Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmed9

Gene Name Gene ID Reads Annotation
tmed9 ENSDARG00000004261 10013 transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]










Genes with expression patterns similar to tmed9

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmed9 ENSDARG00000004261 10013 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane p24 trafficking protein 9 [Source:ZFIN;Acc:ZDB-GENE-050417-434]
2. tjp1a ENSDARG00000077506 2658 2.453 - - 0.766 - - 0.981 0.706 - - tight junction protein 1a [Source:ZFIN;Acc:ZDB-GENE-031001-2]
3. chmp4b chmp4b 5318 2.311 - - - - - 0.817 0.722 0.772 -
4. meaf6 ENSDARG00000101216 6865 1.966 - - - - - 0.979 - - 0.987 MYST/Esa1-associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-040808-12]
5. NDNF ENSDARG00000062936 7287 1.958 - - - - - 0.968 - - 0.990 neuron-derived neurotrophic factor [Source:ZFIN;Acc:ZDB-GENE-030131-207]
6. rps17 ENSDARG00000104011 27028 1.851 - 0.937 - - - - - - 0.914 ribosomal protein S17 [Source:ZFIN;Acc:ZDB-GENE-040426-1852]
7. sdhb ENSDARG00000075768 5493 1.797 - - - - - 0.977 0.820 - - succinate dehydrogenase complex, subunit B, iron sulfur (Ip) [Source:ZFIN;Acc:ZDB-GENE-030131-8005]
8. gpx4b ENSDARG00000076836 8085 1.792 - - - - - - 0.800 - 0.992 glutathione peroxidase 4b [Source:ZFIN;Acc:ZDB-GENE-030410-3]
9. cd99 ENSDARG00000051975 3824 1.76 - - - - - 0.981 0.779 - - CD99 molecule [Source:ZFIN;Acc:ZDB-GENE-061103-391]
10. fam50a ENSDARG00000024895 3020 1.751 - - 0.758 - - - - - 0.993 family with sequence similarity 50, member A [Source:ZFIN;Acc:ZDB-GENE-050417-110]
11. lman2 ENSDARG00000061854 6251 1.75 - - - - - 0.981 0.769 - - lectin, mannose-binding 2 [Source:ZFIN;Acc:ZDB-GENE-070209-149]
12. dmxl2 ENSDARG00000091293 1593 1.745 - - 0.763 - - 0.982 - - - Dmx-like 2 [Source:ZFIN;Acc:ZDB-GENE-031007-6]
13. cenpf ENSDARG00000055133 5267 1.745 - - 0.753 - - - - - 0.992 centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
14. bin3 ENSDARG00000099651 3295 1.744 - - - - - - 0.751 - 0.993 bridging integrator 3 [Source:ZFIN;Acc:ZDB-GENE-030131-2696]
15. zfand6 ENSDARG00000098443 2507 1.732 0.750 - - - - 0.982 - - - zinc finger, AN1-type domain 6 [Source:ZFIN;Acc:ZDB-GENE-030131-8405]
16. irf2bp2a ENSDARG00000004702 6719 1.731 - - - - - 0.981 0.750 - - interferon regulatory factor 2 binding protein 2a [Source:ZFIN;Acc:ZDB-GENE-030131-7809]
17. cul3a ENSDARG00000038967 6155 1.723 0.741 - - - - 0.982 - - - cullin 3a [Source:ZFIN;Acc:ZDB-GENE-030131-3376]
18. clint1a ENSDARG00000025535 4965 1.713 - - - - - 0.982 0.731 - - clathrin interactor 1a [Source:ZFIN;Acc:ZDB-GENE-030131-2590]
19. snrnp27 ENSDARG00000035625 9080 1.709 0.715 - - - - - - - 0.994 small nuclear ribonucleoprotein 27 (U4/U6.U5) [Source:ZFIN;Acc:ZDB-GENE-040718-457]
20. adnp2b ENSDARG00000028431 4683 1.709 - - - - - - 0.735 - 0.974 ADNP homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5930]
21. cdca5 ENSDARG00000044437 2041 1.707 - - 0.725 - - 0.982 - - - cell division cycle associated 5 [Source:ZFIN;Acc:ZDB-GENE-030131-235]
22. txndc17 ENSDARG00000058079 3533 1.704 - - - - - - 0.711 - 0.993 thioredoxin domain containing 17 [Source:ZFIN;Acc:ZDB-GENE-040801-193]
23. h3f3b.1_1 ENSDARG00000020504, ENSDARG00000068434, ENSDARG00000068436 26947 1.7 - - - - - 0.972 0.728 - - H3 histone, family 3B.1 [Source:ZFIN;Acc:ZDB-GENE-050417-65]
24. chpt1 ENSDARG00000014572 2926 1.691 - - - - - 0.983 0.708 - - choline phosphotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1325]
25. rbfox1l ENSDARG00000021184, ENSDARG00000111700 26249 1.684 - 0.753 - - - 0.931 - - - RNA binding fox-1 homolog 1, like [Source:ZFIN;Acc:ZDB-GENE-040923-2]
26. syne2b ENSDARG00000053484 9225 1.676 - - - - - 0.967 0.709 - - spectrin repeat containing, nuclear envelope 2b [Source:ZFIN;Acc:ZDB-GENE-071218-5]
27. si:dkeyp-44a8.2 ENSDARG00000092493 8308 1.675 - 0.701 - - - 0.974 - - - si:dkeyp-44a8.2 [Source:ZFIN;Acc:ZDB-GENE-070705-542]
28. vps29 ENSDARG00000069521 5599 1.646 - - 0.806 - - - 0.840 - - vacuolar protein sorting 29 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-8764]
29. slc30a7 ENSDARG00000019998, ENSDARG00000112372 2967 1.614 0.746 - - - - - 0.868 - - solute carrier family 30 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-030131-5650]
30. gspt1l ENSDARG00000098627 8381 1.612 - - 0.721 - - - 0.891 - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
31. metap1 ENSDARG00000033440, ENSDARG00000110334 6569 1.609 - - 0.740 - - - 0.869 - - methionyl aminopeptidase 1 [Source:ZFIN;Acc:ZDB-GENE-050626-124]
32. capn2b ENSDARG00000055592 5431 1.598 0.751 - - - - - - 0.847 - calpain 2, (m/II) large subunit b [Source:ZFIN;Acc:ZDB-GENE-050522-84]
33. fgd4a ENSDARG00000101471, ENSDARG00000115095 1887 1.589 - - 0.785 - - 0.804 - - - FYVE, RhoGEF and PH domain containing 4a [Source:ZFIN;Acc:ZDB-GENE-050420-347]
34. sash1a ENSDARG00000007179 2497 1.585 - - 0.761 - - - 0.824 - - SAM and SH3 domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030131-9960]
35. serpinh1a ENSDARG00000075954 6488 1.581 - - - - - - 0.793 0.788 - serpin peptidase inhibitor, clade H (heat shock protein 47), member 1a [Source:ZFIN;Acc:ZDB-GENE-080219-21]
36. ctnna1 ENSDARG00000102441 7984 1.574 0.794 - - - - - 0.780 - - catenin (cadherin-associated protein), alpha 1 [Source:ZFIN;Acc:ZDB-GENE-991207-24]
37. ablim1b ENSDARG00000045064, ENSDARG00000111454, ENSDARG00000112629 2672 1.563 - - 0.759 - - - 0.804 - - actin binding LIM protein 1b [Source:ZFIN;Acc:ZDB-GENE-050327-91]
38. qdpra ENSDARG00000040190 4064 1.545 - 0.705 - - - 0.840 - - - quinoid dihydropteridine reductase a [Source:ZFIN;Acc:ZDB-GENE-070705-197]
39. sp3a ENSDARG00000001549 1994 1.545 0.703 - - - - - 0.842 - - sp3a transcription factor [Source:ZFIN;Acc:ZDB-GENE-070410-111]
40. cfl1 ENSDARG00000021124 78399 1.545 - 0.781 - - - 0.764 - - - cofilin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-215]
41. pdia3 ENSDARG00000102640 7239 1.541 0.714 - - - - - 0.827 - - protein disulfide isomerase family A, member 3 [Source:ZFIN;Acc:ZDB-GENE-031002-9]
42. vps4b ENSDARG00000069175 1922 1.54 - - - - - - 0.798 0.742 - vacuolar protein sorting 4b homolog B (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040426-1235]
43. mcm3ap ENSDARG00000021402 1271 1.538 0.719 - - - - - 0.819 - - minichromosome maintenance complex component 3 associated protein [Source:ZFIN;Acc:ZDB-GENE-040715-1]
44. CT573103.1 ENSDARG00000097550 950 1.529 - - 0.785 - - - 0.744 - -
45. arpc1a ENSDARG00000008383 7353 1.527 - - - - - - 0.812 0.715 - actin related protein 2/3 complex, subunit 1A [Source:ZFIN;Acc:ZDB-GENE-040116-1]
46. sec61b ENSDARG00000076568 11859 1.51 - - - - 0.715 - 0.795 - - Sec61 translocon beta subunit [Source:ZFIN;Acc:ZDB-GENE-040718-260]
47. slc39a7 ENSDARG00000104451 6368 1.507 - - - - - - 0.770 0.737 - solute carrier family 39 (zinc transporter), member 7 [Source:ZFIN;Acc:ZDB-GENE-991110-20]
48. eif4e3 ENSDARG00000005078 1624 1.502 - - 0.778 - - - 0.724 - - eukaryotic translation initiation factor 4E family member 3 [Source:ZFIN;Acc:ZDB-GENE-040912-156]
49. agrn ENSDARG00000079388, ENSDARG00000110127 5806 1.501 0.745 - - - - - 0.756 - - agrin [Source:ZFIN;Acc:ZDB-GENE-030131-1033]
50. sec61a1 ENSDARG00000021669 20408 1.5 - - - - - 0.707 0.793 - - Sec61 translocon alpha 1 subunit [Source:ZFIN;Acc:ZDB-GENE-020418-2]
51. eif3ja ENSDARG00000012603 6324 1.496 - - 0.722 - - - 0.774 - - eukaryotic translation initiation factor 3, subunit Ja [Source:ZFIN;Acc:ZDB-GENE-040426-1266]
52. baxa ENSDARG00000020623, ENSDARG00000089129 2611 1.495 0.703 - - - - - 0.792 - - BCL2 associated X, apoptosis regulator a [Source:ZFIN;Acc:ZDB-GENE-000511-6]
53. flot2a ENSDARG00000004830 5276 1.49 - - 0.772 - - - 0.718 - - flotillin 2a [Source:ZFIN;Acc:ZDB-GENE-020430-3]
54. srebf2 ENSDARG00000063438 1982 1.489 - - - - - - 0.767 0.722 - sterol regulatory element binding transcription factor 2 [Source:ZFIN;Acc:ZDB-GENE-070410-8]
55. paxip1 ENSDARG00000005606 1417 1.484 - - 0.775 - - - - 0.709 - PAX interacting (with transcription-activation domain) protein 1 [Source:ZFIN;Acc:ZDB-GENE-041010-214]
56. pdia5 ENSDARG00000069242 3576 1.479 - - 0.736 - - - 0.743 - - protein disulfide isomerase family A, member 5 [Source:ZFIN;Acc:ZDB-GENE-030521-5]
57. pcnp ENSDARG00000037713 2754 1.47 - - 0.739 - - - - 0.731 - PEST proteolytic signal containing nuclear protein [Source:ZFIN;Acc:ZDB-GENE-041010-130]
58. lsm8 ENSDARG00000091656, ENSDARG00000111914 2751 1.466 - - 0.745 - - - 0.721 - - LSM8 homolog, U6 small nuclear RNA associated [Source:ZFIN;Acc:ZDB-GENE-070629-3]
59. coro7 ENSDARG00000089616 2141 1.462 - - - - - - 0.734 0.728 - coronin 7 [Source:ZFIN;Acc:ZDB-GENE-050706-137]
60. ppib ENSDARG00000092798 21969 1.461 - - - - - 0.735 - 0.726 - peptidylprolyl isomerase B (cyclophilin B) [Source:ZFIN;Acc:ZDB-GENE-040426-1955]
61. ptges3a ENSDARG00000037284, ENSDARG00000113517 3999 1.455 - - 0.724 - - - 0.731 - - prostaglandin E synthase 3a (cytosolic) [Source:ZFIN;Acc:ZDB-GENE-040426-2200]
62. adka ENSDARG00000039429 7670 1.454 - 0.704 - - - - 0.750 - - adenosine kinase a [Source:ZFIN;Acc:ZDB-GENE-030425-3]
63. znf292a ENSDARG00000016763 2253 1.445 - - 0.721 - - - - 0.724 - zinc finger protein 292a [Source:ZFIN;Acc:ZDB-GENE-071004-18]
64. ddost ENSDARG00000037318 10904 1.442 - - - 0.704 0.738 - - - - dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit (non-catalytic) [Source:ZFIN;Acc:ZDB-GENE-040426-2147]
65. rtn3 ENSDARG00000091348 2070 1.437 - 0.704 - - - - 0.733 - - reticulon 3 [Source:ZFIN;Acc:ZDB-GENE-030710-5]
66. paqr3a ENSDARG00000017703, ENSDARG00000117061 2018 1.437 - - 0.724 - - - - 0.713 - progestin and adipoQ receptor family member IIIa [Source:ZFIN;Acc:ZDB-GENE-040426-1667]
67. SMIM19 ENSDARG00000037423, ENSDARG00000110214 886 1.432 - - - - - - 0.708 0.724 - small integral membrane protein 19 [Source:ZFIN;Acc:ZDB-GENE-050913-125]
68. znf185 ENSDARG00000103917 7195 1.419 - 0.702 - - - - - 0.717 - zinc finger protein 185 with LIM domain [Source:ZFIN;Acc:ZDB-GENE-061103-355]
69. CU633910.1 CU633910.1 828 1.402 0.701 - - - - - 0.701 - -
70. nup50 ENSDARG00000017454 4425 0.998 - - - - - - - - 0.998 nucleoporin 50 [Source:ZFIN;Acc:ZDB-GENE-030131-1689]
71. ptrhd1 ENSDARG00000016122 2705 0.994 - - - - - - - - 0.994 peptidyl-tRNA hydrolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081110-2]
72. palld ENSDARG00000040009 2381 0.994 - - - - - - - - 0.994 palladin, cytoskeletal associated protein [Source:ZFIN;Acc:ZDB-GENE-041014-252]
73. rbms2b ENSDARG00000056150, ENSDARG00000115483 2104 0.994 - - - - - - - - 0.994 RNA binding motif, single stranded interacting protein 2b [Source:ZFIN;Acc:ZDB-GENE-040801-51]
74. mrpl12 ENSDARG00000038768 5539 0.994 - - - - - - - - 0.994 mitochondrial ribosomal protein L12 [Source:ZFIN;Acc:ZDB-GENE-050417-187]
75. psma6b ENSDARG00000013966 4410 0.994 - - - - - - - - 0.994 proteasome subunit alpha 6b [Source:ZFIN;Acc:ZDB-GENE-040718-329]
76. pigk ENSDARG00000024479 1386 0.993 - - - - - - - - 0.993 phosphatidylinositol glycan anchor biosynthesis, class K [Source:ZFIN;Acc:ZDB-GENE-040625-162]
77. cdc25 cdc25 3913 0.993 - - - - - - - - 0.993
78. il1rapl1a ENSDARG00000062045, ENSDARG00000115285 1200 0.993 - - - - - - - - 0.993 interleukin 1 receptor accessory protein-like 1a [Source:ZFIN;Acc:ZDB-GENE-061013-249]
79. TMEM254 ENSDARG00000109902 3377 0.993 - - - - - - - - 0.993 transmembrane protein 254 [Source:ZFIN;Acc:ZDB-GENE-040426-1348]
80. arl8bb ENSDARG00000070318 1428 0.993 - - - - - - - - 0.993 ADP-ribosylation factor-like 8Bb [Source:ZFIN;Acc:ZDB-GENE-080516-10]
81. mkln1 ENSDARG00000025576 1122 0.993 - - - - - - - - 0.993 muskelin 1, intracellular mediator containing kelch motifs [Source:ZFIN;Acc:ZDB-GENE-030131-3942]
82. IGLON5 ENSDARG00000022176 1353 0.993 - - - - - - - - 0.993 IgLON family member 5 [Source:HGNC Symbol;Acc:HGNC:34550]
83. SHROOM2 SHROOM2 934 0.993 - - - - - - - - 0.993
84. zgc:162608 ENSDARG00000069375 2881 0.993 - - - - - - - - 0.993 zgc:162608 [Source:ZFIN;Acc:ZDB-GENE-070410-86]
85. kif3cb ENSDARG00000079500 935 0.993 - - - - - - - - 0.993 kinesin family member 3Cb [Source:ZFIN;Acc:ZDB-GENE-080709-4]
86. snapin ENSDARG00000062382 1531 0.993 - - - - - - - - 0.993 SNAP-associated protein [Source:ZFIN;Acc:ZDB-GENE-060503-343]
87. NEDD4 NEDD4 2040 0.993 - - - - - - - - 0.993
88. ATL2 ENSDARG00000057719, ENSDARG00000113378, ENSDARG00000113487 1987 0.993 - - - - - - - - 0.993 atlastin GTPase 2 [Source:ZFIN;Acc:ZDB-GENE-030131-6505]
89. rufy3 ENSDARG00000029692 3031 0.993 - - - - - - - - 0.993 RUN and FYVE domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050327-58]
90. ATP10B ENSDARG00000076230 989 0.993 - - - - - - - - 0.993 ATPase phospholipid transporting 10B [Source:ZFIN;Acc:ZDB-GENE-130530-796]
91. slc37a4a ENSDARG00000038106 1375 0.993 - - - - - - - - 0.993 solute carrier family 37 (glucose-6-phosphate transporter), member 4a [Source:ZFIN;Acc:ZDB-GENE-040426-2230]
92. CT955984.1 ENSDARG00000113577 1482 0.993 - - - - - - - - 0.993
93. si:ch211-262h13.3 ENSDARG00000070898 2094 0.993 - - - - - - - - 0.993 si:ch211-262h13.3 [Source:ZFIN;Acc:ZDB-GENE-050208-532]
94. atg5 ENSDARG00000023396 1726 0.993 - - - - - - - - 0.993 ATG5 autophagy related 5 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-040801-149]
95. asb4 ENSDARG00000034988 1115 0.993 - - - - - - - - 0.993 ankyrin repeat and SOCS box containing 4 [Source:ZFIN;Acc:ZDB-GENE-050417-100]
96. FRMD4A ENSDARG00000042249 2883 0.992 - - - - - - - - 0.992 FERM domain containing 4A [Source:HGNC Symbol;Acc:HGNC:25491]
97. chchd3 chchd3 4139 0.992 - - - - - - - - 0.992
98. pcm1 ENSDARG00000062198, ENSDARG00000112178 2912 0.991 - - - - - - - - 0.991 pericentriolar material 1 [Source:ZFIN;Acc:ZDB-GENE-030131-428]
99. lemd3 ENSDARG00000015824 2868 0.991 - - - - - - - - 0.991 LEM domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-490]
100. nipblb ENSDARG00000061052 6109 0.991 - - - - - - - - 0.991 nipped-B homolog b (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6070]

There are 949 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA