Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmem54

Gene Name Gene ID Reads Annotation
tmem54 tmem54 3










Genes with expression patterns similar to tmem54

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmem54 tmem54 3 3 - - - 1.000 1.000 - - - 1.000
2. zgc:153499 ENSDARG00000070166 8 1.771 - - - 1.000 0.771 - - - - zgc:153499 [Source:ZFIN;Acc:ZDB-GENE-060825-234]
3. CABZ01038329.1 CABZ01038329.1 8 1.642 - - - - 0.780 - - - 0.862
4. si:dkey-26i24.1 ENSDARG00000102673 4 1.589 - - - 0.856 0.733 - - - - si:dkey-26i24.1 [Source:ZFIN;Acc:ZDB-GENE-110913-88]
5. si:dkey-172k15.6 ENSDARG00000095717 0 1 - - - - 1.000 - - - - si:dkey-172k15.6 [Source:ZFIN;Acc:ZDB-GENE-121214-9]
6. BACE2 ENSDARG00000044781 2 1 - - - 1.000 - - - - - beta-secretase 2 [Source:ZFIN;Acc:ZDB-GENE-041010-68]
7. CT027754.1 CT027754.1 0 1 - - - - 1.000 - - - -
8. ENSDARG00000088389 ENSDARG00000088389 2 1 - - - - 1.000 - - - -
9. zgc:172131 ENSDARG00000076269 32 1 - - - - 1.000 - - - - zgc:172131 [Source:ZFIN;Acc:ZDB-GENE-080204-47]
10. CR356223.2_1 ENSDARG00000100655 1 1 - - - - 1.000 - - - -
11. PEBP4 ENSDARG00000107065 4 1 - - - 1.000 - - - - - phosphatidylethanolamine binding protein 4 [Source:HGNC Symbol;Acc:HGNC:28319]
12. cfhl4 ENSDARG00000102456, ENSDARG00000116951 16 1 - - - 1.000 - - - - - complement factor H like 4 [Source:ZFIN;Acc:ZDB-GENE-030131-251]
13. si:ch211-198e13.3 5 1 - - - - 1.000 - - - - si:ch211-198e13.3, transcript variant X1
14. CT027569.1 CT027569.1 5 1 - - - 1.000 - - - - -
15. CR352258.1 CR352258.1 3 1 - - - - 1.000 - - - -
16. si:ch73-27e22.2 ENSDARG00000092266 8 1 - - - - 1.000 - - - - si:ch73-27e22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-230]
17. taar20t ENSDARG00000095035 1 1 - - - - 1.000 - - - - trace amine associated receptor 20t [Source:ZFIN;Acc:ZDB-GENE-060414-18]
18. MMP25 MMP25 0 1 - - - - 1.000 - - - -
19. rbm22 ENSDARG00000010238 523 1 - - - - 1.000 - - - - RNA binding motif protein 22 [Source:ZFIN;Acc:ZDB-GENE-040426-2298]
20. zgc:172218 ENSDARG00000089869, ENSDARG00000110419 3 1 - - - 1.000 - - - - - zgc:172218 [Source:NCBI gene;Acc:793798]
21. si:ch211-282j17.7 1 1 - - - 1.000 - - - - - si:ch211-282j17.7
22. trim35-21 ENSDARG00000102303 7 1 - - - - 1.000 - - - - tripartite motif containing 35-21 [Source:ZFIN;Acc:ZDB-GENE-060503-673]
23. ssh1a ENSDARG00000056780 3 1 - - - - 1.000 - - - - slingshot protein phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-040724-201]
24. ftr55 ENSDARG00000009161 3 1 - - - - 1.000 - - - - finTRIM family, member 55 [Source:ZFIN;Acc:ZDB-GENE-070424-161]
25. sowahaa ENSDARG00000077861 3 1 - - - 1.000 - - - - - sosondowah ankyrin repeat domain family member Aa [Source:ZFIN;Acc:ZDB-GENE-100910-3]
26. nudt4b ENSDARG00000045878 10 1 - - - - 1.000 - - - - nudix (nucleoside diphosphate linked moiety X)-type motif 4b [Source:ZFIN;Acc:ZDB-GENE-040912-79]
27. sele ENSDARG00000009123 122 1 - - - - 1.000 - - - - selectin E [Source:ZFIN;Acc:ZDB-GENE-041014-221]
28. si:ch73-94f11.5 si:ch73-94f11.5 6 1 - - - - 1.000 - - - -
29. grm3 ENSDARG00000031712, ENSDARG00000110535 30 1 - - - - 1.000 - - - - glutamate receptor, metabotropic 3 [Source:ZFIN;Acc:ZDB-GENE-061009-13]
30. si:ch73-17k20.1 si:ch73-17k20.1 2 1 - - - - 1.000 - - - -
31. si:dkeyp-73d8.12 si:dkeyp-73d8.12 0 1 - - - - 1.000 - - - -
32. trpm3 ENSDARG00000039181 2 1 - - - - 1.000 - - - - transient receptor potential cation channel, subfamily M, member 3 [Source:ZFIN;Acc:ZDB-GENE-060531-95]
33. si:dkey-286j17.3 si:dkey-286j17.3 8 1 - - - - 1.000 - - - -
34. mlphb ENSDARG00000062481 14 1 - - - - 1.000 - - - - melanophilin b [Source:ZFIN;Acc:ZDB-GENE-070803-2]
35. si:ch211-120f16.3 si:ch211-120f16.3 0 1 - - - - 1.000 - - - -
36. CU633740.1 CU633740.1 8 1 - - - - 1.000 - - - -
37. CSF3 CSF3 4 1 - - - - 1.000 - - - -
38. BX546446.1 BX546446.1 0 1 - - - - 1.000 - - - -
39. si:dkey-252l8.1 si:dkey-252l8.1 2 1 - - - - 1.000 - - - -
40. NCAM2 ENSDARG00000098523 2 1 - - - 1.000 - - - - - neural cell adhesion molecule 2 [Source:HGNC Symbol;Acc:HGNC:7657]
41. U1_16 U1_16 0 1 - - - - 1.000 - - - -
42. BX842593.1 BX842593.1 0 1 - - - - 1.000 - - - -
43. cpdb ENSDARG00000053877 5 1 - - - - 1.000 - - - - carboxypeptidase D, b [Source:ZFIN;Acc:ZDB-GENE-060929-1270]
44. edn3b ENSDARG00000086669 8 1 - - - - 1.000 - - - - endothelin 3b [Source:ZFIN;Acc:ZDB-GENE-090313-235]
45. gtf2f2b ENSDARG00000006816 1 1 - - - - 1.000 - - - - general transcription factor IIF, polypeptide 2b [Source:ZFIN;Acc:ZDB-GENE-050417-374]
46. U6_10 U6_10 0 1 - - - - 1.000 - - - -
47. si:ch211-86k6.3 si:ch211-86k6.3 1 1 - - - - 1.000 - - - -
48. si:ch211-202h22.9 ENSDARG00000079980 2 1 - - - - 1.000 - - - - si:ch211-202h22.9 [Source:ZFIN;Acc:ZDB-GENE-030131-1143]
49. si:dkey-9p20.24 si:dkey-9p20.24 4 1 - - - 1.000 - - - - -
50. slc5a5 ENSDARG00000005392 6 1 - - - - 1.000 - - - - solute carrier family 5 (sodium/iodide cotransporter), member 5 [Source:ZFIN;Acc:ZDB-GENE-060503-585]
51. CABZ01030889.1 CABZ01030889.1 4 1 - - - - 1.000 - - - -
52. si:ch211-171h4.5 ENSDARG00000077337 3 1 - - - - 1.000 - - - - si:ch211-171h4.5 [Source:ZFIN;Acc:ZDB-GENE-081104-151]
53. si:ch211-149k23.10 si:ch211-149k23.10 10 1 - - - - 1.000 - - - -
54. ENSDARG00000037617 ENSDARG00000037617 1 1 - - - - 1.000 - - - -
55. ccdc24 ENSDARG00000038793 7 1 - - - - 1.000 - - - - coiled-coil domain containing 24 [Source:ZFIN;Acc:ZDB-GENE-050327-18]
56. SNORD15 SNORD15 0 1 - - - - 1.000 - - - -
57. CR388160.3 CR388160.3 0 1 - - - - 1.000 - - - -
58. rpz3 ENSDARG00000069728 11 1 - - - 1.000 - - - - - rapunzel 3 [Source:ZFIN;Acc:ZDB-GENE-030131-4784]
59. sema4ga ENSDARG00000076595 24 1 - - - 1.000 - - - - - sema domain, immunoglobulin domain (Ig), transmembrane domain (TM) and short cytoplasmic domain, (semaphorin) 4Ga [Source:ZFIN;Acc:ZDB-GENE-060503-381]
60. fgfr1b ENSDARG00000011190 10 1 - - - - 1.000 - - - - fibroblast growth factor receptor 1b [Source:ZFIN;Acc:ZDB-GENE-060503-14]
61. SH3TC1 ENSDARG00000077330 8 1 - - - - 1.000 - - - - SH3 domain and tetratricopeptide repeats 1 [Source:HGNC Symbol;Acc:HGNC:26009]
62. GPC6_1 GPC6_1 34 1 - - - - 1.000 - - - -
63. si:dkey-111k7.3 si:dkey-111k7.3 0 1 - - - - 1.000 - - - -
64. CR381673.3 CR381673.3 4 1 - - - - 1.000 - - - -
65. Metazoa_SRP_5 Metazoa_SRP_5 2 1 - - - - 1.000 - - - -
66. si:ch73-303g23.4 si:ch73-303g23.4 386 1 - - - 1.000 - - - - -
67. Telomerase-vert Telomerase-vert 8 1 - - - - 1.000 - - - -
68. si:dkey-287i17.5 si:dkey-287i17.5 5 1 - - - 1.000 - - - - -
69. cd247l ENSDARG00000077240 25 1 - - - - 1.000 - - - - CD247 antigen like [Source:ZFIN;Acc:ZDB-GENE-070508-2]
70. guk1b ENSDARG00000005776 23 1 - - - - 1.000 - - - - guanylate kinase 1b [Source:ZFIN;Acc:ZDB-GENE-020916-1]
71. btr27 btr27 0 1 - - - - 1.000 - - - -
72. oacyl ENSDARG00000075191 351 1 - - - - 1.000 - - - - O-acyltransferase like [Source:ZFIN;Acc:ZDB-GENE-090710-2]
73. bbs1 ENSDARG00000075169, ENSDARG00000114301 7 1 - - - - 1.000 - - - - Bardet-Biedl syndrome 1 [Source:ZFIN;Acc:ZDB-GENE-060126-1]
74. zgc:173443 ENSDARG00000034403 26 1 - - - - 1.000 - - - - zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
75. ccr6a ENSDARG00000087474 10 1 - - - - 1.000 - - - - chemokine (C-C motif) receptor 6a [Source:ZFIN;Acc:ZDB-GENE-040625-126]
76. sh3bp1 ENSDARG00000078119 5 1 - - - 1.000 - - - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
77. hp ENSDARG00000051890, ENSDARG00000095807 4 1 - - - - 1.000 - - - - haptoglobin [Source:ZFIN;Acc:ZDB-GENE-030131-1259]
78. CMA1_6 CMA1_6 2 1 - - - - 1.000 - - - -
79. CABZ01066695.1 CABZ01066695.1 12 1 - - - 1.000 - - - - -
80. pcdh2g16 1 1 - - - - 1.000 - - - - protocadherin 2 gamma 16
81. MYO15B ENSDARG00000074852 6 1 - - - 1.000 - - - - - myosin XVB [Source:ZFIN;Acc:ZDB-GENE-030131-4797]
82. CU207301.11 CU207301.11 1 1 - - - 1.000 - - - - -
83. si:dkeyp-35e5.5 ENSDARG00000104026 3 1 - - - - 1.000 - - - - si:dkeyp-35e5.5 [Source:ZFIN;Acc:ZDB-GENE-050420-335]
84. glis1b ENSDARG00000027933 14 1 - - - - 1.000 - - - - GLIS family zinc finger 1b [Source:ZFIN;Acc:ZDB-GENE-081105-172]
85. si:ch211-165f21.1 si:ch211-165f21.1 1 1 - - - 1.000 - - - - -
86. Mar-11 Mar-11 5 1 - - - - 1.000 - - - -
87. trim108 ENSDARG00000061762, ENSDARG00000114698 5 1 - - - - 1.000 - - - - tripartite motif containing 108 [Source:ZFIN;Acc:ZDB-GENE-060503-670]
88. si:dkey-206f10.5 si:dkey-206f10.5 1 1 - - - - 1.000 - - - -
89. tmem196b ENSDARG00000090140 20 1 - - - 1.000 - - - - - transmembrane protein 196b [Source:ZFIN;Acc:ZDB-GENE-110914-248]
90. sagb ENSDARG00000038378 28 1 - - - - 1.000 - - - - S-antigen; retina and pineal gland (arrestin) b [Source:ZFIN;Acc:ZDB-GENE-050913-98]
91. CABZ01058422.1 CABZ01058422.1 0 1 - - - - 1.000 - - - -
92. si:dkey-231k6.6 si:dkey-231k6.6 2 1 - - - - 1.000 - - - -
93. CABZ01029902.1 CABZ01029902.1 0 1 - - - - 1.000 - - - -
94. Vault_1 Vault_1 6 1 - - - - 1.000 - - - -
95. zgc:171887 ENSDARG00000058791 0 1 - - - - 1.000 - - - - zgc:171887 [Source:ZFIN;Acc:ZDB-GENE-080220-39]
96. si:dkey-30c15.9 si:dkey-30c15.9 4 1 - - - 1.000 - - - - -
97. si:dkey-72l14.7 si:dkey-72l14.7 3 1 - - - 1.000 - - - - -
98. si:ch211-113a14.14 si:ch211-113a14.14 3 1 - - - - 1.000 - - - -
99. pth2 ENSDARG00000022951 7 1 - - - - 1.000 - - - - parathyroid hormone 2 [Source:ZFIN;Acc:ZDB-GENE-041102-1]
100. BX248410.2 ENSDARG00000090277 4 1 - - - 1.000 - - - - - sialic acid-binding Ig-like lectin 7 [Source:NCBI gene;Acc:103910452]

There are 219 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA