Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmed7

Gene Name Gene ID Reads Annotation
tmed7 ENSDARG00000046022 2435 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]










Genes with expression patterns similar to tmed7

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmed7 ENSDARG00000046022 2435 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane p24 trafficking protein 7 [Source:ZFIN;Acc:ZDB-GENE-040426-2570]
2. vta1 ENSDARG00000013732 6072 3.353 0.826 - - - - - 0.746 0.790 0.991 vesicle (multivesicular body) trafficking 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2154]
3. pnisr ENSDARG00000069855, ENSDARG00000116449 3465 2.523 0.758 - - - - 0.998 0.767 - - PNN-interacting serine/arginine-rich protein [Source:ZFIN;Acc:ZDB-GENE-030131-362]
4. uchl5 ENSDARG00000103404, ENSDARG00000110434 4029 2.491 - 0.865 - - - - 0.708 0.918 - ubiquitin carboxyl-terminal hydrolase L5 [Source:ZFIN;Acc:ZDB-GENE-040426-2051]
5. map3k7 ENSDARG00000020469 2845 2.472 0.889 0.846 - - - - 0.737 - - mitogen-activated protein kinase kinase kinase 7 [Source:ZFIN;Acc:ZDB-GENE-041001-135]
6. TRIM14 TRIM14 1424 2.464 0.800 0.840 - - - 0.824 - - -
7. sumo3b ENSDARG00000035993 3414 2.463 0.861 0.808 - - - - - 0.794 - small ubiquitin-like modifier 3b [Source:ZFIN;Acc:ZDB-GENE-040718-426]
8. ktn1 ENSDARG00000032802 6251 2.448 0.788 - - - - 0.951 0.709 - - kinectin 1 [Source:ZFIN;Acc:ZDB-GENE-030408-4]
9. tet3 ENSDARG00000062646 6672 2.385 - 0.854 - - - - 0.800 0.731 - tet methylcytosine dioxygenase 3 [Source:ZFIN;Acc:ZDB-GENE-060526-109]
10. csnk1da ENSDARG00000008370 3469 2.366 0.701 - - - - - 0.770 0.895 - casein kinase 1, delta a [Source:ZFIN;Acc:ZDB-GENE-030131-825]
11. bckdha ENSDARG00000040555, ENSDARG00000111762 7620 2.339 0.783 - - - - - 0.723 0.833 - branched chain keto acid dehydrogenase E1, alpha polypeptide [Source:ZFIN;Acc:ZDB-GENE-050522-376]
12. prdm9 ENSDARG00000005382, ENSDARG00000110150 572 2.328 0.900 0.728 - - 0.700 - - - - PR domain containing 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1319]
13. clica clica 6206 2.286 0.806 0.715 - - - 0.765 - - -
14. inppl1a ENSDARG00000104222 6256 2.279 0.720 0.761 - - - 0.798 - - - inositol polyphosphate phosphatase-like 1a [Source:ZFIN;Acc:ZDB-GENE-030131-3904]
15. ndufs4 ENSDARG00000052840, ENSDARG00000110036 3441 2.277 0.703 - - - - - 0.782 0.792 - NADH:ubiquinone oxidoreductase subunit S4 [Source:ZFIN;Acc:ZDB-GENE-050522-421]
16. eif4h ENSDARG00000042252 6742 2.272 - - - 0.712 - - 0.712 0.848 - eukaryotic translation initiation factor 4h [Source:ZFIN;Acc:ZDB-GENE-010328-19]
17. lrig1 ENSDARG00000075625 2027 2.22 - 0.736 - 0.719 - - - 0.765 - leucine-rich repeats and immunoglobulin-like domains 1 [Source:ZFIN;Acc:ZDB-GENE-031113-23]
18. mmgt1 ENSDARG00000010553, ENSDARG00000109407 2992 1.994 - - - - - 0.995 - - 0.999 membrane magnesium transporter 1 [Source:ZFIN;Acc:ZDB-GENE-040801-65]
19. kdm1a ENSDARG00000060679 6152 1.972 - - - - - 0.990 - - 0.982 lysine (K)-specific demethylase 1a [Source:ZFIN;Acc:ZDB-GENE-030131-7828]
20. C1QBP ENSDARG00000039887 11186 1.914 - - - - - 0.921 - - 0.993 complement component 1, q subcomponent binding protein [Source:ZFIN;Acc:ZDB-GENE-050417-408]
21. nup155 ENSDARG00000001777 3417 1.899 - - - - - - - 0.901 0.998 nucleoporin 155 [Source:ZFIN;Acc:ZDB-GENE-040426-711]
22. prc1a ENSDARG00000100918 1746 1.882 - - - - - 0.996 - 0.886 - protein regulator of cytokinesis 1a [Source:ZFIN;Acc:ZDB-GENE-020801-3]
23. osgn1 ENSDARG00000052279 5607 1.881 0.889 - - - - 0.992 - - - oxidative stress induced growth inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-864]
24. hddc3 ENSDARG00000020473 2814 1.873 - - - - - - - 0.874 0.999 HD domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-050417-377]
25. axin2 ENSDARG00000100149 4223 1.831 0.840 - - - - 0.991 - - - axin 2 (conductin, axil) [Source:ZFIN;Acc:ZDB-GENE-000403-2]
26. gspt1l ENSDARG00000098627 8381 1.831 - 0.859 - - - 0.972 - - - G1 to S phase transition 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-4009]
27. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.827 - 0.838 - - - 0.989 - - - tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
28. cbx3a ENSDARG00000003860 4922 1.823 - - - - - 0.994 - 0.829 - chromobox homolog 3a (HP1 gamma homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-1158]
29. txnl4a ENSDARG00000036190 2048 1.822 - - - - - 0.997 - 0.825 - thioredoxin-like 4A [Source:ZFIN;Acc:ZDB-GENE-041010-25]
30. mtmr9 ENSDARG00000015860 1339 1.814 - - - - - - 0.815 - 0.999 myotubularin related protein 9 [Source:ZFIN;Acc:ZDB-GENE-040724-223]
31. robo3 ENSDARG00000005645 2818 1.798 - 0.833 - - - 0.965 - - - roundabout, axon guidance receptor, homolog 3 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-000209-4]
32. psmc2 ENSDARG00000020101 8095 1.789 - - - - - 0.988 - 0.801 - proteasome 26S subunit, ATPase 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1327]
33. smim7 ENSDARG00000074848 1260 1.788 - 0.792 - - - 0.996 - - - small integral membrane protein 7 [Source:ZFIN;Acc:ZDB-GENE-060810-180]
34. stip1 ENSDARG00000004906 7742 1.782 - - - - - - 0.787 - 0.995 stress-induced phosphoprotein 1 [Source:ZFIN;Acc:ZDB-GENE-041121-17]
35. ash1l ENSDARG00000070981 2520 1.766 - - - - - - 0.768 - 0.998 ash1 (absent, small, or homeotic)-like (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6101]
36. ptpn21 ENSDARG00000062248 2010 1.765 0.895 - - - - - - 0.870 - protein tyrosine phosphatase, non-receptor type 21 [Source:ZFIN;Acc:ZDB-GENE-080102-4]
37. rpa2 ENSDARG00000037188 4284 1.764 - - - - - 0.998 0.766 - - replication protein A2 [Source:ZFIN;Acc:ZDB-GENE-010131-3]
38. tmem55a 1331 1.761 0.858 - - - - - - 0.903 - transmembrane protein 55A
39. mob4 ENSDARG00000056085 17978 1.757 - 0.794 - - - 0.963 - - - MOB family member 4, phocein [Source:ZFIN;Acc:ZDB-GENE-040801-174]
40. RNF5 ENSDARG00000075606 1730 1.75 0.872 - - - - - - 0.878 - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
41. si:dkey-238o13.4 ENSDARG00000078847 884 1.75 0.877 - - - - - - 0.873 - si:dkey-238o13.4 [Source:ZFIN;Acc:ZDB-GENE-070705-403]
42. si:ch211-198a12.6 ENSDARG00000074624, ENSDARG00000114808 8911 1.743 - 0.769 - - - - - - 0.974 si:ch211-198a12.6 [Source:ZFIN;Acc:ZDB-GENE-030131-1683]
43. ppp1r3ca ENSDARG00000071005, ENSDARG00000111817, ENSDARG00000112962 2641 1.733 - - - - - 0.986 0.747 - - protein phosphatase 1, regulatory subunit 3Ca [Source:ZFIN;Acc:ZDB-GENE-040718-70]
44. cbx5 ENSDARG00000061187 24026 1.727 - - - - - - 0.831 - 0.896 chromobox homolog 5 (HP1 alpha homolog, Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-5553]
45. ISCU ISCU 3648 1.716 0.819 0.897 - - - - - - -
46. fh ENSDARG00000075132 1340 1.716 - - - - - 0.995 0.721 - - fumarate hydratase [Source:ZFIN;Acc:ZDB-GENE-010724-6]
47. zgc:77262 ENSDARG00000044545 5563 1.712 - - - - - 0.991 - 0.721 - zgc:77262 [Source:ZFIN;Acc:ZDB-GENE-040426-1811]
48. ccng2 ENSDARG00000017602 3141 1.711 0.734 - - - - 0.977 - - - cyclin G2 [Source:ZFIN;Acc:ZDB-GENE-021016-1]
49. zgc:162967 zgc:162967 2132 1.708 - 0.709 - - - - - - 0.999
50. dnajc5ab ENSDARG00000004836 2923 1.704 - - - 0.716 - 0.988 - - - DnaJ (Hsp40) homolog, subfamily C, member 5ab [Source:ZFIN;Acc:ZDB-GENE-081021-2]
51. mlst8 ENSDARG00000003167, ENSDARG00000116280 541 1.702 - 0.705 - - - 0.997 - - - MTOR associated protein, LST8 homolog (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-030131-6176]
52. psmg3 ENSDARG00000098391 920 1.701 - - - - - 0.988 0.713 - - proteasome (prosome, macropain) assembly chaperone 3 [Source:ZFIN;Acc:ZDB-GENE-040718-262]
53. BAZ2B BAZ2B 3285 1.698 0.703 - - - - - - - 0.995
54. eif6 ENSDARG00000020232 2744 1.696 - - - - - 0.992 0.704 - - eukaryotic translation initiation factor 6 [Source:ZFIN;Acc:ZDB-GENE-031118-110]
55. TRAK2 ENSDARG00000102471 2258 1.695 0.872 0.823 - - - - - - - trafficking protein, kinesin binding 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7496]
56. birc6 ENSDARG00000074166, ENSDARG00000115931 1972 1.694 0.712 - - - - 0.982 - - - baculoviral IAP repeat containing 6 [Source:ZFIN;Acc:ZDB-GENE-091202-7]
57. llgl1 ENSDARG00000009693 4205 1.693 0.718 - - - - 0.975 - - - lethal giant larvae homolog 1 (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-060825-69]
58. dlg5a ENSDARG00000074059 1834 1.69 0.831 - - - - - - 0.859 - discs, large homolog 5a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-3149]
59. fzd7a ENSDARG00000060004, ENSDARG00000115544 4171 1.688 - - - - - - 0.792 0.896 - frizzled class receptor 7a [Source:ZFIN;Acc:ZDB-GENE-990415-223]
60. MRPL52 ENSDARG00000090568 4402 1.688 0.902 - - 0.786 - - - - - mitochondrial ribosomal protein L52 [Source:ZFIN;Acc:ZDB-GENE-110325-1]
61. sppl2 ENSDARG00000030448 1040 1.687 - 0.822 - - - - - 0.865 - signal peptide peptidase-like 2 [Source:ZFIN;Acc:ZDB-GENE-030131-4265]
62. SERP1_1 ENSDARG00000076223 6668 1.686 - 0.743 - - - 0.943 - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
63. SCML2 ENSDARG00000012949 1310 1.684 0.896 - - - - - - 0.788 - Scm polycomb group protein like 2 [Source:ZFIN;Acc:ZDB-GENE-130530-546]
64. sec22a ENSDARG00000078328 1207 1.683 0.850 0.833 - - - - - - - SEC22 homolog A, vesicle trafficking protein [Source:ZFIN;Acc:ZDB-GENE-030131-3553]
65. akt1s1 ENSDARG00000074667 3795 1.677 - - - - - 0.959 0.718 - - AKT1 substrate 1 (proline-rich) [Source:ZFIN;Acc:ZDB-GENE-030131-482]
66. cnot6l ENSDARG00000054597, ENSDARG00000112672 1586 1.677 - - - - - 0.972 0.705 - - CCR4-NOT transcription complex, subunit 6-like [Source:ZFIN;Acc:ZDB-GENE-050522-302]
67. tmeff1b ENSDARG00000056740 11253 1.674 - - - - - - - 0.712 0.962 transmembrane protein with EGF-like and two follistatin-like domains 1b [Source:ZFIN;Acc:ZDB-GENE-050706-143]
68. CASKIN2_1 CASKIN2_1 2299 1.671 0.770 - - - - - - 0.901 -
69. kctd5 kctd5 13455 1.671 - - - - - - - 0.709 0.962
70. mast4 1164 1.668 - - - 0.788 - - - 0.880 - microtubule associated serine/threonine kinase family member 4, transcript variant X6
71. TNRC6A ENSDARG00000079688 14433 1.658 - - - - - - 0.797 - 0.861 trinucleotide repeat containing 6a [Source:ZFIN;Acc:ZDB-GENE-030131-2519]
72. srp19 ENSDARG00000035699 2624 1.656 0.804 - - - - - - 0.852 - signal recognition particle 19 [Source:ZFIN;Acc:ZDB-GENE-040426-2657]
73. hsd17b12a ENSDARG00000015709 2499 1.654 0.744 - - - - 0.910 - - - hydroxysteroid (17-beta) dehydrogenase 12a [Source:ZFIN;Acc:ZDB-GENE-030131-5628]
74. psmb6 ENSDARG00000002240 8015 1.652 - 0.782 - - - - - 0.870 - proteasome subunit beta 6 [Source:ZFIN;Acc:ZDB-GENE-990415-216]
75. tiam1a ENSDARG00000078430 2482 1.647 0.873 0.774 - - - - - - - T cell lymphoma invasion and metastasis 1a [Source:ZFIN;Acc:ZDB-GENE-080325-1]
76. gnb4b ENSDARG00000115383 7457 1.647 0.886 0.761 - - - - - - - guanine nucleotide binding protein (G protein), beta polypeptide 4b [Source:ZFIN;Acc:ZDB-GENE-041114-167]
77. C6H6orf106 C6H6orf106 2940 1.646 0.893 0.753 - - - - - - -
78. gpcpd1 ENSDARG00000016011 2563 1.644 0.858 0.786 - - - - - - - glycerophosphocholine phosphodiesterase 1 [Source:ZFIN;Acc:ZDB-GENE-060503-472]
79. sp8a ENSDARG00000011870 1075 1.643 0.880 0.763 - - - - - - - sp8 transcription factor a [Source:ZFIN;Acc:ZDB-GENE-030131-9849]
80. yap1 ENSDARG00000068401, ENSDARG00000112952 16365 1.641 0.710 - - - - - - - 0.931 Yes-associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-9710]
81. znf703 ENSDARG00000035563, ENSDARG00000112912 2226 1.631 0.889 0.742 - - - - - - - zinc finger protein 703 [Source:ZFIN;Acc:ZDB-GENE-010717-1]
82. herpud1 ENSDARG00000024314 1207 1.63 0.826 0.804 - - - - - - - homocysteine-inducible, endoplasmic reticulum stress-inducible, ubiquitin-like domain member 1 [Source:ZFIN;Acc:ZDB-GENE-050913-47]
83. tp63 ENSDARG00000044356, ENSDARG00000113627 5686 1.624 - 0.714 - - - 0.910 - - - tumor protein p63 [Source:ZFIN;Acc:ZDB-GENE-030819-1]
84. ZBTB16 ZBTB16 3385 1.623 0.853 0.770 - - - - - - -
85. ccne2 ENSDARG00000098529 4695 1.623 0.888 - - - - - - - 0.735 cyclin E2 [Source:ZFIN;Acc:ZDB-GENE-030131-9689]
86. map2k2a ENSDARG00000006609 856 1.619 0.827 0.792 - - - - - - - mitogen-activated protein kinase kinase 2a [Source:ZFIN;Acc:ZDB-GENE-041027-1]
87. ZC3H12A_1 ZC3H12A_1 558 1.616 0.887 0.729 - - - - - - -
88. lrp5 ENSDARG00000006921 3522 1.615 - - - - - - 0.716 0.899 - low density lipoprotein receptor-related protein 5 [Source:ZFIN;Acc:ZDB-GENE-050518-2]
89. vgll4b ENSDARG00000103730 5266 1.615 - - - - - - 0.715 0.900 - vestigial-like family member 4b [Source:ZFIN;Acc:ZDB-GENE-040426-2445]
90. siah1 ENSDARG00000030871 1590 1.614 - 0.752 - - - - - 0.862 - siah E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-010319-31]
91. psma4 ENSDARG00000045928 5112 1.611 0.868 - - - - - 0.743 - - proteasome subunit alpha 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1932]
92. phc1 ENSDARG00000002971 924 1.609 - - - - - - 0.724 0.885 - polyhomeotic homolog 1 [Source:ZFIN;Acc:ZDB-GENE-081022-39]
93. fam76b ENSDARG00000012432 2722 1.608 0.762 - - - - - - 0.846 - family with sequence similarity 76, member B [Source:ZFIN;Acc:ZDB-GENE-030131-6955]
94. CBFA2T3 ENSDARG00000079012 6799 1.602 0.886 - - - - - - 0.716 - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
95. lrrfip2 ENSDARG00000010400 2633 1.602 - 0.889 - 0.713 - - - - - leucine rich repeat (in FLII) interacting protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-7781]
96. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 1.599 - 0.847 - - - - 0.752 - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
97. nedd8 ENSDARG00000007989 3896 1.597 - 0.776 - - - - 0.821 - - neural precursor cell expressed, developmentally down-regulated 8 [Source:ZFIN;Acc:ZDB-GENE-030616-588]
98. mto1 ENSDARG00000055679 859 1.594 0.889 0.705 - - - - - - - mitochondrial tRNA translation optimization 1 [Source:ZFIN;Acc:ZDB-GENE-070209-253]
99. zbtb4 ENSDARG00000105255 362 1.593 0.870 0.723 - - - - - - - zinc finger and BTB domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-100318-5]
100. akirin2 ENSDARG00000058729 13245 1.589 0.858 - - - - - 0.731 - - akirin 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2944]

There are 1588 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA