Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmeff1b

Gene Name Gene ID Reads Annotation
tmeff1b ENSDARG00000056740 11253 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]










Genes with expression patterns similar to tmeff1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmeff1b ENSDARG00000056740 11253 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
2. clstn1 ENSDARG00000031720 5286 3.348 - - - - 0.833 0.909 0.826 0.780 - calsyntenin 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1064]
3. plp1a ENSDARG00000103732 3544 3.325 - - - 0.789 0.875 0.788 0.873 - - proteolipid protein 1a [Source:ZFIN;Acc:ZDB-GENE-001202-1]
4. tmem35 ENSDARG00000052567 5685 3.321 - - 0.898 - - 0.881 0.833 0.709 - transmembrane protein 35 [Source:ZFIN;Acc:ZDB-GENE-030815-1]
5. chd4a ENSDARG00000063535, ENSDARG00000111791 4059 3.281 - - - - 0.818 0.752 0.871 0.840 - chromodomain helicase DNA binding protein 4a [Source:ZFIN;Acc:ZDB-GENE-041111-187]
6. lppr3a lppr3a 1294 3.235 - - - 0.770 0.819 0.888 0.758 - -
7. fmnl2b ENSDARG00000075041 1744 3.165 - - - 0.743 0.866 0.813 0.743 - - formin-like 2b [Source:ZFIN;Acc:ZDB-GENE-041111-182]
8. cdk5r1b ENSDARG00000045087 2075 2.802 - - - - - 0.963 0.878 - 0.961 cyclin-dependent kinase 5, regulatory subunit 1b (p35) [Source:ZFIN;Acc:ZDB-GENE-040718-220]
9. scrt2 ENSDARG00000056175 4331 2.779 - - 0.987 - - 0.890 0.902 - - scratch family zinc finger 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4097]
10. BX957337.1 BX957337.1 1685 2.723 - - - - - 0.853 0.902 - 0.968
11. vsnl1a ENSDARG00000023228 1584 2.711 - - - - - 0.876 0.876 - 0.959 visinin-like 1a [Source:ZFIN;Acc:ZDB-GENE-041001-211]
12. FP016176.1 FP016176.1 7030 2.669 - - - - 0.896 0.840 0.933 - -
13. dbx2 2971 2.658 - - - - 0.832 0.917 0.909 - - developing brain homeobox 2
14. pacsin1b ENSDARG00000042128 1051 2.649 - - - - - 0.863 0.891 0.895 - protein kinase C and casein kinase substrate in neurons 1b [Source:ZFIN;Acc:ZDB-GENE-050913-35]
15. ZFHX3 ENSDARG00000103057 7759 2.644 - - - 0.787 - 0.925 0.932 - - zinc finger homeobox 3 [Source:ZFIN;Acc:ZDB-GENE-030131-7577]
16. nup155 ENSDARG00000001777 3417 2.636 - - 0.897 - - - - 0.774 0.965 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
17. myt1a ENSDARG00000074030, ENSDARG00000116035 2839 2.635 - - - 0.827 - 0.906 0.902 - - myelin transcription factor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3885]
18. olfm1b ENSDARG00000014053 1392 2.625 - - - - - 0.914 0.924 0.787 - olfactomedin 1b [Source:ZFIN;Acc:ZDB-GENE-040801-228]
19. atp6v0a1b ENSDARG00000015174 1052 2.62 - - - - - 0.957 0.839 0.824 - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
20. id4 ENSDARG00000045131 2916 2.61 - 0.848 - - - 0.887 0.875 - - inhibitor of DNA binding 4 [Source:ZFIN;Acc:ZDB-GENE-051113-208]
21. metrn ENSDARG00000030367, ENSDARG00000112407, ENSDARG00000115842 7032 2.609 - - - - 0.872 0.827 0.910 - - meteorin, glial cell differentiation regulator [Source:ZFIN;Acc:ZDB-GENE-050102-1]
22. lhx1a ENSDARG00000014018 958 2.592 - - - - - 0.893 0.874 0.825 - LIM homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-980526-347]
23. sox19a ENSDARG00000010770, ENSDARG00000110497 4683 2.58 - - - - 0.828 0.841 0.911 - - SRY (sex determining region Y)-box 19a [Source:ZFIN;Acc:ZDB-GENE-980526-102]
24. ndrg4 ENSDARG00000103937 1234 2.573 - - - 0.756 - 0.914 0.903 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
25. nrarpb ENSDARG00000018958 6225 2.558 - - - - - 0.927 0.893 0.738 - NOTCH regulated ankyrin repeat protein b [Source:ZFIN;Acc:ZDB-GENE-030515-7]
26. elavl3 ENSDARG00000014420 8644 2.544 - - - 0.760 - 0.891 0.893 - - ELAV like neuron-specific RNA binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-980526-76]
27. hmgb1b ENSDARG00000030479 10398 2.533 - - - - - 0.859 0.922 0.752 - high mobility group box 1b [Source:ZFIN;Acc:ZDB-GENE-030131-8480]
28. aldocb ENSDARG00000019702 2111 2.53 - - - - - 0.889 0.884 0.757 - aldolase C, fructose-bisphosphate, b [Source:ZFIN;Acc:ZDB-GENE-030821-1]
29. cadpsb ENSDARG00000070567 458 2.514 - - - - - 0.873 0.865 0.776 - Ca2+-dependent activator protein for secretion b [Source:ZFIN;Acc:ZDB-GENE-110621-2]
30. si:ch73-21g5.7 ENSDARG00000093156 9412 2.51 - - - 0.842 - 0.761 0.907 - - si:ch73-21g5.7 [Source:ZFIN;Acc:ZDB-GENE-081104-260]
31. C8H1orf106 C8H1orf106 2690 2.509 - - - 0.814 - 0.891 0.804 - -
32. pcdh1gc5 ENSDARG00000104826 10052 2.495 - - - - - 0.916 0.868 0.711 - protocadherin 1 gamma c 5 [Source:ZFIN;Acc:ZDB-GENE-041118-16]
33. s1pr1 ENSDARG00000042690, ENSDARG00000113842, ENSDARG00000116038 2510 2.494 - - - 0.720 - 0.953 0.821 - - sphingosine-1-phosphate receptor 1 [Source:ZFIN;Acc:ZDB-GENE-001228-2]
34. dbx1b ENSDARG00000001859, ENSDARG00000113468 810 2.489 - - - 0.772 - 0.859 0.858 - - developing brain homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-000128-11]
35. tox ENSDARG00000032317 9126 2.478 - - - - - 0.827 0.883 0.768 - thymocyte selection-associated high mobility group box [Source:ZFIN;Acc:ZDB-GENE-070912-181]
36. mb21d2a mb21d2a 421 2.473 - - - 0.759 - 0.815 0.899 - -
37. cspg5a ENSDARG00000069981 1699 2.47 - - - 0.703 - 0.892 0.875 - - chondroitin sulfate proteoglycan 5a [Source:ZFIN;Acc:ZDB-GENE-080425-4]
38. pou3f2b ENSDARG00000076262, ENSDARG00000112713 2439 2.467 - - - 0.735 - 0.911 0.821 - - POU class 3 homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-980526-370]
39. C7H4orf48 C7H4orf48 1455 2.465 - - - - 0.813 0.862 0.790 - -
40. h2afva ENSDARG00000068820 16427 2.464 0.962 - - - 0.757 - 0.745 - - H2A histone family, member Va [Source:ZFIN;Acc:ZDB-GENE-020717-1]
41. syngr3a ENSDARG00000014871 405 2.463 - - - 0.720 - 0.869 0.874 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
42. chd7 ENSDARG00000075211 12085 2.463 - 0.835 - - - 0.715 0.913 - - chromodomain helicase DNA binding protein 7 [Source:ZFIN;Acc:ZDB-GENE-070912-179]
43. tmpob ENSDARG00000022978 8121 2.461 - - - - - 0.787 0.871 0.803 - thymopoietin b [Source:ZFIN;Acc:ZDB-GENE-050522-8]
44. nckap5l ENSDARG00000079148 4227 2.457 0.996 - - - - 0.730 0.731 - - NCK-associated protein 5-like [Source:ZFIN;Acc:ZDB-GENE-090313-304]
45. LANCL2 ENSDARG00000045465 1221 2.454 - - - 0.777 - 0.833 0.844 - - LanC lantibiotic synthetase component C-like 2 (bacterial) [Source:ZFIN;Acc:ZDB-GENE-070209-191]
46. lrrtm1 ENSDARG00000052713 1041 2.451 - - - - - 0.810 0.883 0.758 - leucine rich repeat transmembrane neuronal 1 [Source:ZFIN;Acc:ZDB-GENE-050506-80]
47. onecutl ENSDARG00000040253 2143 2.451 - - - - - 0.857 0.793 0.801 - one cut domain, family member, like [Source:ZFIN;Acc:ZDB-GENE-020531-1]
48. ppp1r14ab ENSDARG00000017710, ENSDARG00000110779 3296 2.447 - - 0.706 0.784 - 0.957 - - - protein phosphatase 1, regulatory (inhibitor) subunit 14Ab [Source:ZFIN;Acc:ZDB-GENE-040426-1783]
49. TNRC6C_2 TNRC6C_2 2444 2.443 - - - - - 0.884 0.745 0.814 -
50. mdkb ENSDARG00000020708 5393 2.441 - - - 0.835 - 0.805 0.801 - - midkine b [Source:ZFIN;Acc:ZDB-GENE-010131-6]
51. ube2e2 ENSDARG00000034670 5918 2.414 - - 0.879 0.812 - 0.723 - - - ubiquitin-conjugating enzyme E2E 2 [Source:ZFIN;Acc:ZDB-GENE-040801-237]
52. syt3 ENSDARG00000075830 430 2.407 - - - 0.710 - 0.854 0.843 - - synaptotagmin III [Source:ZFIN;Acc:ZDB-GENE-090601-1]
53. st18 663 2.391 - - - 0.746 - 0.820 0.825 - - suppression of tumorigenicity 18, zinc finger
54. pou3f1 ENSDARG00000009823, ENSDARG00000112302 7037 2.388 - - - 0.750 0.710 0.928 - - - POU class 3 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-980526-372]
55. CYTH2 ENSDARG00000028800 2349 2.383 - - - - - 0.755 0.746 0.882 - cytohesin 2 [Source:HGNC Symbol;Acc:HGNC:9502]
56. appb ENSDARG00000055543, ENSDARG00000109552 4461 2.383 - - - 0.744 - 0.756 0.883 - - amyloid beta (A4) precursor protein b [Source:ZFIN;Acc:ZDB-GENE-020220-1]
57. adam23a ENSDARG00000062323 580 2.381 - - - 0.712 - 0.872 0.797 - - ADAM metallopeptidase domain 23a [Source:ZFIN;Acc:ZDB-GENE-070810-2]
58. scocb ENSDARG00000002217 1844 2.372 - - - - 0.812 0.808 0.752 - - short coiled-coil protein b [Source:ZFIN;Acc:ZDB-GENE-041010-41]
59. lmo3 ENSDARG00000008720, ENSDARG00000114518 4773 2.37 - - - 0.721 - 0.848 0.801 - - LIM domain only 3 [Source:ZFIN;Acc:ZDB-GENE-050522-201]
60. marcksa ENSDARG00000004049 2518 2.364 - - - 0.779 - 0.815 0.770 - - myristoylated alanine-rich protein kinase C substrate a [Source:ZFIN;Acc:ZDB-GENE-050522-145]
61. xylt1 ENSDARG00000061248 2357 2.363 - - - - - 0.817 0.793 0.753 - xylosyltransferase I [Source:ZFIN;Acc:ZDB-GENE-111017-2]
62. khsrp ENSDARG00000026489 15738 2.363 - - - - - 0.796 0.801 0.766 - KH-type splicing regulatory protein [Source:ZFIN;Acc:ZDB-GENE-030131-4357]
63. nkx6.1 ENSDARG00000022569 3779 2.359 - - - 0.768 0.805 - 0.786 - - NK6 homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040718-178]
64. unc119b ENSDARG00000044362 1528 2.356 - - - 0.776 - - 0.787 0.793 - unc-119 homolog b (C. elegans) [Source:ZFIN;Acc:ZDB-GENE-050201-2]
65. gipc1 ENSDARG00000104483 2913 2.354 - - - 0.712 - 0.786 0.856 - - GIPC PDZ domain containing family, member 1 [Source:ZFIN;Acc:ZDB-GENE-060726-1]
66. zeb2a ENSDARG00000062338, ENSDARG00000111349, ENSDARG00000115964 6087 2.353 - - - - - 0.787 0.787 0.779 - zinc finger E-box binding homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-070912-553]
67. SPTBN4_1 ENSDARG00000092624 473 2.352 - - - 0.746 - 0.840 0.766 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
68. ENDOD1_5 ENDOD1_5 8723 2.35 - - - 0.769 - 0.801 - 0.780 -
69. kidins220b ENSDARG00000017338 1937 2.344 - - - - 0.809 0.720 - 0.815 - kinase D-interacting substrate 220b [Source:ZFIN;Acc:ZDB-GENE-030131-7824]
70. atp1b4 ENSDARG00000053262 1337 2.321 - - - 0.721 - 0.829 0.771 - - ATPase Na+/K+ transporting subunit beta 4 [Source:ZFIN;Acc:ZDB-GENE-070412-1]
71. hnrnpub ENSDARG00000004735 16496 2.316 - - - 0.729 - 0.766 0.821 - - heterogeneous nuclear ribonucleoprotein Ub [Source:ZFIN;Acc:ZDB-GENE-030131-6422]
72. RNF38 ENSDARG00000062055 3901 2.291 - - - - 0.819 0.752 0.720 - - ring finger protein 38 [Source:ZFIN;Acc:ZDB-GENE-030131-8693]
73. irx5a ENSDARG00000034043 1694 2.286 - - - - - 0.728 0.725 0.833 - iroquois homeobox 5a [Source:ZFIN;Acc:ZDB-GENE-010716-2]
74. mtss1l mtss1l 2494 2.261 - - - 0.703 - - 0.819 0.739 -
75. hnrpl 6412 2.255 - - - - 0.741 0.778 0.736 - - heterogeneous nuclear ribonucleoprotein L, transcript variant X1
76. zic2b ENSDARG00000037178, ENSDARG00000112354 993 2.245 - - - 0.739 - 0.740 0.766 - - zic family member 2 (odd-paired homolog, Drosophila) b [Source:ZFIN;Acc:ZDB-GENE-030219-92]
77. fam49a ENSDARG00000006672 939 2.228 - - - 0.745 - 0.729 0.754 - - family with sequence similarity 49, member A [Source:ZFIN;Acc:ZDB-GENE-031002-50]
78. naa15a ENSDARG00000003213 5889 1.953 0.985 - - - - - - - 0.968 N(alpha)-acetyltransferase 15, NatA auxiliary subunit a [Source:ZFIN;Acc:ZDB-GENE-030131-2392]
79. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.932 0.970 - - - - - - - 0.962 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
80. itgb1b.1 ENSDARG00000053232 4721 1.919 0.942 - 0.977 - - - - - - integrin, beta 1b.1 [Source:ZFIN;Acc:ZDB-GENE-060803-3]
81. rbfox3 rbfox3 1443 1.902 - - - - - 0.970 0.932 - -
82. scn8aa ENSDARG00000005775 792 1.884 - - - - - 0.978 0.906 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
83. nova1 ENSDARG00000020178 4129 1.881 - - - - - 0.964 0.917 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
84. pax6a ENSDARG00000103379 3061 1.875 - - - - - 0.964 0.911 - - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
85. cnrip1a ENSDARG00000091683 1491 1.873 - - - - - - 0.905 - 0.968 cannabinoid receptor interacting protein 1a [Source:ZFIN;Acc:ZDB-GENE-040801-126]
86. dpysl3 ENSDARG00000002587 4381 1.87 - - - - - 0.976 0.894 - - dihydropyrimidinase-like 3 [Source:ZFIN;Acc:ZDB-GENE-050720-2]
87. tuba1c ENSDARG00000055216 8384 1.865 - - - - - 0.960 0.905 - - tubulin, alpha 1c [Source:ZFIN;Acc:ZDB-GENE-061114-1]
88. sall3b ENSDARG00000057586 982 1.86 - - - - - 0.968 0.892 - - spalt-like transcription factor 3b [Source:ZFIN;Acc:ZDB-GENE-030131-9140]
89. gsx1 ENSDARG00000035735 1243 1.858 - - - - - 0.949 0.909 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
90. slc1a2b ENSDARG00000102453 3136 1.857 - - - - - 0.955 0.902 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
91. SPOCK1 ENSDARG00000074644 794 1.856 - - - - - 0.969 0.887 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 1 [Source:ZFIN;Acc:ZDB-GENE-110428-1]
92. vsnl1b ENSDARG00000044053 1120 1.855 - - - - - 0.954 0.901 - - visinin-like 1b [Source:ZFIN;Acc:ZDB-GENE-080225-39]
93. kcnc3a ENSDARG00000055855 1821 1.854 - - - - - 0.950 0.904 - - potassium voltage-gated channel, Shaw-related subfamily, member 3a [Source:ZFIN;Acc:ZDB-GENE-100901-1]
94. sh3gl2 sh3gl2 1305 1.853 - - - - - 0.909 0.944 - -
95. nell2b ENSDARG00000062797 854 1.853 - - - - - 0.939 0.914 - - neural EGFL like 2b [Source:ZFIN;Acc:ZDB-GENE-030131-8026]
96. stx1b ENSDARG00000000503 2724 1.852 - - - - - 0.939 0.913 - - syntaxin 1B [Source:ZFIN;Acc:ZDB-GENE-000330-4]
97. INA INA 950 1.852 - - - - - 0.954 0.898 - -
98. nbeaa ENSDARG00000070080 862 1.852 - - - - - 0.941 0.911 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
99. grin1a ENSDARG00000027828 1327 1.852 - - - - - 0.964 0.888 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
100. cntn4 ENSDARG00000098161, ENSDARG00000109387 437 1.851 - - - - - 0.937 0.914 - - contactin 4 [Source:ZFIN;Acc:ZDB-GENE-060929-776]

There are 2648 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA