.998 - - - - - - - 0.998 -
68. slc29a4 ENSDARG00000059690 478 0.998 - - - - - - - 0.998 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
69. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.997 - - - - - - - 0.997 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
70. cetn3 ENSDARG00000011825 1087 0.997 - - - - - - - 0.997 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
71. kif7 ENSDARG00000033099 971 0.997 - - - - - - - 0.997 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
72. cbll1 ENSDARG00000015222 995 0.997 - - - - - - - 0.997 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
73. ptprz1b ENSDARG00000020871 435 0.997 - - - - - - - 0.997 - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
74. sult4a1 ENSDARG00000101967 205 0.997 - - - - - - - 0.997 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
75. atn1 ENSDARG00000092067 257 0.997 - - - - - - - 0.997 - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
76. cks2 ENSDARG00000071410, ENSDARG00000116198 966 0.996 - - - - - - - 0.996 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
77. bcl9 ENSDARG00000036687 1124 0.996 - - - - - - - 0.996 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
78. abcb6b ENSDARG00000074254 600 0.996 - - - - - - - 0.996 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
79. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.996 - - - - - - - 0.996 - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
80. GPR101 ENSDARG00000039218 157 0.996 - - - - - - - 0.996 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
81. lrrc24 ENSDARG00000101704 224 0.996 - - - - - - - 0.996 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
82. si:ch211-113p18.3 ENSDARG00000087835 377 0.996 - - - - - - - 0.996 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
83. scly ENSDARG00000073813 578 0.995 - - - - - - - 0.995 - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
84. smcr8a ENSDARG00000052818 559 0.995 - - - - - - - 0.995 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
85. si:ch211-241n15.2 si:ch211-241n15.2 435 0.995 - - - - - - - 0.995 -
86. ANO8 ANO8 380 0.995 - - - - - - - 0.995 -
87. itga11a ENSDARG00000036086, ENSDARG00000111495 254 0.995 - - - - - - - 0.995 - integrin, alpha 11a [Source:ZFIN;Acc:ZDB-GENE-050324-1]
88. DGKI 306 0.995 - - - - - - - 0.995 - diacylglycerol kinase, iota
89. zgc:112962 ENSDARG00000069102 431 0.995 - - - - - - - 0.995 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
90. prpf31 ENSDARG00000095904 526 0.994 - - - - - - - 0.994 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
91. tceb1a 969 0.994 - - - - - - - 0.994 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
92. CABZ01069006.1 CABZ01069006.1 363 0.994 - - - - - - - 0.994 -
93. GATC ENSDARG00000056855 551 0.994 - - - - - - - 0.994 - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
94. SPAG9 ENSDARG00000078142 629 0.994 - - - - - - - 0.994 - sperm associated antigen 9 [Source:HGNC Symbol;Acc:HGNC:14524]
95. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 0.994 - - - - - - - 0.994 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
96. atcaya ENSDARG00000071678 344 0.994 - - - - - - - 0.994 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
97. pmpca ENSDARG00000102607 1024 0.993 - - - - - - - 0.993 - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
98. PREB ENSDARG00000101602 626 0.993 - - - - - - - 0.993 - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
99. vps36 ENSDARG00000057021 636 0.993 - - - - - - - 0.993 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
100. tmx1 ENSDARG00000019487 1129 0.993 - - - - - - - 0.993 - thioredoxin-related transmembrane protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2327]

There are 1182 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA