Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmem39a

Gene Name Gene ID Reads Annotation
tmem39a ENSDARG00000102746 900 transmembrane protein 39A [Source:ZFIN;Acc:ZDB-GENE-030131-1928]










Genes with expression patterns similar to tmem39a

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmem39a ENSDARG00000102746 900 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein 39A [Source:ZFIN;Acc:ZDB-GENE-030131-1928]
2. sod3b ENSDARG00000079183 39 2.112 - 0.704 - - - 0.705 0.703 - - superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
3. tmem206 ENSDARG00000012271 508 1.638 - 0.847 - - - 0.791 - - - transmembrane protein 206 [Source:ZFIN;Acc:ZDB-GENE-040426-1173]
4. rbm25 rbm25 3629 1.583 - 0.782 - - - - 0.801 - -
5. si:ch73-96b22.1 si:ch73-96b22.1 393 1.576 - 0.781 - - - - 0.795 - -
6. igf1ra ENSDARG00000027423, ENSDARG00000113936, ENSDARG00000116846 2228 1.555 - 0.811 - 0.744 - - - - - insulin-like growth factor 1a receptor [Source:ZFIN;Acc:ZDB-GENE-020503-1]
7. casp9 ENSDARG00000004325 306 1.551 - 0.809 - - - 0.742 - - - caspase 9, apoptosis-related cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-030825-5]
8. MPRIP_1 ENSDARG00000105209 898 1.542 - - - - - 0.742 0.800 - - myosin phosphatase Rho interacting protein [Source:HGNC Symbol;Acc:HGNC:30321]
9. CNOT4_1 CNOT4_1 697 1.539 - - - - - 0.712 0.827 - -
10. snx9b ENSDARG00000069302, ENSDARG00000116107 5673 1.537 - 0.777 - - - 0.760 - - - sorting nexin 9b [Source:ZFIN;Acc:ZDB-GENE-031118-50]
11. efna3b ENSDARG00000098295 319 1.531 - 0.818 - 0.713 - - - - - ephrin-A3b [Source:ZFIN;Acc:ZDB-GENE-011108-1]
12. atad5a ENSDARG00000070568 1840 1.529 - 0.717 - - - 0.812 - - - ATPase family, AAA domain containing 5a [Source:ZFIN;Acc:ZDB-GENE-070912-20]
13. stag2a ENSDARG00000011783 1588 1.528 - 0.760 - - - 0.768 - - - stromal antigen 2a [Source:ZFIN;Acc:ZDB-GENE-030131-3432]
14. cldn11b ENSDARG00000030723 863 1.526 0.707 0.819 - - - - - - - claudin 11b [Source:ZFIN;Acc:ZDB-GENE-010328-13]
15. cldnk ENSDARG00000042357 103 1.524 - 0.712 - - - 0.812 - - - claudin k [Source:ZFIN;Acc:ZDB-GENE-040801-201]
16. chp2 ENSDARG00000025788, ENSDARG00000113942 460 1.517 - - - - - 0.781 0.736 - - calcineurin-like EF-hand protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-5810]
17. afap1l2 ENSDARG00000074806 367 1.515 - 0.701 - - - - 0.814 - - actin filament associated protein 1-like 2 [Source:ZFIN;Acc:ZDB-GENE-100318-1]
18. fam65a 731 1.513 - 0.788 - - - 0.725 - - - family with sequence similarity 65, member A, transcript variant X5
19. pygl ENSDARG00000002197 192 1.513 - 0.750 - - 0.763 - - - - phosphorylase, glycogen, liver [Source:ZFIN;Acc:ZDB-GENE-041205-1]
20. skiv2l2 760 1.509 0.803 - - 0.706 - - - - - superkiller viralicidic activity 2-like 2
21. ubxn7 ENSDARG00000009436 652 1.507 - - - - - 0.767 0.740 - - UBX domain protein 7 [Source:ZFIN;Acc:ZDB-GENE-040704-8]
22. zgc:194469 ENSDARG00000104367 93 1.499 - 0.762 - - 0.737 - - - - zgc:194469 [Source:ZFIN;Acc:ZDB-GENE-081022-114]
23. arhgef28 ENSDARG00000060415 142 1.498 - - - - - 0.795 0.703 - - Rho guanine nucleotide exchange factor (GEF) 28 [Source:ZFIN;Acc:ZDB-GENE-060531-28]
24. slc9a8 ENSDARG00000020699 206 1.494 - 0.775 - - 0.719 - - - - solute carrier family 9, subfamily A (NHE8, cation proton antiporter 8), member 8 [Source:ZFIN;Acc:ZDB-GENE-041212-7]
25. tfap4 ENSDARG00000103923 2203 1.487 - - - 0.716 - - 0.771 - - transcription factor AP-4 (activating enhancer binding protein 4) [Source:ZFIN;Acc:ZDB-GENE-090810-1]
26. ncoa6 ENSDARG00000071272 759 1.481 - 0.709 - - - 0.772 - - - nuclear receptor coactivator 6 [Source:ZFIN;Acc:ZDB-GENE-080403-12]
27. MCOLN3_1 MCOLN3_1 192 1.476 - 0.768 - - - 0.708 - - -
28. c1qtnf5 ENSDARG00000056134 729 1.476 - 0.755 - - - 0.721 - - - C1q and TNF related 5 [Source:ZFIN;Acc:ZDB-GENE-050706-101]
29. BX005175.1 ENSDARG00000112442 441 1.475 - 0.762 - - - 0.713 - - - protein kinase C, delta b [Source:NCBI gene;Acc:100150844]
30. ube2t ENSDARG00000063285 716 1.471 - 0.747 - - - - 0.724 - - ubiquitin-conjugating enzyme E2T (putative) [Source:ZFIN;Acc:ZDB-GENE-061013-547]
31. shisa2 856 1.471 - 0.700 - - - 0.771 - - - shisa family member 2, transcript variant X2
32. si:dkey-15h8.12 si:dkey-15h8.12 206 1.466 - 0.736 - - - - 0.730 - -
33. ACOT12 ENSDARG00000054534 61 1.465 - 0.704 - - - 0.761 - - - acyl-CoA thioesterase 12 [Source:HGNC Symbol;Acc:HGNC:24436]
34. zgc:162358 zgc:162358 104 1.465 0.710 - - - - 0.755 - - -
35. C25HXorf38 C25HXorf38 516 1.449 - 0.704 - - 0.745 - - - -
36. gbp1 ENSDARG00000038668 520 1.425 - 0.711 - - - 0.714 - - - guanylate binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-040718-32]
37. bach1 bach1 1121 1.424 - 0.714 - - - 0.710 - - -
38. si:ch1073-228j22.1 ENSDARG00000095799 98 1.422 - - - - - 0.707 0.715 - - si:ch1073-228j22.1 [Source:ZFIN;Acc:ZDB-GENE-110411-219]
39. gdap1 ENSDARG00000058601 89 1.416 - 0.705 - - - 0.711 - - - ganglioside induced differentiation associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-050522-424]
40. acvrl1 ENSDARG00000018179 308 1.411 - 0.711 - - - 0.700 - - - activin A receptor like type 1 [Source:ZFIN;Acc:ZDB-GENE-021003-1]
41. nup88 ENSDARG00000003235, ENSDARG00000111135 1114 1.406 0.701 0.705 - - - - - - - nucleoporin 88 [Source:ZFIN;Acc:ZDB-GENE-050522-297]
42. zer1 ENSDARG00000105123 682 0.911 - 0.911 - - - - - - - zyg-11 related, cell cycle regulator [Source:ZFIN;Acc:ZDB-GENE-040426-2307]
43. si:dkeyp-33e11.3 si:dkeyp-33e11.3 306 0.901 - 0.901 - - - - - - -
44. becn1 ENSDARG00000079128 581 0.897 - 0.897 - - - - - - - beclin 1, autophagy related [Source:ZFIN;Acc:ZDB-GENE-040426-1666]
45. psmf1 ENSDARG00000022652 527 0.896 - 0.896 - - - - - - - proteasome inhibitor subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040718-282]
46. CIT CIT 212 0.896 - - - - - - 0.896 - -
47. si:dkey-17e16.17 615 0.895 - 0.895 - - - - - - - si:dkey-17e16.17
48. stk38l ENSDARG00000045482 266 0.893 - - - - - 0.893 - - - serine/threonine kinase 38 like [Source:ZFIN;Acc:ZDB-GENE-040426-798]
49. ISM2 ISM2 1710 0.891 - 0.891 - - - - - - -
50. cadps2 ENSDARG00000013312, ENSDARG00000117190 144 0.891 - 0.891 - - - - - - - Ca++-dependent secretion activator 2 [Source:ZFIN;Acc:ZDB-GENE-030903-1]
51. ppardb ENSDARG00000009473 1601 0.89 - 0.890 - - - - - - - peroxisome proliferator-activated receptor delta b [Source:ZFIN;Acc:ZDB-GENE-000112-47]
52. cdca8 ENSDARG00000043137 7541 0.886 - - - - - 0.886 - - - cell division cycle associated 8 [Source:ZFIN;Acc:ZDB-GENE-041114-171]
53. srsf1b ENSDARG00000017843 2760 0.883 - 0.883 - - - - - - - serine/arginine-rich splicing factor 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1467]
54. med14 ENSDARG00000009953 1383 0.871 - 0.871 - - - - - - - mediator complex subunit 14 [Source:ZFIN;Acc:ZDB-GENE-030131-8867]
55. dpm2 ENSDARG00000095623, ENSDARG00000115283 981 0.868 - 0.868 - - - - - - - dolichyl-phosphate mannosyltransferase polypeptide 2, regulatory subunit [Source:ZFIN;Acc:ZDB-GENE-030131-9093]
56. adamts15a ENSDARG00000029124, ENSDARG00000111736 68 0.867 - 0.867 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 15a [Source:ZFIN;Acc:ZDB-GENE-060526-203]
57. cox11 ENSDARG00000061004, ENSDARG00000115002 423 0.864 - - - - - - 0.864 - - cytochrome c oxidase assembly homolog 11 (yeast) [Source:ZFIN;Acc:ZDB-GENE-050506-82]
58. c6 ENSDARG00000057113, ENSDARG00000093052, ENSDARG00000115290 612 0.862 - 0.862 - - - - - - - complement component 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1358]
59. GTSF1L GTSF1L 2089 0.861 - - - - - 0.861 - - -
60. VMA21 ENSDARG00000093945, ENSDARG00000113532 7555 0.861 - - - - - 0.861 - - - VMA21 vacuolar H+-ATPase homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-081104-272]
61. rad23b ENSDARG00000021550 2575 0.86 - 0.860 - - - - - - - RAD23 homolog B, nucleotide excision repair protein [Source:ZFIN;Acc:ZDB-GENE-040426-1487]
62. mych ENSDARG00000077473 911 0.856 - 0.856 - - - - - - - myelocytomatosis oncogene homolog [Source:ZFIN;Acc:ZDB-GENE-030219-51]
63. clcn5 clcn5 492 0.855 - - - - - 0.855 - - -
64. wnt10a ENSDARG00000017155 491 0.855 - - - - - 0.855 - - - wingless-type MMTV integration site family, member 10a [Source:ZFIN;Acc:ZDB-GENE-990415-278]
65. rabggtb ENSDARG00000068587 1935 0.854 - - - - - 0.854 - - - Rab geranylgeranyltransferase subunit beta [Source:ZFIN;Acc:ZDB-GENE-040426-2116]
66. ptprfa ENSDARG00000103479 1250 0.854 - - - - - 0.854 - - - protein tyrosine phosphatase, receptor type, f, a [Source:ZFIN;Acc:ZDB-GENE-020107-2]
67. SLC44A2 ENSDARG00000037059 88 0.853 - 0.853 - - - - - - - solute carrier family 44 (choline transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-030131-3065]
68. mgat5 ENSDARG00000071506 324 0.852 - 0.852 - - - - - - - alpha-1,6-mannosylglycoprotein 6-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-060616-238]
69. fam49bb ENSDARG00000045417 513 0.852 - 0.852 - - - - - - - family with sequence similarity 49, member Bb [Source:ZFIN;Acc:ZDB-GENE-040426-2590]
70. CABZ01066772.1 CABZ01066772.1 299 0.85 - - - - - 0.850 - - -
71. CLCN4 ENSDARG00000035808 397 0.85 0.850 - - - - - - - - chloride channel, voltage-sensitive 4 [Source:ZFIN;Acc:ZDB-GENE-061013-353]
72. SLC5A6 SLC5A6 179 0.848 - 0.848 - - - - - - -
73. arhgap27 ENSDARG00000104255 439 0.848 - 0.848 - - - - - - - Rho GTPase activating protein 27 [Source:ZFIN;Acc:ZDB-GENE-030131-3922]
74. si:ch211-215d8.2 ENSDARG00000093233 784 0.847 - - - - - 0.847 - - - si:ch211-215d8.2 [Source:ZFIN;Acc:ZDB-GENE-050419-248]
75. psen2 ENSDARG00000015540 832 0.847 - - - - - 0.847 - - - presenilin 2 [Source:ZFIN;Acc:ZDB-GENE-000330-9]
76. Mar-06 Mar-06 953 0.847 - - - - - 0.847 - - -
77. dnajc15 ENSDARG00000038309 1274 0.846 - - - - - - 0.846 - - DnaJ (Hsp40) homolog, subfamily C, member 15 [Source:ZFIN;Acc:ZDB-GENE-040801-216]
78. ADAMTS16 ENSDARG00000074646 277 0.845 - 0.845 - - - - - - - ADAM metallopeptidase with thrombospondin type 1 motif, 16 [Source:ZFIN;Acc:ZDB-GENE-130530-760]
79. si:dkey-193c22.2 ENSDARG00000076735 2791 0.845 - 0.845 - - - - - - - si:dkey-193c22.2 [Source:ZFIN;Acc:ZDB-GENE-070705-337]
80. asnsd1 830 0.844 - 0.844 - - - - - - - asparagine synthetase domain containing 1, transcript variant X1
81. atp6v1f ENSDARG00000045543 3445 0.844 - - - - - 0.844 - - - ATPase H+ transporting V1 subunit F [Source:ZFIN;Acc:ZDB-GENE-040718-259]
82. STAC ENSDARG00000074004 83 0.843 - - - - - 0.843 - - - SH3 and cysteine rich domain [Source:ZFIN;Acc:ZDB-GENE-131121-459]
83. fbxl15 ENSDARG00000005284 213 0.843 - - - - - - 0.843 - - F-box and leucine-rich repeat protein 15 [Source:ZFIN;Acc:ZDB-GENE-040426-2440]
84. wu:fj30f06 480 0.843 - 0.843 - - - - - - - wu:fj30f06, transcript variant X1
85. C3_1 C3_1 637 0.843 - - - - - 0.843 - - -
86. appl1 1019 0.842 - - - - - 0.842 - - - adaptor protein, phosphotyrosine interaction, PH domain and leucine zipper containing 1, transcript variant X1
87. CR382385.2 ENSDARG00000115992 353 0.842 - 0.842 - - - - - - -
88. pnpla8 ENSDARG00000078745 326 0.841 - 0.841 - - - - - - - patatin-like phospholipase domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-070705-553]
89. CABZ01048956.1 ENSDARG00000117474 253 0.841 - 0.841 - - - - - - - probable GPI-anchored adhesin-like protein PGA18 [Source:NCBI gene;Acc:108191751]
90. slc50a1 ENSDARG00000015158 329 0.84 - - - - - 0.840 - - - solute carrier family 50 (sugar efflux transporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-050220-11]
91. zdhhc17 ENSDARG00000070441 1073 0.84 0.840 - - - - - - - - zinc finger, DHHC-type containing 17 [Source:ZFIN;Acc:ZDB-GENE-070424-194]
92. grnb ENSDARG00000025081 716 0.839 - - - - - 0.839 - - - granulin b [Source:ZFIN;Acc:ZDB-GENE-030131-7393]
93. arhgef7b ENSDARG00000073848 1249 0.838 - - - - - 0.838 - - - Rho guanine nucleotide exchange factor (GEF) 7b [Source:ZFIN;Acc:ZDB-GENE-041212-49]
94. fam222ba ENSDARG00000059886 1648 0.837 - - - - - 0.837 - - - family with sequence similarity 222, member Ba [Source:ZFIN;Acc:ZDB-GENE-060526-355]
95. pex14 ENSDARG00000028322 1087 0.837 - - - - - 0.837 - - - peroxisomal biogenesis factor 14 [Source:ZFIN;Acc:ZDB-GENE-060130-169]
96. smarcb1b ENSDARG00000011594 2413 0.837 - 0.837 - - - - - - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily b, member 1b [Source:ZFIN;Acc:ZDB-GENE-991008-16]
97. rhbdd2 ENSDARG00000092463 937 0.837 - 0.837 - - - - - - - rhomboid domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-091204-359]
98. CCDC57_1 CCDC57_1 35 0.834 - 0.834 - - - - - - -
99. arrdc2 ENSDARG00000020761 621 0.834 - 0.834 - - - - - - - arrestin domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7146]
100. trim44 ENSDARG00000051761 509 0.833 - 0.833 - - - - - - - tripartite motif containing 44 [Source:ZFIN;Acc:ZDB-GENE-050522-37]

There are 1146 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA