Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmem248

Gene Name Gene ID Reads Annotation
tmem248 ENSDARG00000018825 1560 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]










Genes with expression patterns similar to tmem248

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmem248 ENSDARG00000018825 1560 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein 248 [Source:ZFIN;Acc:ZDB-GENE-050320-103]
2. pabpn1 ENSDARG00000045373 4876 2.545 - - 0.875 - - - 0.798 - 0.872 poly(A) binding protein, nuclear 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2401]
3. eif4e3 ENSDARG00000005078 1624 2.506 - 0.721 0.982 - - - - - 0.803 eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
4. b4galt6 ENSDARG00000010301 2005 2.363 - 0.862 - - - - 0.737 - 0.764 UDP-Gal:betaGlcNAc beta 1,4- galactosyltransferase, polypeptide 6 [Source:ZFIN;Acc:ZDB-GENE-040426-789]
5. NUMA1_2 NUMA1_2 2897 2.289 - - - - - 0.715 0.704 - 0.870
6. cln6a ENSDARG00000077584 1090 1.873 - - 0.991 - - - 0.882 - - CLN6, transmembrane ER protein a [Source:ZFIN;Acc:ZDB-GENE-041010-57]
7. olig2 ENSDARG00000040946 1405 1.849 - - 0.979 - - - - - 0.870 oligodendrocyte lineage transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4013]
8. anapc11 ENSDARG00000102531, ENSDARG00000116987 1769 1.832 - - 0.983 - - - - - 0.849 APC11 anaphase promoting complex subunit 11 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-061013-383]
9. pdzrn3b ENSDARG00000073869 1566 1.832 - - 0.989 - - - - - 0.843 PDZ domain containing RING finger 3b [Source:ZFIN;Acc:ZDB-GENE-071022-4]
10. paxip1 ENSDARG00000005606 1417 1.815 - - 0.986 - - - - - 0.829 PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
11. samm50l ENSDARG00000039681 2465 1.815 - - 0.969 - - - - - 0.846 sorting and assembly machinery component 50 homolog, like [Source:ZFIN;Acc:ZDB-GENE-041114-30]
12. tjp1a ENSDARG00000077506 2658 1.809 - - 0.983 - - - 0.826 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
13. arid1b ENSDARG00000092503 1376 1.808 - - 0.987 - - - - - 0.821 AT rich interactive domain 1B (SWI1-like) [Source:ZFIN;Acc:ZDB-GENE-030131-4459]
14. nploc4 ENSDARG00000100487 1262 1.795 - - 0.985 - - - - - 0.810 NPL4 homolog, ubiquitin recognition factor [Source:ZFIN;Acc:ZDB-GENE-030131-5658]
15. ZNF618 ENSDARG00000071469 2347 1.794 - 0.828 0.966 - - - - - - zinc finger protein 618 [Source:ZFIN;Acc:ZDB-GENE-030131-2063]
16. gdi1 ENSDARG00000056122 4106 1.788 - - 0.971 - - - - - 0.817 GDP dissociation inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-050522-504]
17. phc2b_1 ENSDARG00000013224 1316 1.785 - - 0.990 - - - - - 0.795 polyhomeotic homolog 2b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-040426-1113]
18. crb2a ENSDARG00000060106 1307 1.771 - 0.785 0.986 - - - - - - crumbs family member 2a [Source:ZFIN;Acc:ZDB-GENE-060612-1]
19. hmg20b ENSDARG00000042045, ENSDARG00000116536 2638 1.771 - 0.781 0.990 - - - - - - high mobility group 20B [Source:ZFIN;Acc:ZDB-GENE-030131-4258]
20. sash1a ENSDARG00000007179 2497 1.763 - - 0.974 - - - 0.789 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
21. mcts1 ENSDARG00000025972 4662 1.759 - - 0.935 - - - - - 0.824 malignant T cell amplified sequence 1 [Source:ZFIN;Acc:ZDB-GENE-040426-957]
22. KRT18 ENSDARG00000018404, ENSDARG00000109528 6022 1.759 - - 0.967 - - - - - 0.792 keratin 18 [Source:ZFIN;Acc:ZDB-GENE-030411-6]
23. si:ch211-238e22.1 si:ch211-238e22.1 1032 1.728 - 0.745 0.983 - - - - - -
24. cenpf ENSDARG00000055133 5267 1.728 - 0.756 0.972 - - - - - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
25. gins4 ENSDARG00000016044 671 1.722 - 0.732 0.990 - - - - - - GINS complex subunit 4 (Sld5 homolog) [Source:ZFIN;Acc:ZDB-GENE-040801-59]
26. pbxip1b ENSDARG00000011824 3726 1.72 - - 0.891 - - - - - 0.829 pre-B-cell leukemia homeobox interacting protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-2032]
27. smg5 ENSDARG00000041481 1286 1.713 - 0.724 0.989 - - - - - - SMG5 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-050913-144]
28. pou6f1 ENSDARG00000011570 1501 1.711 - 0.717 0.994 - - - - - - POU class 6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-530]
29. ranbp9 ENSDARG00000061048 2687 1.71 - - 0.967 - - - - - 0.743 RAN binding protein 9 [Source:ZFIN;Acc:ZDB-GENE-021030-5]
30. kifc1 ENSDARG00000001558 6658 1.704 - - 0.843 - - - - - 0.861 kinesin family member C1 [Source:ZFIN;Acc:ZDB-GENE-000208-21]
31. arf4a ENSDARG00000045989, ENSDARG00000103858 2545 1.697 - - 0.986 - - - 0.711 - - ADP-ribosylation factor 4a [Source:ZFIN;Acc:ZDB-GENE-040801-109]
32. hdac4 ENSDARG00000098349 1370 1.696 - 0.876 - - - - - - 0.820 histone deacetylase 4 [Source:ZFIN;Acc:ZDB-GENE-061013-95]
33. actr10 ENSDARG00000038432 1598 1.689 - 0.702 0.987 - - - - - - ARP10 actin related protein 10 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-768]
34. pdia5 ENSDARG00000069242 3576 1.676 - - 0.918 - - - 0.758 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
35. CABZ01076275.1 ENSDARG00000100753 5137 1.667 - - 0.963 - - - 0.704 - - scavenger receptor class B, member 2b [Source:NCBI gene;Acc:564077]
36. TMEM185A TMEM185A 5505 1.666 - - 0.951 - - - 0.715 - -
37. kansl2 ENSDARG00000056318, ENSDARG00000113311 4702 1.663 - - 0.962 - - 0.701 - - - KAT8 regulatory NSL complex subunit 2 [Source:ZFIN;Acc:ZDB-GENE-041010-67]
38. FRG1 ENSDARG00000056504 1196 1.663 - - - - - - 0.833 - 0.830 FSHD region gene 1 [Source:ZFIN;Acc:ZDB-GENE-050417-324]
39. ptplb ptplb 6135 1.661 - - 0.912 - - - 0.749 - -
40. ankzf1 ENSDARG00000041904 917 1.655 - 0.771 - - - - - - 0.884 ankyrin repeat and zinc finger domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-050309-80]
41. ubl3b ENSDARG00000021556 1210 1.653 - 0.807 - - - - - - 0.846 ubiquitin-like 3b [Source:ZFIN;Acc:ZDB-GENE-040630-4]
42. qser1 ENSDARG00000074750 597 1.646 - - - - - - 0.780 - 0.866 glutamine and serine rich 1 [Source:ZFIN;Acc:ZDB-GENE-030131-2978]
43. rab1ba ENSDARG00000058044 5080 1.639 - 0.731 0.908 - - - - - - zRAB1B, member RAS oncogene family a [Source:ZFIN;Acc:ZDB-GENE-040426-873]
44. cnot3a ENSDARG00000007135 3084 1.635 - - 0.895 - - - - - 0.740 CCR4-NOT transcription complex, subunit 3a [Source:ZFIN;Acc:ZDB-GENE-040927-6]
45. tpcn1 ENSDARG00000062362 563 1.617 - 0.729 - - - - - - 0.888 two pore segment channel 1 [Source:ZFIN;Acc:ZDB-GENE-060526-199]
46. pigl ENSDARG00000067752, ENSDARG00000116105 282 1.617 - 0.759 - - - - - - 0.858 phosphatidylinositol glycan anchor biosynthesis, class L [Source:ZFIN;Acc:ZDB-GENE-050506-60]
47. mrps18b ENSDARG00000007065 2121 1.613 - - - - - 0.765 - - 0.848 mitochondrial ribosomal protein S18B [Source:ZFIN;Acc:ZDB-GENE-050417-278]
48. ppap2b ppap2b 2900 1.603 - 0.716 - - - - 0.887 - -
49. loxl2a ENSDARG00000044010 1906 1.603 - - - - - - - 0.767 0.836 lysyl oxidase-like 2a [Source:ZFIN;Acc:ZDB-GENE-070818-1]
50. cwc22 ENSDARG00000014008 2385 1.602 - 0.829 - - - - - - 0.773 CWC22 spliceosome-associated protein homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-060929-452]
51. ube2j2 ENSDARG00000061161 844 1.6 - - - - - 0.764 - - 0.836 ubiquitin-conjugating enzyme E2, J2 (UBC6 homolog, yeast) [Source:ZFIN;Acc:ZDB-GENE-070410-28]
52. E2F6 E2F6 1271 1.592 - 0.758 - - - - 0.834 - -
53. dvl3a ENSDARG00000015707 1132 1.589 - 0.785 - - - - - - 0.804 dishevelled segment polarity protein 3a [Source:ZFIN;Acc:ZDB-GENE-010319-1]
54. vcp ENSDARG00000020008, ENSDARG00000116074 2284 1.585 - - 0.723 - - - - - 0.862 valosin containing protein [Source:ZFIN;Acc:ZDB-GENE-030131-5408]
55. lysmd3 ENSDARG00000024693 754 1.584 - 0.728 - - - - - - 0.856 LysM, putative peptidoglycan-binding, domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-040625-88]
56. pfkfb4l pfkfb4l 2539 1.583 - - - - - - 0.794 - 0.789
57. eml3 ENSDARG00000058038 449 1.582 - 0.703 - - - - - - 0.879 echinoderm microtubule associated protein like 3 [Source:ZFIN;Acc:ZDB-GENE-110304-3]
58. smg6 ENSDARG00000100481 493 1.58 - 0.707 - - - - - - 0.873 SMG6 nonsense mediated mRNA decay factor [Source:ZFIN;Acc:ZDB-GENE-081107-52]
59. hgs ENSDARG00000020960 3574 1.58 - 0.827 - - - - - - 0.753 hepatocyte growth factor-regulated tyrosine kinase substrate [Source:ZFIN;Acc:ZDB-GENE-030131-6107]
60. hic1l ENSDARG00000045660 1489 1.576 - - - - - - 0.735 - 0.841 hypermethylated in cancer 1 like [Source:ZFIN;Acc:ZDB-GENE-030620-1]
61. dkk3b ENSDARG00000070683 209 1.572 - 0.715 - - - - - - 0.857 dickkopf WNT signaling pathway inhibitor 3b [Source:ZFIN;Acc:ZDB-GENE-061207-74]
62. phactr4a ENSDARG00000015552 1315 1.569 - 0.825 - - - - - 0.744 - phosphatase and actin regulator 4a [Source:ZFIN;Acc:ZDB-GENE-051030-69]
63. hprt1l ENSDARG00000014866 696 1.569 - - - 0.708 - - - - 0.861 hypoxanthine phosphoribosyltransferase 1, like [Source:ZFIN;Acc:ZDB-GENE-040625-17]
64. ccdc82 ENSDARG00000014966 563 1.564 - - - - - 0.708 - - 0.856 coiled-coil domain containing 82 [Source:ZFIN;Acc:ZDB-GENE-030131-5749]
65. hook1 ENSDARG00000042946 452 1.557 - 0.750 - - - - 0.807 - - hook microtubule-tethering protein 1 [Source:ZFIN;Acc:ZDB-GENE-041001-159]
66. igf2bp2a ENSDARG00000003421 2810 1.557 - 0.735 - - - - - - 0.822 insulin-like growth factor 2 mRNA binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-070912-44]
67. MIB1 ENSDARG00000102184 3285 1.557 - 0.756 - - - - - - 0.801 mindbomb E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-030404-2]
68. cacna1ba ENSDARG00000021735 870 1.555 - - - - - - - 0.746 0.809 calcium channel, voltage-dependent, N type, alpha 1B subunit, a [Source:ZFIN;Acc:ZDB-GENE-060531-44]
69. phc2a ENSDARG00000056695, ENSDARG00000110253 1726 1.554 - - - - - 0.717 - - 0.837 polyhomeotic homolog 2a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-020312-1]
70. lnpep ENSDARG00000100394 1436 1.553 - - - - - - 0.760 - 0.793 leucyl/cystinyl aminopeptidase [Source:ZFIN;Acc:ZDB-GENE-030131-1534]
71. si:ch211-86h15.1 ENSDARG00000074098 354 1.551 - 0.825 - - - - 0.726 - - si:ch211-86h15.1 [Source:ZFIN;Acc:ZDB-GENE-081107-38]
72. cmtm4 ENSDARG00000052020, ENSDARG00000115570 1033 1.55 - 0.737 - - - - 0.813 - - CKLF-like MARVEL transmembrane domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-040718-195]
73. PARL 2511 1.548 - - - - - 0.716 - - 0.832 presenilin associated rhomboid like
74. arhgef4 ENSDARG00000012914 1464 1.544 - 0.759 - - - - - - 0.785 Rho guanine nucleotide exchange factor (GEF) 4 [Source:ZFIN;Acc:ZDB-GENE-070912-575]
75. zgc:112998 ENSDARG00000079760 380 1.542 - 0.753 - - - - 0.789 - - zgc:112998 [Source:ZFIN;Acc:ZDB-GENE-050320-134]
76. foxp1b ENSDARG00000014181 2594 1.541 - 0.753 - - - - 0.788 - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
77. myo1b ENSDARG00000024694 1761 1.54 - - - - - - 0.726 - 0.814 myosin IB [Source:ZFIN;Acc:ZDB-GENE-030131-695]
78. kank2 ENSDARG00000018393 1804 1.538 - - - - - - 0.713 - 0.825 KN motif and ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-040724-121]
79. mob3a ENSDARG00000019113 2551 1.537 - - - - - - 0.759 0.778 - MOB kinase activator 3A [Source:ZFIN;Acc:ZDB-GENE-030131-4091]
80. ednraa ENSDARG00000011876, ENSDARG00000114764 1573 1.536 - 0.805 - - - - 0.731 - - endothelin receptor type Aa [Source:ZFIN;Acc:ZDB-GENE-010906-2]
81. sdc4 ENSDARG00000059906 10105 1.536 - 0.834 - - - - 0.702 - - syndecan 4 [Source:ZFIN;Acc:ZDB-GENE-061111-1]
82. srebf1 ENSDARG00000067607 1537 1.535 - 0.765 - - - - - - 0.770 sterol regulatory element binding transcription factor 1 [Source:ZFIN;Acc:ZDB-GENE-090812-3]
83. pdcd11 ENSDARG00000052480 2791 1.53 - - - - - - 0.701 - 0.829 programmed cell death 11 [Source:ZFIN;Acc:ZDB-GENE-030131-4076]
84. LIG1 ENSDARG00000060041, ENSDARG00000110159, ENSDARG00000113788 8110 1.527 - - - - - - 0.721 - 0.806 ligase I, DNA, ATP-dependent [Source:ZFIN;Acc:ZDB-GENE-110404-2]
85. cnot1 ENSDARG00000004174, ENSDARG00000109411 4625 1.526 - - 0.715 - - - 0.811 - - CCR4-NOT transcription complex, subunit 1 [Source:ZFIN;Acc:ZDB-GENE-040915-1]
86. CFP ENSDARG00000094451 852 1.521 - 0.713 - - - - - - 0.808 complement factor properdin [Source:ZFIN;Acc:ZDB-GENE-030131-9247]
87. supt6h ENSDARG00000006524 3221 1.52 - 0.776 - - - - - - 0.744 SPT6 homolog, histone chaperone [Source:ZFIN;Acc:ZDB-GENE-030131-7949]
88. kirrel3l ENSDARG00000104665 499 1.519 - - - - - 0.759 0.760 - - kirre like nephrin family adhesion molecule 3, like [Source:ZFIN;Acc:ZDB-GENE-070831-1]
89. tnk1 ENSDARG00000069433 639 1.509 - 0.734 - - - - - 0.775 - tyrosine kinase, non-receptor, 1 [Source:ZFIN;Acc:ZDB-GENE-030131-7427]
90. ccdc101 ccdc101 778 1.507 - 0.765 - - - - 0.742 - -
91. rca2.1 ENSDARG00000056075 3410 1.502 - 0.725 - - - - 0.777 - - regulator of complement activation group 2 gene 1 [Source:ZFIN;Acc:ZDB-GENE-050320-60]
92. apaf1 ENSDARG00000021239 1185 1.495 - 0.747 - - - - - 0.748 - apoptotic peptidase activating factor 1 [Source:ZFIN;Acc:ZDB-GENE-000616-4]
93. scaf4b ENSDARG00000018854 734 1.494 - 0.757 - - - - 0.737 - - SR-related CTD-associated factor 4b [Source:ZFIN;Acc:ZDB-GENE-050506-42]
94. RNASEH2C ENSDARG00000089637 1673 1.493 - - - - - - 0.717 - 0.776 ribonuclease H2, subunit C [Source:ZFIN;Acc:ZDB-GENE-030131-2469]
95. rgl1 ENSDARG00000005989, ENSDARG00000114367 2501 1.493 - 0.768 - - - - - - 0.725 ral guanine nucleotide dissociation stimulator-like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1816]
96. psma6a ENSDARG00000019398 2702 1.492 - - 0.720 0.772 - - - - - proteasome subunit alpha 6a [Source:ZFIN;Acc:ZDB-GENE-020326-1]
97. rimkla ENSDARG00000016830, ENSDARG00000112193 4111 1.484 - 0.705 - - - - - - 0.779 ribosomal modification protein rimK-like family member A [Source:ZFIN;Acc:ZDB-GENE-040912-20]
98. plcd3a ENSDARG00000052957 467 1.483 - 0.736 - - - - 0.747 - - phospholipase C, delta 3a [Source:ZFIN;Acc:ZDB-GENE-070620-1]
99. znf207a ENSDARG00000015538 2630 1.477 - - - - - - 0.765 - 0.712 zinc finger protein 207, a [Source:ZFIN;Acc:ZDB-GENE-040426-2273]
100. srrm1 ENSDARG00000001244 4972 1.473 - 0.722 - - - 0.751 - - - serine/arginine repetitive matrix 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2789]

There are 1632 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA