Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmem55a

Gene Name Gene ID Reads Annotation
tmem55a 1331 transmembrane protein 55A










Genes with expression patterns similar to tmem55a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmem55a 1331 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein 55A
2. dlg5a ENSDARG00000074059 1834 2.582 0.917 - - - - - 0.742 0.923 - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
3. RNF5 ENSDARG00000075606 1730 1.94 0.970 - - - - - - 0.970 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
4. ptpn21 ENSDARG00000062248 2010 1.933 0.959 - - - - - - 0.974 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
5. si:dkey-238o13.4 ENSDARG00000078847 884 1.88 0.915 - - - - - - 0.965 - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
6. CASKIN2_1 CASKIN2_1 2299 1.864 0.876 - - - - - - 0.988 -
7. SCML2 ENSDARG00000012949 1310 1.818 0.926 - - - - - - 0.892 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
8. srp19 ENSDARG00000035699 2624 1.803 0.897 - - - - - - 0.906 - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
9. tmed7 ENSDARG00000046022 2435 1.761 0.858 - - - - - - 0.903 - transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
10. lrp5 ENSDARG00000006921 3522 1.748 - - - - - - 0.774 0.974 - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
11. pmpca ENSDARG00000102607 1024 1.742 - - - - - 0.763 - 0.979 - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
12. sestd1 ENSDARG00000040614 1014 1.739 - 0.880 - - - 0.859 - - - SEC14 and spectrin domains 1 [Source:ZFIN;Acc:ZDB-GENE-030801-1]
13. zgc:55764 zgc:55764 645 1.737 - 0.766 - - - - - 0.971 -
14. gpd1l ENSDARG00000040024 2182 1.737 - 0.780 - - - - - 0.957 - glycerol-3-phosphate dehydrogenase 1 like [Source:ZFIN;Acc:ZDB-GENE-041010-220]
15. sumo3b ENSDARG00000035993 3414 1.733 0.921 - - - - - - 0.812 - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
16. kidins220b ENSDARG00000017338 1937 1.732 - - - - - 0.745 - 0.987 - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
17. golga7 ENSDARG00000057676 4691 1.731 0.894 - - - - - - 0.837 - golgin A7 [Source:ZFIN;Acc:ZDB-GENE-040625-142]
18. mrpl11 ENSDARG00000013075 2927 1.73 0.766 - - - - - - 0.964 - mitochondrial ribosomal protein L11 [Source:ZFIN;Acc:ZDB-GENE-040718-294]
19. rdh14b ENSDARG00000002467 991 1.702 - 0.725 - - - - - 0.977 - retinol dehydrogenase 14b [Source:ZFIN;Acc:ZDB-GENE-030131-6605]
20. sf3b5 ENSDARG00000016855 4015 1.691 0.910 0.781 - - - - - - - splicing factor 3b, subunit 5 [Source:ZFIN;Acc:ZDB-GENE-040718-181]
21. phf10 ENSDARG00000070084 1210 1.691 - - - - - - 0.714 0.977 - PHD finger protein 10 [Source:ZFIN;Acc:ZDB-GENE-040426-1573]
22. lyrm4 ENSDARG00000078352 2245 1.688 0.918 0.770 - - - - - - - LYR motif containing 4 [Source:ZFIN;Acc:ZDB-GENE-081104-295]
23. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 1.679 0.773 - - - - - - 0.906 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
24. fam76b ENSDARG00000012432 2722 1.67 0.711 - - - - - - 0.959 - family with sequence similarity 76, member B [Source:ZFIN;Acc:ZDB-GENE-030131-6955]
25. CBFA2T3 ENSDARG00000079012 6799 1.665 0.930 - - - - - - 0.735 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
26. vta1 ENSDARG00000013732 6072 1.661 0.856 - - - - - - 0.805 - vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
27. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 1.656 0.741 - - - - - - 0.915 - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
28. lsm7 ENSDARG00000058328 7191 1.636 0.878 - - - - 0.758 - - - LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated [Source:ZFIN;Acc:ZDB-GENE-030131-8284]
29. yth2 yth2 3716 1.632 0.853 - - - - - 0.779 - -
30. aup1 ENSDARG00000092609 2431 1.629 0.925 - - - - 0.704 - - - ancient ubiquitous protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3375]
31. ing4 ENSDARG00000030716 5908 1.623 0.884 - - - - 0.739 - - - inhibitor of growth family, member 4 [Source:ZFIN;Acc:ZDB-GENE-050522-47]
32. fzd7b ENSDARG00000027589 2562 1.622 - 0.747 - - - - - 0.875 - frizzled class receptor 7b [Source:ZFIN;Acc:ZDB-GENE-990415-229]
33. krr1 ENSDARG00000011246 1624 1.614 0.906 0.708 - - - - - - - KRR1, small subunit (SSU) processome component, homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-060623-10]
34. TNRC6C_2 TNRC6C_2 2444 1.61 - - 0.707 - - - - 0.903 -
35. oxsr1a ENSDARG00000034189 4314 1.566 - - - - - - 0.736 0.830 - oxidative stress responsive 1a [Source:ZFIN;Acc:ZDB-GENE-070620-25]
36. baz1b ENSDARG00000102832, ENSDARG00000114866 3543 1.542 - - - - - - 0.710 0.832 - bromodomain adjacent to zinc finger domain, 1B [Source:ZFIN;Acc:ZDB-GENE-010328-16]
37. polr2k ENSDARG00000075616 2047 1.532 0.820 - - - - 0.712 - - - polymerase (RNA) II (DNA directed) polypeptide K [Source:ZFIN;Acc:ZDB-GENE-070820-18]
38. G3BP2_1 G3BP2_1 2390 1.51 0.738 - - - - - 0.772 - -
39. C3H19orf43 C3H19orf43 2961 1.446 - 0.729 - - - 0.717 - - -
40. ube3a ENSDARG00000055737 1874 1.434 - 0.718 - - - - 0.716 - - ubiquitin protein ligase E3A [Source:ZFIN;Acc:ZDB-GENE-041114-190]
41. krt1-19d ENSDARG00000023082 902 0.991 - - - - - - - 0.991 - keratin, type 1, gene 19d [Source:ZFIN;Acc:ZDB-GENE-060316-1]
42. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.99 - - - - - - - 0.990 - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
43. tceb1a 969 0.99 - - - - - - - 0.990 - transcription elongation factor B (SIII), polypeptide 1a, transcript variant X4
44. gpkow ENSDARG00000029612 1395 0.986 - - - - - - - 0.986 - G patch domain and KOW motifs [Source:ZFIN;Acc:ZDB-GENE-030616-159]
45. tmem88b ENSDARG00000069388 501 0.986 - - - - - - - 0.986 - transmembrane protein 88 b [Source:ZFIN;Acc:ZDB-GENE-060929-644]
46. atn1 ENSDARG00000092067 257 0.986 - - - - - - - 0.986 - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
47. brwd1 ENSDARG00000074747, ENSDARG00000111353 1008 0.986 - - - - - - - 0.986 - bromodomain and WD repeat domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041111-120]
48. bcl9 ENSDARG00000036687 1124 0.985 - - - - - - - 0.985 - B cell CLL/lymphoma 9 [Source:ZFIN;Acc:ZDB-GENE-090313-135]
49. ankrd37 ENSDARG00000056376 131 0.985 - - - - - - - 0.985 - ankyrin repeat domain 37 [Source:ZFIN;Acc:ZDB-GENE-070308-1]
50. cetn3 ENSDARG00000011825 1087 0.985 - - - - - - - 0.985 - centrin 3 [Source:ZFIN;Acc:ZDB-GENE-050522-152]
51. SIPA1 SIPA1 302 0.985 - - - - - - - 0.985 -
52. CABZ01087670.1 CABZ01087670.1 411 0.985 - - - - - - - 0.985 -
53. SYNDIG1 ENSDARG00000100751 165 0.985 - - - - - - - 0.985 - synapse differentiation inducing 1 [Source:HGNC Symbol;Acc:HGNC:15885]
54. abcb6b ENSDARG00000074254 600 0.985 - - - - - - - 0.985 - ATP-binding cassette, sub-family B (MDR/TAP), member 6b [Source:ZFIN;Acc:ZDB-GENE-070912-584]
55. C20H1orf198 C20H1orf198 246 0.984 - - - - - - - 0.984 -
56. lrrc24 ENSDARG00000101704 224 0.984 - - - - - - - 0.984 - leucine rich repeat containing 24 [Source:ZFIN;Acc:ZDB-GENE-060503-496]
57. map9 ENSDARG00000037276, ENSDARG00000115648 581 0.984 - - - - - - - 0.984 - microtubule-associated protein 9 [Source:ZFIN;Acc:ZDB-GENE-080225-36]
58. mul1b ENSDARG00000052527 431 0.984 - - - - - - - 0.984 - mitochondrial E3 ubiquitin protein ligase 1b [Source:ZFIN;Acc:ZDB-GENE-050208-236]
59. ZNF70_2 ZNF70_2 1866 0.984 - - - - - - - 0.984 -
60. mast4 1164 0.984 - - - - - - - 0.984 - microtubule associated serine/threonine kinase family member 4, transcript variant X6
61. fbxo11a ENSDARG00000061631, ENSDARG00000102294, ENSDARG00000112746 1129 0.984 - - - - - - - 0.984 - F-box protein 11a [Source:ZFIN;Acc:ZDB-GENE-061103-70]
62. sult4a1 ENSDARG00000101967 205 0.984 - - - - - - - 0.984 - sulfotransferase family 4A, member 1 [Source:ZFIN;Acc:ZDB-GENE-060421-2705]
63. atcaya ENSDARG00000071678 344 0.984 - - - - - - - 0.984 - ataxia, cerebellar, Cayman type a [Source:ZFIN;Acc:ZDB-GENE-070705-185]
64. atp6ap2 ENSDARG00000008735 5096 0.984 - - - - - - - 0.984 - ATPase H+ transporting accessory protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1960]
65. ptprz1b ENSDARG00000020871 435 0.984 - - - - - - - 0.984 - protein tyrosine phosphatase, receptor-type, Z polypeptide 1b [Source:ZFIN;Acc:ZDB-GENE-050506-100]
66. lig4 ENSDARG00000060620 369 0.983 - - - - - - - 0.983 - ligase IV, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-070820-10]
67. kif7 ENSDARG00000033099 971 0.983 - - - - - - - 0.983 - kinesin family member 7 [Source:ZFIN;Acc:ZDB-GENE-050307-1]
68. cks2 ENSDARG00000071410, ENSDARG00000116198 966 0.983 - - - - - - - 0.983 - CDC28 protein kinase regulatory subunit 2 [Source:ZFIN;Acc:ZDB-GENE-050208-508]
69. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.983 - - - - - - - 0.983 - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
70. slc29a4 ENSDARG00000059690 478 0.983 - - - - - - - 0.983 - solute carrier family 29 (equilibrative nucleoside transporter), member 4 [Source:ZFIN;Acc:ZDB-GENE-070112-1932]
71. hsd17b12b ENSDARG00000035872 631 0.983 - - - - - - - 0.983 - hydroxysteroid (17-beta) dehydrogenase 12b [Source:ZFIN;Acc:ZDB-GENE-030131-1346]
72. l3mbtl1a ENSDARG00000014828 119 0.983 - - - - - - - 0.983 - l(3)mbt-like 1a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090312-120]
73. si:dkey-117p18.2 si:dkey-117p18.2 104 0.983 - - - - - - - 0.983 -
74. tbl3 ENSDARG00000052344 1530 0.983 - - - - - - - 0.983 - transducin (beta)-like 3 [Source:ZFIN;Acc:ZDB-GENE-041114-104]
75. GPR101 ENSDARG00000039218 157 0.983 - - - - - - - 0.983 - G protein-coupled receptor 101 [Source:ZFIN;Acc:ZDB-GENE-070914-1]
76. ANO8 ANO8 380 0.983 - - - - - - - 0.983 -
77. onecutl ENSDARG00000040253 2143 0.983 - - - - - - - 0.983 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
78. cbll1 ENSDARG00000015222 995 0.983 - - - - - - - 0.983 - Cbl proto-oncogene-like 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-040426-691]
79. si:ch211-241n15.2 si:ch211-241n15.2 435 0.982 - - - - - - - 0.982 -
80. ftr15 122 0.982 - - - - - - - 0.982 - finTRIM family, member 15
81. PREB ENSDARG00000101602 626 0.982 - - - - - - - 0.982 - prolactin regulatory element binding [Source:ZFIN;Acc:ZDB-GENE-040718-385]
82. si:ch211-113p18.3 ENSDARG00000087835 377 0.982 - - - - - - - 0.982 - si:ch211-113p18.3 [Source:ZFIN;Acc:ZDB-GENE-030131-4983]
83. phc1 ENSDARG00000002971 924 0.982 - - - - - - - 0.982 - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
84. wu:fj13e08 1223 0.982 - - - - - - - 0.982 - wu:fj13e08
85. CDC42SE2 ENSDARG00000094577, ENSDARG00000113403 606 0.981 - - - - - - - 0.981 - CDC42 small effector 2 [Source:ZFIN;Acc:ZDB-GENE-080204-45]
86. GATC ENSDARG00000056855 551 0.981 - - - - - - - 0.981 - glutamyl-tRNA amidotransferase subunit C [Source:ZFIN;Acc:ZDB-GENE-060526-381]
87. CABZ01069006.1 CABZ01069006.1 363 0.981 - - - - - - - 0.981 -
88. prpf31 ENSDARG00000095904 526 0.981 - - - - - - - 0.981 - PRP31 pre-mRNA processing factor 31 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-040426-1561]
89. rbm4.1 ENSDARG00000036386 625 0.981 - - - - - - - 0.981 - RNA binding motif protein 4.1 [Source:ZFIN;Acc:ZDB-GENE-030131-3902]
90. DGKI 306 0.981 - - - - - - - 0.981 - diacylglycerol kinase, iota
91. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.981 - - - - - - - 0.981 - atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
92. kdm5bb ENSDARG00000003098 531 0.981 - - - - - - - 0.981 - lysine (K)-specific demethylase 5Bb [Source:ZFIN;Acc:ZDB-GENE-030424-1]
93. vps36 ENSDARG00000057021 636 0.98 - - - - - - - 0.980 - vacuolar protein sorting 36 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-7753]
94. scly ENSDARG00000073813 578 0.98 - - - - - - - 0.980 - selenocysteine lyase [Source:ZFIN;Acc:ZDB-GENE-080204-30]
95. smcr8a ENSDARG00000052818 559 0.98 - - - - - - - 0.980 - Smith-Magenis syndrome chromosome region, candidate 8a [Source:ZFIN;Acc:ZDB-GENE-071212-4]
96. ek1 ENSDARG00000020080 742 0.98 - - - - - - - 0.980 - eph-like kinase 1 [Source:ZFIN;Acc:ZDB-GENE-990415-58]
97. zgc:112962 ENSDARG00000069102 431 0.98 - - - - - - - 0.980 - zgc:112962 [Source:ZFIN;Acc:ZDB-GENE-050410-15]
98. eya4 ENSDARG00000012397, ENSDARG00000117039 887 0.98 - - - - - - - 0.980 - EYA transcriptional coactivator and phosphatase 4 [Source:ZFIN;Acc:ZDB-GENE-050327-93]
99. NAT16 ENSDARG00000086222 4682 0.98 - - - - - - - 0.980 - N-acetyltransferase 16 [Source:ZFIN;Acc:ZDB-GENE-030219-43]
100. arhgap1 ENSDARG00000024324 6904 0.979 - - - - - - - 0.979 - Rho GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-050417-305]

There are 924 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA