Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmem56b

Gene Name Gene ID Reads Annotation
tmem56b ENSDARG00000098224 1524 transmembrane protein 56b [Source:ZFIN;Acc:ZDB-GENE-041010-90]










Genes with expression patterns similar to tmem56b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmem56b ENSDARG00000098224 1524 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein 56b [Source:ZFIN;Acc:ZDB-GENE-041010-90]
2. gpcpd1 ENSDARG00000016011 2563 2.395 - - - - - 0.708 0.781 0.906 - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
3. wu:fc34e06 1793 1.886 - - - - - 0.924 0.962 - - wu:fc34e06, transcript variant X10
4. cdk16_1 ENSDARG00000032072 2031 1.869 - - - - - - 0.933 0.936 - cyclin-dependent kinase 16 [Source:ZFIN;Acc:ZDB-GENE-030131-2939]
5. klc2 3058 1.842 - - - - - - 0.926 0.916 - kinesin light chain 2
6. sc:d173 sc:d173 1279 1.824 - - - - - 0.859 0.965 - -
7. mcl1a ENSDARG00000009779 2058 1.801 - - - - - 0.851 0.950 - - MCL1, BCL2 family apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-7]
8. mycbp2 ENSDARG00000001220, ENSDARG00000113355 3417 1.782 - - - - - - 0.909 0.873 - MYC binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030616-132]
9. purba ENSDARG00000068822 2537 1.761 - - - - - - 0.931 0.830 - purine-rich element binding protein Ba [Source:ZFIN;Acc:ZDB-GENE-060531-100]
10. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.757 - - - - - - 0.929 0.828 - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
11. ABI3_1 ABI3_1 511 1.744 - - - - - 0.772 0.972 - -
12. fa2h ENSDARG00000090063 1084 1.718 - 0.761 - - - - 0.957 - - fatty acid 2-hydroxylase [Source:ZFIN;Acc:ZDB-GENE-031219-4]
13. atl3 ENSDARG00000004270 2806 1.708 - - - - - 0.767 0.941 - - atlastin 3 [Source:ZFIN;Acc:ZDB-GENE-041010-109]
14. si:ch73-138n13.1 ENSDARG00000075349 4411 1.694 - 0.775 - - - - - 0.919 - si:ch73-138n13.1 [Source:ZFIN;Acc:ZDB-GENE-091204-448]
15. slc43a1a ENSDARG00000037393, ENSDARG00000113118 5797 1.692 - - - - - 0.735 0.957 - - solute carrier family 43 (amino acid system L transporter), member 1a [Source:ZFIN;Acc:ZDB-GENE-030131-6327]
16. scinlb ENSDARG00000058348 1466 1.691 - 0.729 - - - - 0.962 - - scinderin like b [Source:ZFIN;Acc:ZDB-GENE-040426-2068]
17. h6pd ENSDARG00000060153, ENSDARG00000114064 1927 1.69 - - - - - 0.727 0.963 - - hexose-6-phosphate dehydrogenase (glucose 1-dehydrogenase) [Source:ZFIN;Acc:ZDB-GENE-110408-60]
18. dcun1d1 ENSDARG00000099642 2043 1.687 - 0.769 - - - - - 0.918 - DCN1, defective in cullin neddylation 1, domain containing 1 (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-5443]
19. prkcda ENSDARG00000009208 1508 1.679 - - - - - 0.794 0.885 - - protein kinase C, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-6503]
20. C2H6orf52 C2H6orf52 2847 1.656 - - - - - 0.731 - 0.925 -
21. arpc4l ENSDARG00000058225 10107 1.654 - - - - - 0.768 0.886 - - actin related protein 2/3 complex, subunit 4, like [Source:ZFIN;Acc:ZDB-GENE-040808-18]
22. col14a1a ENSDARG00000005762 4778 1.652 - - - - - 0.707 0.945 - - collagen, type XIV, alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9889]
23. ubl3a ENSDARG00000099532, ENSDARG00000113955 3475 1.649 - 0.743 - - - - 0.906 - - ubiquitin-like 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3431]
24. ppm1g ENSDARG00000075559 6516 1.647 - - - - - - 0.837 0.810 - protein phosphatase, Mg2+/Mn2+ dependent, 1G [Source:ZFIN;Acc:ZDB-GENE-030425-4]
25. fermt1 ENSDARG00000052652 2394 1.644 - - - - - 0.750 0.894 - - fermitin family member 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3264]
26. pkp1b ENSDARG00000052705 1077 1.641 - - - - - 0.734 0.907 - - plakophilin 1b [Source:ZFIN;Acc:ZDB-GENE-030131-417]
27. psmd7 ENSDARG00000102417 4732 1.64 - - - - - 0.745 0.895 - - proteasome 26S subunit, non-ATPase 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5541]
28. acp1 ENSDARG00000076486 3275 1.624 - - - - - - 0.918 0.706 - acid phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-050327-12]
29. bet1 ENSDARG00000034885, ENSDARG00000113480 3627 1.619 0.754 - - - - - 0.865 - - Bet1 golgi vesicular membrane trafficking protein [Source:ZFIN;Acc:ZDB-GENE-040625-3]
30. acsf2 ENSDARG00000061201 4413 1.617 - - - - - - 0.913 0.704 - acyl-CoA synthetase family member 2 [Source:ZFIN;Acc:ZDB-GENE-060825-7]
31. arf5 ENSDARG00000070472, ENSDARG00000115687 12490 1.614 - - - - - 0.788 0.826 - - ADP-ribosylation factor 5 [Source:ZFIN;Acc:ZDB-GENE-030910-5]
32. atp6v1e1b ENSDARG00000030694 5452 1.599 - - - - - - 0.730 0.869 - ATPase H+ transporting V1 subunit E1b [Source:ZFIN;Acc:ZDB-GENE-020419-11]
33. emc6 ENSDARG00000035282 4981 1.576 - 0.711 - - - - 0.865 - - ER membrane protein complex subunit 6 [Source:ZFIN;Acc:ZDB-GENE-030131-9164]
34. cyp7c1 cyp7c1 1214 1.574 - 0.860 - - - 0.714 - - -
35. EML4_1 EML4_1 8736 1.572 - - - - - 0.737 0.835 - -
36. alox12 ENSDARG00000069463 5787 1.571 - - - - - 0.773 0.798 - - arachidonate 12-lipoxygenase [Source:ZFIN;Acc:ZDB-GENE-030131-1452]
37. sqrdl 1598 1.568 - 0.722 - - - 0.846 - - - sulfide quinone reductase-like (yeast), transcript variant X2
38. si:dkey-87o1.2 ENSDARG00000095796 6602 1.54 - - - - - 0.703 0.837 - - si:dkey-87o1.2 [Source:ZFIN;Acc:ZDB-GENE-110411-217]
39. APOB_1 APOB_1 2217 1.5 0.780 - - - - - 0.720 - -
40. tmem189 ENSDARG00000042732 4004 1.487 - - - - - 0.700 0.787 - - transmembrane protein 189 [Source:ZFIN;Acc:ZDB-GENE-041010-150]
41. b3gnt3.1 ENSDARG00000043482 1991 1.468 - 0.745 - - - 0.723 - - - UDP-GlcNAc:betaGal beta-1,3-N-acetylglucosaminyltransferase 3, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040625-129]
42. slc47a1 ENSDARG00000046012 1426 1.451 0.736 0.715 - - - - - - - solute carrier family 47 (multidrug and toxin extrusion), member 1 [Source:ZFIN;Acc:ZDB-GENE-050327-20]
43. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.421 - 0.702 - - - 0.719 - - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
44. CCDC64B CCDC64B 337 1.415 0.707 0.708 - - - - - - -
45. pold3 ENSDARG00000076169 694 0.983 - - - - - - - 0.983 - polymerase (DNA-directed), delta 3, accessory subunit [Source:ZFIN;Acc:ZDB-GENE-060512-59]
46. E2F1 ENSDARG00000103868 638 0.982 - - - - - - - 0.982 - E2F transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-131024-3]
47. fzd3b ENSDARG00000058692 627 0.982 - - - - - - - 0.982 - frizzled class receptor 3b [Source:ZFIN;Acc:ZDB-GENE-070122-1]
48. arih2 ENSDARG00000012848 7087 0.982 - - - - - - - 0.982 - ariadne homolog 2 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-2158]
49. msmo1 ENSDARG00000055876, ENSDARG00000110767, ENSDARG00000115922 195 0.982 - - - - - - - 0.982 - methylsterol monooxygenase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2670]
50. med20 ENSDARG00000046006 614 0.982 - - - - - - - 0.982 - mediator complex subunit 20 [Source:ZFIN;Acc:ZDB-GENE-040801-104]
51. ghitm 1443 0.982 - - - - - - - 0.982 - growth hormone inducible transmembrane protein
52. ezh1 ENSDARG00000037894 294 0.982 - - - - - - - 0.982 - enhancer of zeste 1 polycomb repressive complex 2 subunit [Source:ZFIN;Acc:ZDB-GENE-050114-1]
53. zgc:171727 ENSDARG00000105781 350 0.981 - - - - - - - 0.981 - zgc:171727 [Source:ZFIN;Acc:ZDB-GENE-071004-26]
54. ift20 ENSDARG00000040556 285 0.981 - - - - - - - 0.981 - intraflagellar transport 20 homolog (Chlamydomonas) [Source:ZFIN;Acc:ZDB-GENE-040614-2]
55. CABZ01038494.1 ENSDARG00000088258 908 0.981 - - - - - - - 0.981 - modulator of smoothened a [Source:NCBI gene;Acc:100535551]
56. BX322612.1 BX322612.1 236 0.981 - - - - - - - 0.981 -
57. THEM4 ENSDARG00000061621 364 0.981 - - - - - - - 0.981 - thioesterase superfamily member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-982]
58. SIPA1L3 ENSDARG00000061699 268 0.981 - - - - - - - 0.981 - signal-induced proliferation-associated 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-050420-109]
59. DEDD ENSDARG00000029783 530 0.98 - - - - - - - 0.980 - death effector domain containing [Source:ZFIN;Acc:ZDB-GENE-040718-386]
60. mapre3b ENSDARG00000102878 362 0.98 - - - - - - - 0.980 - microtubule-associated protein, RP/EB family, member 3b [Source:ZFIN;Acc:ZDB-GENE-040704-6]
61. xkr6 xkr6 286 0.98 - - - - - - - 0.980 -
62. sh3bp5a ENSDARG00000100529 642 0.98 - - - - - - - 0.980 - SH3-domain binding protein 5a (BTK-associated) [Source:ZFIN;Acc:ZDB-GENE-111111-2]
63. XKR7 ENSDARG00000026333 175 0.98 - - - - - - - 0.980 - XK, Kell blood group complex subunit-related family, member 7 [Source:ZFIN;Acc:ZDB-GENE-051113-336]
64. nup43 ENSDARG00000043884 794 0.98 - - - - - - - 0.980 - nucleoporin 43 [Source:ZFIN;Acc:ZDB-GENE-040426-2533]
65. chd5 ENSDARG00000105083 132 0.98 - - - - - - - 0.980 - chromodomain helicase DNA binding protein 5 [Source:ZFIN;Acc:ZDB-GENE-120314-2]
66. cetn2 ENSDARG00000101510 541 0.98 - - - - - - - 0.980 - centrin, EF-hand protein, 2 [Source:ZFIN;Acc:ZDB-GENE-091118-94]
67. celsr2 ENSDARG00000019726, ENSDARG00000094388 4002 0.98 - - - - - - - 0.980 - cadherin, EGF LAG seven-pass G-type receptor 2 [Source:ZFIN;Acc:ZDB-GENE-070122-2]
68. grna ENSDARG00000004954 189 0.98 - - - - - - - 0.980 - granulin a [Source:ZFIN;Acc:ZDB-GENE-030131-8434]
69. ZNF784_2 ZNF784_2 181 0.98 - - - - - - - 0.980 -
70. NEDD9 ENSDARG00000089878, ENSDARG00000116312 165 0.98 - - - - - - - 0.980 - neural precursor cell expressed, developmentally down-regulated 9 [Source:ZFIN;Acc:ZDB-GENE-061013-318]
71. tdp2b ENSDARG00000035954, ENSDARG00000109349 478 0.98 - - - - - - - 0.980 - tyrosyl-DNA phosphodiesterase 2b [Source:ZFIN;Acc:ZDB-GENE-050816-1]
72. map7d2b ENSDARG00000045316 702 0.98 - - - - - - - 0.980 - MAP7 domain containing 2b [Source:ZFIN;Acc:ZDB-GENE-091118-82]
73. lrrc4.2 ENSDARG00000003020 235 0.98 - - - - - - - 0.980 - leucine rich repeat containing 4.2 [Source:ZFIN;Acc:ZDB-GENE-030131-7997]
74. KIRREL3 ENSDARG00000115903 206 0.98 - - - - - - - 0.980 - kirre like nephrin family adhesion molecule 3 [Source:HGNC Symbol;Acc:HGNC:23204]
75. ppp1r8 ppp1r8 310 0.979 - - - - - - - 0.979 -
76. NUAK1_1 NUAK1_1 1782 0.979 - - - - - - 0.979 - -
77. anapc5 ENSDARG00000008461 434 0.979 - - - - - - - 0.979 - anaphase promoting complex subunit 5 [Source:ZFIN;Acc:ZDB-GENE-030131-1574]
78. dmtf1 ENSDARG00000025824, ENSDARG00000109819, ENSDARG00000110011 364 0.979 - - - - - - - 0.979 - cyclin D binding myb-like transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-040718-413]
79. eef1a1a ENSDARG00000039502 234 0.979 - - - - - - - 0.979 - eukaryotic translation elongation factor 1 alpha 1a [Source:ZFIN;Acc:ZDB-GENE-030131-8278]
80. wdr92 ENSDARG00000037334 329 0.979 - - - - - - - 0.979 - WD repeat domain 92 [Source:ZFIN;Acc:ZDB-GENE-050417-93]
81. sgsm3 ENSDARG00000019038 352 0.979 - - - - - - - 0.979 - small G protein signaling modulator 3 [Source:ZFIN;Acc:ZDB-GENE-040426-2635]
82. dok7 ENSDARG00000060236 364 0.979 - - - - - - - 0.979 - docking protein 7 [Source:ZFIN;Acc:ZDB-GENE-090312-103]
83. TTC28 ENSDARG00000114920 580 0.979 - - - - - - - 0.979 - tetratricopeptide repeat domain 28 [Source:HGNC Symbol;Acc:HGNC:29179]
84. hnrnpa0l_1 ENSDARG00000036161, ENSDARG00000076380, ENSDARG00000114889 553 0.979 - - - - - - - 0.979 - heterogeneous nuclear ribonucleoprotein A0, like [Source:ZFIN;Acc:ZDB-GENE-030131-618]
85. SBNO2 SBNO2 773 0.979 - - - - - - - 0.979 -
86. crb2a ENSDARG00000060106 1307 0.979 - - - - - - - 0.979 - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
87. CR354611.2 CR354611.2 2040 0.979 - - - - - - - 0.979 -
88. rapgef1a ENSDARG00000043593 416 0.979 - - - - - - - 0.979 - Rap guanine nucleotide exchange factor (GEF) 1a [Source:ZFIN;Acc:ZDB-GENE-081105-26]
89. ankrd10b ENSDARG00000004771 654 0.979 - - - - - - - 0.979 - ankyrin repeat domain 10b [Source:ZFIN;Acc:ZDB-GENE-061013-49]
90. GANAB_1 GANAB_1 685 0.978 - - - - - - - 0.978 -
91. CCDC50 ENSDARG00000105136 1695 0.978 - - - - - - - 0.978 - coiled-coil domain containing 50 [Source:ZFIN;Acc:ZDB-GENE-150115-1]
92. CABZ01073424.1 ENSDARG00000107858 688 0.978 - - - - - - - 0.978 -
93. PVRL4 1691 0.978 - - - - - - 0.978 - - poliovirus receptor-related 4
94. LTN1 ENSDARG00000003984 1076 0.978 - - - - - - - 0.978 - listerin E3 ubiquitin protein ligase 1 [Source:HGNC Symbol;Acc:HGNC:13082]
95. nkain4 ENSDARG00000062699 377 0.978 - - - - - - - 0.978 - sodium/potassium transporting ATPase interacting 4 [Source:ZFIN;Acc:ZDB-GENE-080204-60]
96. SB:CB827 SB:CB827 245 0.978 - - - - - - - 0.978 -
97. si:ch211-195b13.1 ENSDARG00000016623 427 0.978 - - - - - - - 0.978 - si:ch211-195b13.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7626]
98. psmd5 ENSDARG00000059046 622 0.977 - - - - - - - 0.977 - proteasome 26S subunit, non-ATPase 5 [Source:ZFIN;Acc:ZDB-GENE-050417-28]
99. bsk146 ENSDARG00000099069 274 0.977 - - - - - - - 0.977 - brain specific kinase 146 [Source:ZFIN;Acc:ZDB-GENE-060313-3]
100. RBM33 RBM33 1954 0.977 - - - - - - - 0.977 -

There are 1014 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA