Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmed5

Gene Name Gene ID Reads Annotation
tmed5 ENSDARG00000008765 1543 transmembrane p24 trafficking protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1302]










Genes with expression patterns similar to tmed5

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmed5 ENSDARG00000008765 1543 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane p24 trafficking protein 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1302]
2. fbxo9 ENSDARG00000011055 1388 1.606 - 0.819 - - - - 0.787 - - F-box protein 9 [Source:ZFIN;Acc:ZDB-GENE-030131-4194]
3. dnajc5gb ENSDARG00000017687, ENSDARG00000111738 855 1.547 0.787 0.760 - - - - - - - DnaJ (Hsp40) homolog, subfamily C, member 5 gamma b [Source:ZFIN;Acc:ZDB-GENE-040426-1238]
4. eif2b2 ENSDARG00000041397, ENSDARG00000114220 2348 1.488 - - - - - 0.746 0.742 - - eukaryotic translation initiation factor 2B, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-040426-2605]
5. atp5o 10343 1.472 - - - - - 0.737 0.735 - - ATP synthase, H+ transporting, mitochondrial F1 complex, O subunit
6. ppp1r13bb ENSDARG00000009142 1175 1.437 - 0.726 - - - - 0.711 - - protein phosphatase 1, regulatory subunit 13Bb [Source:ZFIN;Acc:ZDB-GENE-030131-4327]
7. scamp3 ENSDARG00000016765 540 0.917 - 0.917 - - - - - - - secretory carrier membrane protein 3 [Source:ZFIN;Acc:ZDB-GENE-041114-33]
8. etnk2 ENSDARG00000070213, ENSDARG00000110347 736 0.905 - 0.905 - - - - - - - ethanolamine kinase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-135]
9. shrprbck1r ENSDARG00000059871 362 0.872 - 0.872 - - - - - - - sharpin and rbck1 related [Source:ZFIN;Acc:ZDB-GENE-080220-52]
10. mtmr14 ENSDARG00000059642 1405 0.869 - 0.869 - - - - - - - myotubularin related protein 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2649]
11. twf1b ENSDARG00000011661 630 0.868 - 0.868 - - - - - - - twinfilin actin-binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-040711-3]
12. ctnnbl1 ENSDARG00000011958 2276 0.859 - - - - - 0.859 - - - catenin, beta like 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1850]
13. dynlt1 ENSDARG00000045909 2451 0.848 - 0.848 - - - - - - - dynein, light chain, Tctex-type 1 [Source:ZFIN;Acc:ZDB-GENE-041210-9]
14. PVRL4 1691 0.838 - 0.838 - - - - - - - poliovirus receptor-related 4
15. fbxl14b ENSDARG00000045801 965 0.837 - 0.837 - - - - - - - F-box and leucine-rich repeat protein 14b [Source:ZFIN;Acc:ZDB-GENE-030131-3556]
16. sap130a ENSDARG00000056924 3156 0.83 0.830 - - - - - - - - Sin3A-associated protein a [Source:ZFIN;Acc:ZDB-GENE-070615-5]
17. TMEM87B ENSDARG00000112581 798 0.829 0.829 - - - - - - - - transmembrane protein 87B [Source:HGNC Symbol;Acc:HGNC:25913]
18. spast ENSDARG00000024933 557 0.827 0.827 - - - - - - - - spastin [Source:ZFIN;Acc:ZDB-GENE-040426-2331]
19. kcnk1a ENSDARG00000045067 743 0.825 0.825 - - - - - - - - potassium channel, subfamily K, member 1a [Source:ZFIN;Acc:ZDB-GENE-070620-26]
20. cyp20a1 ENSDARG00000006040 2570 0.822 - 0.822 - - - - - - - cytochrome P450, family 20, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2646]
21. pipox ENSDARG00000055591 260 0.821 - 0.821 - - - - - - - pipecolic acid oxidase [Source:ZFIN;Acc:ZDB-GENE-110627-2]
22. tex10 ENSDARG00000055885 1229 0.82 - 0.820 - - - - - - - testis expressed 10 [Source:ZFIN;Acc:ZDB-GENE-040426-2827]
23. sufu ENSDARG00000056801 1543 0.819 - 0.819 - - - - - - - suppressor of fused homolog (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-030131-6223]
24. MRPS36 ENSDARG00000079823, ENSDARG00000113427 3694 0.816 - - - - - - 0.816 - - mitochondrial ribosomal protein S36 [Source:ZFIN;Acc:ZDB-GENE-081104-343]
25. FAR2 FAR2 1459 0.815 - 0.815 - - - - - - -
26. ssh2b ENSDARG00000098955 614 0.815 - 0.815 - - - - - - - slingshot protein phosphatase 2b [Source:ZFIN;Acc:ZDB-GENE-081205-4]
27. sp5 sp5 622 0.813 - 0.813 - - - - - - -
28. foxp1b ENSDARG00000014181 2594 0.812 - 0.812 - - - - - - - forkhead box P1b [Source:ZFIN;Acc:ZDB-GENE-041203-1]
29. ryroxd1 227 0.811 - 0.811 - - - - - - - pyridine nucleotide-disulphide oxidoreductase domain 1, transcript variant X1
30. si:ch211-158d24.4 ENSDARG00000093048 281 0.811 - 0.811 - - - - - - - si:ch211-158d24.4 [Source:ZFIN;Acc:ZDB-GENE-081104-141]
31. ap1m1 ENSDARG00000096249 227 0.808 - 0.808 - - - - - - - adaptor related protein complex 1 subunit mu 1 [Source:ZFIN;Acc:ZDB-GENE-110126-1]
32. si:ch211-207j7.2 ENSDARG00000090793 316 0.808 - 0.808 - - - - - - - si:ch211-207j7.2 [Source:ZFIN;Acc:ZDB-GENE-120215-232]
33. cited4a ENSDARG00000035990 2762 0.807 - 0.807 - - - - - - - Cbp/p300-interacting transactivator, with Glu/Asp-rich carboxy-terminal domain, 4a [Source:ZFIN;Acc:ZDB-GENE-030131-7661]
34. si:dkey-118j18.2 ENSDARG00000096457 5293 0.805 - 0.805 - - - - - - - si:dkey-118j18.2 [Source:ZFIN;Acc:ZDB-GENE-030131-8692]
35. wars2 ENSDARG00000011801 134 0.803 - - - - - - 0.803 - - tryptophanyl tRNA synthetase 2, mitochondrial [Source:ZFIN;Acc:ZDB-GENE-050306-26]
36. si:ch211-10d23.5 ENSDARG00000095510 2632 0.802 - 0.802 - - - - - - - si:ch211-10d23.5 [Source:ZFIN;Acc:ZDB-GENE-090313-10]
37. si:dkey-170k13.3 si:dkey-170k13.3 397 0.801 - 0.801 - - - - - - -
38. magoh ENSDARG00000038635, ENSDARG00000109837 2880 0.799 0.799 - - - - - - - - mago homolog, exon junction complex subunit [Source:ZFIN;Acc:ZDB-GENE-041216-1]
39. nr1d2a ENSDARG00000003820 452 0.799 - - - - - - 0.799 - - nuclear receptor subfamily 1, group D, member 2a [Source:ZFIN;Acc:ZDB-GENE-040504-1]
40. PARL 2511 0.799 - 0.799 - - - - - - - presenilin associated rhomboid like
41. kdm6al ENSDARG00000059794 545 0.799 - 0.799 - - - - - - - lysine (K)-specific demethylase 6A, like [Source:ZFIN;Acc:ZDB-GENE-070112-2002]
42. dcaf6 ENSDARG00000078311 1118 0.798 0.798 - - - - - - - - ddb1 and cul4 associated factor 6 [Source:ZFIN;Acc:ZDB-GENE-090206-2]
43. AMBRA1_1 AMBRA1_1 2179 0.798 - 0.798 - - - - - - -
44. rbm24a ENSDARG00000102995 5123 0.797 - - - - - - 0.797 - - RNA binding motif protein 24a [Source:ZFIN;Acc:ZDB-GENE-040628-1]
45. ehd3 ENSDARG00000007869 3238 0.796 - - - - - - 0.796 - - EH-domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-041014-352]
46. foxo3b ENSDARG00000042904 5046 0.794 - 0.794 - - - - - - - forkhead box O3b [Source:ZFIN;Acc:ZDB-GENE-990708-6]
47. cdh17 ENSDARG00000005112 3816 0.794 - 0.794 - - - - - - - cadherin 17, LI cadherin (liver-intestine) [Source:ZFIN;Acc:ZDB-GENE-030910-3]
48. galcb ENSDARG00000016474 615 0.794 - 0.794 - - - - - - - galactosylceramidase b [Source:ZFIN;Acc:ZDB-GENE-040426-2115]
49. pmpca ENSDARG00000102607 1024 0.794 - 0.794 - - - - - - - peptidase (mitochondrial processing) alpha [Source:ZFIN;Acc:ZDB-GENE-030131-5809]
50. fgfbp1 fgfbp1 445 0.793 0.793 - - - - - - - -
51. UQCC2 ENSDARG00000011272 1337 0.792 - 0.792 - - - - - - - ubiquinol-cytochrome c reductase complex assembly factor 2 [Source:ZFIN;Acc:ZDB-GENE-040426-1726]
52. map3k1 ENSDARG00000098405 3043 0.79 - 0.790 - - - - - - - mitogen-activated protein kinase kinase kinase 1, E3 ubiquitin protein ligase [Source:ZFIN;Acc:ZDB-GENE-090313-412]
53. sdha ENSDARG00000016721 8255 0.788 - - - - - - 0.788 - - succinate dehydrogenase complex, subunit A, flavoprotein (Fp) [Source:ZFIN;Acc:ZDB-GENE-040426-874]
54. morc3a ENSDARG00000056679 648 0.786 - 0.786 - - - - - - - MORC family CW-type zinc finger 3a [Source:ZFIN;Acc:ZDB-GENE-030131-1502]
55. brd2a ENSDARG00000022280 3481 0.785 - 0.785 - - - - - - - bromodomain containing 2a [Source:ZFIN;Acc:ZDB-GENE-990415-248]
56. ANO9 ANO9 688 0.785 - 0.785 - - - - - - -
57. mrpl41 ENSDARG00000002264 1756 0.784 - - - - - - 0.784 - - mitochondrial ribosomal protein L41 [Source:ZFIN;Acc:ZDB-GENE-050522-200]
58. DFNA5 DFNA5 201 0.784 0.784 - - - - - - - -
59. Mar-05 Mar-05 2391 0.783 - - - - - - 0.783 - -
60. EML4_1 EML4_1 8736 0.783 - 0.783 - - - - - - -
61. lpcat4 ENSDARG00000035028 167 0.783 - 0.783 - - - - - - - lysophosphatidylcholine acyltransferase 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5777]
62. acadvl ENSDARG00000016687 5329 0.783 - - - - - - 0.783 - - acyl-CoA dehydrogenase very long chain [Source:ZFIN;Acc:ZDB-GENE-030131-899]
63. cnbpb ENSDARG00000070922 14606 0.782 - - - - - - 0.782 - - CCHC-type zinc finger, nucleic acid binding protein b [Source:ZFIN;Acc:ZDB-GENE-030131-7782]
64. esco2 ENSDARG00000014685 1971 0.782 - 0.782 - - - - - - - establishment of sister chromatid cohesion N-acetyltransferase 2 [Source:ZFIN;Acc:ZDB-GENE-050913-156]
65. rab5if ENSDARG00000074790 8807 0.781 - - - - - - 0.781 - - RAB5 interacting factor [Source:ZFIN;Acc:ZDB-GENE-030131-5938]
66. ENSDARG00000058760 ENSDARG00000058760 1076 0.781 - 0.781 - - - - - - -
67. BX322787.1 ENSDARG00000105779 381 0.78 - - - - - - 0.780 - -
68. serpinf1 ENSDARG00000069048 2083 0.78 - - - - - - 0.780 - - serpin peptidase inhibitor, clade F (alpha-2 antiplasmin, pigment epithelium derived factor), member 1 [Source:ZFIN;Acc:ZDB-GENE-040912-2]
69. rreb1b ENSDARG00000042652 2731 0.78 - - - - - 0.780 - - - ras responsive element binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-070912-273]
70. cenph ENSDARG00000094892 416 0.779 - 0.779 - - - - - - - centromere protein H [Source:ZFIN;Acc:ZDB-GENE-081104-340]
71. MYADML2 ENSDARG00000053953 810 0.779 - - - - - - 0.779 - - myeloid-associated differentiation marker-like 2 [Source:ZFIN;Acc:ZDB-GENE-120807-3]
72. usp22 ENSDARG00000040407 398 0.779 - 0.779 - - - - - - - ubiquitin specific peptidase 22 [Source:ZFIN;Acc:ZDB-GENE-060512-211]
73. lnpa ENSDARG00000063646, ENSDARG00000115902 2373 0.778 - - - - - - 0.778 - - limb and neural patterns a [Source:ZFIN;Acc:ZDB-GENE-030131-4960]
74. cacna1sa ENSDARG00000029457 883 0.778 - - - - - - 0.778 - - calcium channel, voltage-dependent, L type, alpha 1S subunit, a [Source:ZFIN;Acc:ZDB-GENE-090514-1]
75. cog2 ENSDARG00000004037 462 0.777 - - - - - - 0.777 - - component of oligomeric golgi complex 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2671]
76. CDIP1 ENSDARG00000076118 1294 0.777 - 0.777 - - - - - - - cell death-inducing p53 target 1 [Source:ZFIN;Acc:ZDB-GENE-070720-18]
77. CU570791.5 CU570791.5 872 0.776 - 0.776 - - - - - - -
78. ENSDARG00000058255 ENSDARG00000058255 1715 0.776 - 0.776 - - - - - - -
79. tmem30ab ENSDARG00000043555 1344 0.775 - - - - - 0.775 - - - transmembrane protein 30Ab [Source:ZFIN;Acc:ZDB-GENE-030131-5884]
80. sdhdb ENSDARG00000030139 9761 0.775 - - - - - 0.775 - - - succinate dehydrogenase complex, subunit D, integral membrane protein b [Source:ZFIN;Acc:ZDB-GENE-040822-17]
81. stk17a ENSDARG00000074715 528 0.775 - - - - - - 0.775 - - serine/threonine kinase 17a [Source:ZFIN;Acc:ZDB-GENE-030131-5556]
82. txnipb ENSDARG00000070000 2365 0.775 - - - - - - 0.775 - - thioredoxin interacting protein b [Source:ZFIN;Acc:ZDB-GENE-040917-1]
83. abhd2a ENSDARG00000025797 312 0.774 - 0.774 - - - - - - - abhydrolase domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-040426-784]
84. AL928724.1 ENSDARG00000097525 421 0.774 - 0.774 - - - - - - -
85. ptdss1 ptdss1 1143 0.774 - 0.774 - - - - - - -
86. fat1 fat1 3934 0.774 - - - - - - 0.774 - -
87. nt5c1bb ENSDARG00000033742 1248 0.773 - 0.773 - - - - - - - 5'-nucleotidase, cytosolic IB b [Source:ZFIN;Acc:ZDB-GENE-030131-7205]
88. ptenb ENSDARG00000056623 5783 0.773 - 0.773 - - - - - - - phosphatase and tensin homolog B [Source:ZFIN;Acc:ZDB-GENE-030616-47]
89. C11H6orf120 C11H6orf120 824 0.773 - - - - - - 0.773 - -
90. fam118b ENSDARG00000078983 1822 0.773 - 0.773 - - - - - - - family with sequence similarity 118, member B [Source:ZFIN;Acc:ZDB-GENE-060810-6]
91. ercc6l ENSDARG00000002479 1535 0.772 0.772 - - - - - - - - excision repair cross-complementation group 6-like [Source:ZFIN;Acc:ZDB-GENE-060531-56]
92. dhtkd1 ENSDARG00000016415 527 0.771 - - - - - - 0.771 - - dehydrogenase E1 and transketolase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041212-44]
93. mau2 ENSDARG00000042056 2378 0.771 - 0.771 - - - - - - - MAU2 sister chromatid cohesion factor [Source:ZFIN;Acc:ZDB-GENE-050522-383]
94. cdkn1ba ENSDARG00000029018 1431 0.77 0.770 - - - - - - - - cyclin-dependent kinase inhibitor 1Ba [Source:ZFIN;Acc:ZDB-GENE-040812-3]
95. RNF5 ENSDARG00000075606 1730 0.77 - 0.770 - - - - - - - ring finger protein 5 [Source:HGNC Symbol;Acc:HGNC:10068]
96. hhip ENSDARG00000060397, ENSDARG00000111482, ENSDARG00000111668 3025 0.77 - - - - - - 0.770 - - hedgehog interacting protein [Source:ZFIN;Acc:ZDB-GENE-030131-4827]
97. WIPF3 WIPF3 804 0.77 - - - - - 0.770 - - -
98. HID1 HID1 282 0.77 - 0.770 - - - - - - -
99. spag6 ENSDARG00000020158 218 0.77 - 0.770 - - - - - - - sperm associated antigen 6 [Source:ZFIN;Acc:ZDB-GENE-040704-53]
100. CR848664.2 CR848664.2 876 0.77 - 0.770 - - - - - - -

There are 416 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA