Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmem88a

Gene Name Gene ID Reads Annotation
tmem88a ENSDARG00000056920 536 transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]










Genes with expression patterns similar to tmem88a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmem88a ENSDARG00000056920 536 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein 88 a [Source:ZFIN;Acc:ZDB-GENE-040426-1808]
2. C1H7orf55 C1H7orf55 2552 1.771 - - - - 0.973 0.798 - - -
3. katnbl1 ENSDARG00000042522 1086 1.766 - 0.776 - - 0.990 - - - - katanin p80 subunit B-like 1 [Source:ZFIN;Acc:ZDB-GENE-030131-4155]
4. si:ch211-80h18.1 ENSDARG00000078522 1941 1.734 - - - - 0.935 - 0.799 - - si:ch211-80h18.1 [Source:ZFIN;Acc:ZDB-GENE-070705-257]
5. prdm16 prdm16 1346 1.733 0.741 - - - 0.992 - - - -
6. si:dkey-20j1.4 si:dkey-20j1.4 406 1.724 - - - - 0.992 - 0.732 - -
7. ccdc146 ENSDARG00000004794 108 1.712 0.899 - - - - - 0.813 - - coiled-coil domain containing 146 [Source:ZFIN;Acc:ZDB-GENE-041210-217]
8. dhfr ENSDARG00000004251 1824 1.712 - - - - 0.968 - 0.744 - - dihydrofolate reductase [Source:ZFIN;Acc:ZDB-GENE-010406-5]
9. wdr24 ENSDARG00000025507 505 1.709 0.716 - - - 0.993 - - - - WD repeat domain 24 [Source:ZFIN;Acc:ZDB-GENE-040426-2012]
10. hey2 ENSDARG00000013441 540 1.696 - - - - 0.990 0.706 - - - hes-related family bHLH transcription factor with YRPW motif 2 [Source:ZFIN;Acc:ZDB-GENE-000526-1]
11. pip5k2 pip5k2 5743 1.685 - - - - 0.916 - 0.769 - -
12. ccl25b ENSDARG00000070873 454 1.656 - 0.754 - - - - 0.902 - - chemokine (C-C motif) ligand 25b [Source:ZFIN;Acc:ZDB-GENE-110222-2]
13. ms4a17a.9 ENSDARG00000094854 933 1.576 - - - - - 0.778 0.798 - - membrane-spanning 4-domains, subfamily A, member 17A.9 [Source:ZFIN;Acc:ZDB-GENE-050320-79]
14. klf11b ENSDARG00000013794 646 1.574 0.844 0.730 - - - - - - - Kruppel-like factor 11b [Source:ZFIN;Acc:ZDB-GENE-061103-82]
15. RIN3 ENSDARG00000077618 745 1.565 0.799 - - - - - 0.766 - - Ras and Rab interactor 3 [Source:ZFIN;Acc:ZDB-GENE-030131-8871]
16. ttyh2l ENSDARG00000010727 204 1.562 0.755 - - - - - 0.807 - - tweety homolog 2, like [Source:ZFIN;Acc:ZDB-GENE-040426-2394]
17. nanos1 ENSDARG00000109337 2494 1.557 0.770 - - - - - 0.787 - - nanos homolog 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1623]
18. ddx27 ENSDARG00000091831 1471 1.55 - - - - - 0.733 0.817 - - DEAD (Asp-Glu-Ala-Asp) box polypeptide 27 [Source:ZFIN;Acc:ZDB-GENE-031001-8]
19. dcps ENSDARG00000009862 571 1.538 - 0.822 - - - - 0.716 - - decapping enzyme, scavenger [Source:ZFIN;Acc:ZDB-GENE-040311-1]
20. bmp7a ENSDARG00000018260 92 1.535 - 0.760 - - - - 0.775 - - bone morphogenetic protein 7a [Source:ZFIN;Acc:ZDB-GENE-000208-25]
21. cxcl-c5c cxcl-c5c 182 1.535 - - - - - 0.821 0.714 - -
22. mta3 ENSDARG00000054903, ENSDARG00000113436 353 1.518 - 0.745 - - - - 0.773 - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
23. snupn ENSDARG00000008395 507 1.513 - - - - - 0.700 0.813 - - snurportin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3464]
24. SLC41A2 SLC41A2 202 1.513 - 0.761 - - - - 0.752 - -
25. si:ch211-214e3.5 ENSDARG00000074270 755 1.5 - 0.772 - - - - 0.728 - - si:ch211-214e3.5 [Source:ZFIN;Acc:ZDB-GENE-050208-19]
26. scp2b ENSDARG00000102356 951 1.491 - 0.741 - - - 0.750 - - - sterol carrier protein 2b [Source:ZFIN;Acc:ZDB-GENE-041010-196]
27. si:dkey-239h2.3 ENSDARG00000092033 398 1.471 - - - 0.739 - - 0.732 - - si:dkey-239h2.3 [Source:ZFIN;Acc:ZDB-GENE-081104-383]
28. sdk1a ENSDARG00000078866 159 1.466 - 0.722 - - - 0.744 - - - sidekick cell adhesion molecule 1a [Source:ZFIN;Acc:ZDB-GENE-081104-374]
29. hnf1ba ENSDARG00000006615, ENSDARG00000115522 1124 1.461 0.710 - - - - - 0.751 - - HNF1 homeobox Ba [Source:ZFIN;Acc:ZDB-GENE-020104-1]
30. TMEM98 ENSDARG00000059743 214 1.461 - - - - - - 0.760 0.701 - transmembrane protein 98 [Source:ZFIN;Acc:ZDB-GENE-070112-1092]
31. angpt1 ENSDARG00000030364 588 1.459 - 0.747 - - - 0.712 - - - angiopoietin 1 [Source:ZFIN;Acc:ZDB-GENE-010817-1]
32. nav2b ENSDARG00000001879 1121 1.452 - 0.701 - - - - 0.751 - - neuron navigator 2b [Source:ZFIN;Acc:ZDB-GENE-061207-13]
33. dnal1 ENSDARG00000034042 339 1.448 - - - 0.718 - - 0.730 - - dynein, axonemal, light chain 1 [Source:ZFIN;Acc:ZDB-GENE-040801-178]
34. PEG3 PEG3 644 1.445 - 0.742 - - - 0.703 - - -
35. tmem251 ENSDARG00000042341 1102 1.44 - 0.728 - - - - 0.712 - - transmembrane protein 251 [Source:ZFIN;Acc:ZDB-GENE-041001-121]
36. cuedc2 ENSDARG00000039365 484 0.997 - - - - 0.997 - - - - CUE domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6283]
37. pfkpb ENSDARG00000012801 223 0.996 - - - - 0.996 - - - - phosphofructokinase, platelet b [Source:ZFIN;Acc:ZDB-GENE-070912-634]
38. fam193b ENSDARG00000102831 442 0.996 - - - - 0.996 - - - - family with sequence similarity 193, member B [Source:ZFIN;Acc:ZDB-GENE-111102-1]
39. ccr10 ENSDARG00000040643 255 0.996 - - - - 0.996 - - - - chemokine (C-C motif) receptor 10 [Source:ZFIN;Acc:ZDB-GENE-040718-424]
40. ago4 ENSDARG00000100854 496 0.996 - - - - 0.996 - - - - argonaute RISC catalytic component 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5357]
41. lrch2 ENSDARG00000075580, ENSDARG00000116418 255 0.996 - - - - 0.996 - - - - leucine-rich repeats and calponin homology (CH) domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-080114-1]
42. myl2b ENSDARG00000053424 226 0.996 - - - - 0.996 - - - - myosin, light chain 2b, regulatory, cardiac, slow [Source:ZFIN;Acc:ZDB-GENE-060331-137]
43. FOXL2 239 0.996 - - - - 0.996 - - - - forkhead box L2, transcript variant X1
44. gorab ENSDARG00000042031 483 0.996 - - - - 0.996 - - - - golgin, rab6-interacting [Source:ZFIN;Acc:ZDB-GENE-040426-1384]
45. dopey1 438 0.995 - - - - 0.995 - - - - dopey family member 1, transcript variant X4
46. ccdc28b ENSDARG00000011222 528 0.995 - - - - 0.995 - - - - coiled-coil domain containing 28B [Source:ZFIN;Acc:ZDB-GENE-060208-3]
47. ercc6 ENSDARG00000075612 1175 0.995 - - - - 0.995 - - - - excision repair cross-complementation group 6 [Source:ZFIN;Acc:ZDB-GENE-070228-1]
48. slc2a15b ENSDARG00000053269 899 0.995 - - - - 0.995 - - - - solute carrier family 2 (facilitated glucose transporter), member 15b [Source:ZFIN;Acc:ZDB-GENE-050508-1]
49. med13b ENSDARG00000003910 1143 0.995 - - - - 0.995 - - - - mediator complex subunit 13b [Source:ZFIN;Acc:ZDB-GENE-030131-3529]
50. nefma ENSDARG00000021351 790 0.995 - - - - 0.995 - - - - neurofilament, medium polypeptide a [Source:ZFIN;Acc:ZDB-GENE-050522-205]
51. spag7 ENSDARG00000011555 3224 0.995 - - - - 0.995 - - - - sperm associated antigen 7 [Source:ZFIN;Acc:ZDB-GENE-040426-1632]
52. larp7 ENSDARG00000017315 1194 0.995 - - - - 0.995 - - - - La ribonucleoprotein domain family, member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-6896]
53. lig4 ENSDARG00000060620 369 0.995 - - - - 0.995 - - - - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
54. BX005008.2 BX005008.2 708 0.994 - - - - 0.994 - - - -
55. TUSC5_1 TUSC5_1 320 0.994 - - - - 0.994 - - - -
56. fut8 fut8 652 0.994 - - - - 0.994 - - - -
57. atxn7l3 ENSDARG00000029331 531 0.994 - - - - 0.994 - - - - ataxin 7-like 3 [Source:ZFIN;Acc:ZDB-GENE-030616-253]
58. tab1 ENSDARG00000036613 445 0.993 - - - - 0.993 - - - - TGF-beta activated kinase 1/MAP3K7 binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-060628-1]
59. pvalb6 ENSDARG00000009311, ENSDARG00000113947 248 0.993 - - - - 0.993 - - - - parvalbumin 6 [Source:ZFIN;Acc:ZDB-GENE-040912-95]
60. FBXO33 ENSDARG00000075400 1164 0.993 - - - - 0.993 - - - - F-box protein 33 [Source:ZFIN;Acc:ZDB-GENE-100618-2]
61. msh2 ENSDARG00000018022, ENSDARG00000115185 1301 0.993 - - - - 0.993 - - - - mutS homolog 2 (E. coli) [Source:ZFIN;Acc:ZDB-GENE-040426-2932]
62. lgi1a ENSDARG00000020493 1218 0.993 - - - - 0.993 - - - - leucine-rich, glioma inactivated 1a [Source:ZFIN;Acc:ZDB-GENE-030131-1731]
63. exoc3l4 ENSDARG00000058180 923 0.993 - - - - 0.993 - - - - exocyst complex component 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-081028-71]
64. aspg ENSDARG00000052942 1406 0.993 - - - - 0.993 - - - - asparaginase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-070820-14]
65. clu ENSDARG00000010434 498 0.992 - - - - 0.992 - - - - clusterin [Source:ZFIN;Acc:ZDB-GENE-040426-1774]
66. msxe msxe 362 0.992 - - - - 0.992 - - - -
67. zswim8 ENSDARG00000069397, ENSDARG00000112914 2378 0.992 - - - - 0.992 - - - - zinc finger, SWIM-type containing 8 [Source:ZFIN;Acc:ZDB-GENE-050320-59]
68. MANBAL ENSDARG00000059853 636 0.992 - - - - 0.992 - - - - mannosidase beta like [Source:ZFIN;Acc:ZDB-GENE-161222-1]
69. si:ch211-150o23.2 ENSDARG00000092746 788 0.992 - - - - 0.992 - - - - si:ch211-150o23.2 [Source:ZFIN;Acc:ZDB-GENE-060503-386]
70. bloc1s3 ENSDARG00000068828 502 0.992 - - - - 0.992 - - - - biogenesis of lysosomal organelles complex-1, subunit 3 [Source:ZFIN;Acc:ZDB-GENE-050913-10]
71. ypel5 ENSDARG00000088929 1011 0.992 - - - - 0.992 - - - - yippee-like 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1220]
72. dbr1 ENSDARG00000056923, ENSDARG00000116603 2196 0.992 - - - - 0.992 - - - - debranching RNA lariats 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2466]
73. CR759921.2 CR759921.2 583 0.992 - - - - 0.992 - - - -
74. smurf1 ENSDARG00000016086 878 0.992 - - - - 0.992 - - - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
75. sox1a ENSDARG00000069866, ENSDARG00000110682, ENSDARG00000114571 576 0.991 - - - - 0.991 - - - - SRY (sex determining region Y)-box 1a [Source:ZFIN;Acc:ZDB-GENE-040718-186]
76. pip5k1bb ENSDARG00000006508 2812 0.991 - - - - 0.991 - - - - phosphatidylinositol-4-phosphate 5-kinase, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-040912-141]
77. cenpi ENSDARG00000052565 482 0.991 - - - - 0.991 - - - - centromere protein I [Source:ZFIN;Acc:ZDB-GENE-060810-127]
78. mnat1 ENSDARG00000002077 287 0.991 - - - - 0.991 - - - - MNAT CDK-activating kinase assembly factor 1 [Source:ZFIN;Acc:ZDB-GENE-041010-203]
79. toporsb ENSDARG00000105028 1898 0.991 - - - - 0.991 - - - - topoisomerase I binding, arginine/serine-rich b [Source:ZFIN;Acc:ZDB-GENE-110728-3]
80. bmi1a ENSDARG00000006010 2061 0.991 - - - - 0.991 - - - - bmi1 polycomb ring finger oncogene 1a [Source:ZFIN;Acc:ZDB-GENE-030131-224]
81. SENP1 SENP1 1122 0.99 - - - - 0.990 - - - -
82. brd9 ENSDARG00000017143 936 0.99 - - - - 0.990 - - - - bromodomain containing 9 [Source:ZFIN;Acc:ZDB-GENE-060502-1]
83. larp4b ENSDARG00000062146 1601 0.99 - - - - 0.990 - - - - La ribonucleoprotein domain family, member 4B [Source:ZFIN;Acc:ZDB-GENE-061027-39]
84. aldh16a1 ENSDARG00000037935 617 0.99 - - - - 0.990 - - - - aldehyde dehydrogenase 16 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-070112-2062]
85. usp16 ENSDARG00000060633 684 0.99 - - - - 0.990 - - - - ubiquitin specific peptidase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-4153]
86. smn1 ENSDARG00000018494 1024 0.989 - - - - 0.989 - - - - survival of motor neuron 1, telomeric [Source:ZFIN;Acc:ZDB-GENE-990715-16]
87. comtb ENSDARG00000025679, ENSDARG00000111678 1692 0.989 - - - - 0.989 - - - - catechol-O-methyltransferase b [Source:ZFIN;Acc:ZDB-GENE-040724-164]
88. rab5b ENSDARG00000016059, ENSDARG00000114966 1252 0.989 - - - - 0.989 - - - - RAB5B, member RAS oncogene family [Source:ZFIN;Acc:ZDB-GENE-040426-2593]
89. GRAMD4 GRAMD4 1967 0.989 - - - - 0.989 - - - -
90. dvl3a ENSDARG00000015707 1132 0.989 - - - - 0.989 - - - - dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
91. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.989 - - - - 0.989 - - - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
92. TRAPPC10 ENSDARG00000098118 954 0.989 - - - - 0.989 - - - - trafficking protein particle complex 10 [Source:ZFIN;Acc:ZDB-GENE-131115-1]
93. odz4 odz4 822 0.988 - - - - 0.988 - - - -
94. rfc1 ENSDARG00000054799 1416 0.988 - - - - 0.988 - - - - replication factor C (activator 1) 1 [Source:ZFIN;Acc:ZDB-GENE-070410-99]
95. sin3b ENSDARG00000062472 2025 0.988 - - - - 0.988 - - - - SIN3 transcription regulator family member B [Source:ZFIN;Acc:ZDB-GENE-030131-8264]
96. aatf ENSDARG00000025467, ENSDARG00000109548 796 0.988 - - - - 0.988 - - - - apoptosis antagonizing transcription factor [Source:ZFIN;Acc:ZDB-GENE-030131-9654]
97. plrg1 ENSDARG00000037283, ENSDARG00000110921 1552 0.988 - - - - 0.988 - - - - pleiotropic regulator 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2787]
98. pdpk1b ENSDARG00000018285 957 0.988 - - - - 0.988 - - - - 3-phosphoinositide dependent protein kinase 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1820]
99. st8sia6 ENSDARG00000021195 2244 0.988 - - - - 0.988 - - - - ST8 alpha-N-acetyl-neuraminide alpha-2,8-sialyltransferase 6 [Source:ZFIN;Acc:ZDB-GENE-060322-9]
100. hvcn1 ENSDARG00000040338 571 0.988 - - - - 0.988 - - - - hydrogen voltage-gated channel 1 [Source:ZFIN;Acc:ZDB-GENE-040718-36]

There are 1133 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA