Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmed1b

Gene Name Gene ID Reads Annotation
tmed1b ENSDARG00000017255 2238 transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]










Genes with expression patterns similar to tmed1b

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmed1b ENSDARG00000017255 2238 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane p24 trafficking protein 1b [Source:ZFIN;Acc:ZDB-GENE-070112-1112]
2. cltcb ENSDARG00000090716 5544 2.478 0.962 0.772 - - - - 0.744 - - clathrin, heavy chain b (Hc) [Source:ZFIN;Acc:ZDB-GENE-050227-12]
3. chd2 ENSDARG00000060687 3832 2.426 0.948 0.739 - - - 0.739 - - - chromodomain helicase DNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050419-256]
4. TMEM150A_2 TMEM150A_2 739 1.847 0.984 - - - - 0.863 - - -
5. amfr 774 1.837 0.962 0.875 - - - - - - - autocrine motility factor receptor, E3 ubiquitin protein ligase a, transcript variant X1
6. cpped1 ENSDARG00000031968, ENSDARG00000112438 693 1.816 0.983 0.833 - - - - - - - calcineurin-like phosphoesterase domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041114-118]
7. sqrdl 1598 1.803 0.952 0.851 - - - - - - - sulfide quinone reductase-like (yeast), transcript variant X2
8. ercc4 ENSDARG00000014161 2167 1.79 0.984 0.806 - - - - - - - excision repair cross-complementation group 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5533]
9. chaf1a ENSDARG00000062152, ENSDARG00000114749 5342 1.778 0.972 - - - - - 0.806 - - chromatin assembly factor 1, subunit A (p150) [Source:ZFIN;Acc:ZDB-GENE-030131-5366]
10. ppp2r2a ppp2r2a 5785 1.753 0.976 - - - - - 0.777 - -
11. cant1a ENSDARG00000012192 1324 1.747 0.972 0.775 - - - - - - - calcium activated nucleotidase 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2441]
12. BX682552.2 BX682552.2 1427 1.714 0.985 - - - - - 0.729 - -
13. dusp1 ENSDARG00000100515 2338 1.711 0.973 - - - - - 0.738 - - dual specificity phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2018]
14. galk1 ENSDARG00000028088 540 1.71 0.951 - - - - 0.759 - - - galactokinase 1 [Source:ZFIN;Acc:ZDB-GENE-041010-79]
15. ssrp1a ENSDARG00000037397, ENSDARG00000116441 3999 1.71 0.979 0.731 - - - - - - - structure specific recognition protein 1a [Source:ZFIN;Acc:ZDB-GENE-031118-9]
16. tmem106bb ENSDARG00000035949, ENSDARG00000113700 1415 1.709 0.987 - - - - - 0.722 - - transmembrane protein 106Bb [Source:ZFIN;Acc:ZDB-GENE-050913-37]
17. tob1b ENSDARG00000021372 7048 1.695 0.944 0.751 - - - - - - - transducer of ERBB2, 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2151]
18. azin1a ENSDARG00000052789 387 1.634 - 0.871 - - - - 0.763 - - antizyme inhibitor 1a [Source:ZFIN;Acc:ZDB-GENE-050417-20]
19. zgc:163098 ENSDARG00000078911, ENSDARG00000111691, ENSDARG00000113714, ENSDARG00000115110 1802 1.633 - 0.878 - - - - 0.755 - - zgc:163098 [Source:ZFIN;Acc:ZDB-GENE-070410-141]
20. si:ch1073-392o20.2 ENSDARG00000102599 4172 1.612 0.811 0.801 - - - - - - - si:ch1073-392o20.2 [Source:ZFIN;Acc:ZDB-GENE-091204-431]
21. rnf114 ENSDARG00000009886 725 1.586 - 0.798 - - - - 0.788 - - ring finger protein 114 [Source:ZFIN;Acc:ZDB-GENE-040813-1]
22. etnppl ENSDARG00000035544 440 1.585 - 0.794 - - - 0.791 - - - ethanolamine-phosphate phospho-lyase [Source:ZFIN;Acc:ZDB-GENE-040426-1133]
23. srp14 ENSDARG00000115987 3575 1.563 - - - - - 0.753 0.810 - - signal recognition particle 14 [Source:ZFIN;Acc:ZDB-GENE-050913-131]
24. atad1a ENSDARG00000023267 155 1.56 - 0.788 - - - 0.772 - - - ATPase family, AAA domain containing 1a [Source:ZFIN;Acc:ZDB-GENE-030616-593]
25. slc35e4 ENSDARG00000009459, ENSDARG00000109666 114 1.558 - 0.808 - - - 0.750 - - - solute carrier family 35, member E4 [Source:ZFIN;Acc:ZDB-GENE-050417-407]
26. adprm ENSDARG00000026090 91 1.543 - 0.777 - - - 0.766 - - - ADP-ribose/CDP-alcohol diphosphatase, manganese-dependent [Source:ZFIN;Acc:ZDB-GENE-040426-1406]
27. SGPP1 ENSDARG00000060534 1802 1.522 - 0.807 - - - 0.715 - - - sphingosine-1-phosphate phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-090319-2]
28. afap1l1a_1 ENSDARG00000089162, ENSDARG00000116849, ENSDARG00000117182 383 1.517 - 0.743 - - - 0.774 - - - actin filament associated protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-050913-76]
29. roraa ENSDARG00000031768 278 1.51 - 0.775 - - - 0.735 - - - RAR-related orphan receptor A, paralog a [Source:ZFIN;Acc:ZDB-GENE-060306-2]
30. cyp24a1 ENSDARG00000103277 181 1.495 - 0.763 - - - 0.732 - - - cytochrome P450, family 24, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-060825-1]
31. AL954697.2 AL954697.2 1809 1.493 - 0.752 - - - - 0.741 - -
32. PLEKHG3 72 1.489 - 0.721 - - - 0.768 - - - pleckstrin homology and RhoGEF domain containing G3, transcript variant X5
33. PHF13 ENSDARG00000102023 1102 1.488 0.719 - - - - 0.769 - - - PHD finger protein 13 [Source:ZFIN;Acc:ZDB-GENE-121113-2]
34. slc35e1 ENSDARG00000011945 201 1.48 - - - - - 0.741 0.739 - - solute carrier family 35, member E1 [Source:ZFIN;Acc:ZDB-GENE-040426-2033]
35. ppip5k2 ENSDARG00000078441 1074 1.479 - - - - - 0.748 0.731 - - diphosphoinositol pentakisphosphate kinase 2 [Source:ZFIN;Acc:ZDB-GENE-091204-125]
36. napa napa 4444 1.479 - 0.762 - - - 0.717 - - -
37. bcl2_1 bcl2_1 1185 1.473 - 0.769 - - - - 0.704 - -
38. il6st ENSDARG00000104693 55 1.471 - 0.757 - - - 0.714 - - - interleukin 6 signal transducer [Source:ZFIN;Acc:ZDB-GENE-080104-6]
39. si:dkey-67c22.2 ENSDARG00000055389 6410 1.465 - - - - - 0.748 0.717 - - si:dkey-67c22.2 [Source:ZFIN;Acc:ZDB-GENE-030131-5845]
40. hmbox1a ENSDARG00000027082 2569 1.46 - - - - - 0.755 - - 0.705 homeobox containing 1a [Source:ZFIN;Acc:ZDB-GENE-050913-89]
41. atp5j 4272 1.458 - 0.748 - - - - 0.710 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit F6, transcript variant X2
42. lrpap1 ENSDARG00000033604, ENSDARG00000116453 1389 1.456 0.705 0.751 - - - - - - - low density lipoprotein receptor-related protein associated protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-5871]
43. GIGYF1_1 GIGYF1_1 1865 1.438 - 0.726 - - - 0.712 - - -
44. gtpbp4 ENSDARG00000018961 5323 0.991 0.991 - - - - - - - - GTP binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-030131-5982]
45. hoxb7a ENSDARG00000056030 1212 0.99 0.990 - - - - - - - - homeobox B7a [Source:ZFIN;Acc:ZDB-GENE-000329-2]
46. dnajc11 1939 0.989 0.989 - - - - - - - - DnaJ heat shock protein family (Hsp40) member C11
47. ryr1a ENSDARG00000011422 2377 0.988 0.988 - - - - - - - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
48. sema4e ENSDARG00000052997 607 0.988 0.988 - - - - - - - - semaphorin 4e [Source:ZFIN;Acc:ZDB-GENE-990715-7]
49. fbxo45 ENSDARG00000071492, ENSDARG00000111553 732 0.988 0.988 - - - - - - - - F-box protein 45 [Source:ZFIN;Acc:ZDB-GENE-040426-1450]
50. CU571336.1 ENSDARG00000099892 2164 0.988 0.988 - - - - - - - -
51. eef2a.1 ENSDARG00000042094 1781 0.987 0.987 - - - - - - - - eukaryotic translation elongation factor 2a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-050522-500]
52. phf12a ENSDARG00000074303 1025 0.987 0.987 - - - - - - - - PHD finger protein 12a [Source:ZFIN;Acc:ZDB-GENE-030131-3876]
53. ep300b ENSDARG00000061108 5173 0.987 0.987 - - - - - - - - E1A binding protein p300 b [Source:ZFIN;Acc:ZDB-GENE-080403-15]
54. cbx3b ENSDARG00000092158 1976 0.987 0.987 - - - - - - - - chromobox homolog 3b [Source:ZFIN;Acc:ZDB-GENE-070628-2]
55. mocs2 ENSDARG00000077202, ENSDARG00000114592, ENSDARG00000114882 942 0.987 0.987 - - - - - - - - molybdenum cofactor synthesis 2 [Source:ZFIN;Acc:ZDB-GENE-110411-53]
56. ino80db ENSDARG00000062226 504 0.987 0.987 - - - - - - - - INO80 complex subunit Db [Source:ZFIN;Acc:ZDB-GENE-070112-2072]
57. HDAC5 ENSDARG00000075139 1287 0.987 0.987 - - - - - - - - histone deacetylase 5 [Source:ZFIN;Acc:ZDB-GENE-121219-3]
58. itm2ca ENSDARG00000043448 1265 0.986 0.986 - - - - - - - - integral membrane protein 2Ca [Source:ZFIN;Acc:ZDB-GENE-040718-284]
59. si:ch73-367f21.4 ENSDARG00000071097 862 0.986 0.986 - - - - - - - - si:ch73-367f21.4 [Source:ZFIN;Acc:ZDB-GENE-120214-27]
60. atp5ia 4773 0.986 0.986 - - - - - - - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit Ea
61. apip ENSDARG00000003132 1212 0.986 0.986 - - - - - - - - APAF1 interacting protein [Source:ZFIN;Acc:ZDB-GENE-040912-128]
62. whsc1 1701 0.986 0.986 - - - - - - - - Wolf-Hirschhorn syndrome candidate 1
63. wdr3 ENSDARG00000011079 1403 0.986 0.986 - - - - - - - - WD repeat domain 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9830]
64. tctex1d1 ENSDARG00000103545 409 0.986 0.986 - - - - - - - - Tctex1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-49]
65. cep170a cep170a 652 0.986 0.986 - - - - - - - -
66. ncor1 ENSDARG00000035285, ENSDARG00000113129 4234 0.986 0.986 - - - - - - - - nuclear receptor corepressor 1 [Source:ZFIN;Acc:ZDB-GENE-040426-993]
67. cilp ENSDARG00000053362 1429 0.985 0.985 - - - - - - - - cartilage intermediate layer protein, nucleotide pyrophosphohydrolase [Source:ZFIN;Acc:ZDB-GENE-050208-76]
68. esrp2 ENSDARG00000018814, ENSDARG00000115061 1198 0.985 0.985 - - - - - - - - epithelial splicing regulatory protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-9824]
69. ELMSAN1_1 ELMSAN1_1 1337 0.985 0.985 - - - - - - - -
70. atg4b ENSDARG00000052104 758 0.985 0.985 - - - - - - - - autophagy related 4B, cysteine peptidase [Source:ZFIN;Acc:ZDB-GENE-040917-3]
71. taf7 ENSDARG00000019572 1305 0.985 0.985 - - - - - - - - TAF7 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-020419-18]
72. RNF214 RNF214 816 0.985 0.985 - - - - - - - -
73. gbx1 ENSDARG00000071418 871 0.985 0.985 - - - - - - - - gastrulation brain homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-020117-2]
74. jph1a ENSDARG00000058603 2852 0.985 0.985 - - - - - - - - junctophilin 1a [Source:ZFIN;Acc:ZDB-GENE-040724-233]
75. pfkfb4l pfkfb4l 2539 0.985 0.985 - - - - - - - -
76. zgc:86598 ENSDARG00000014222 3664 0.985 0.985 - - - - - - - - zgc:86598 [Source:ZFIN;Acc:ZDB-GENE-040625-181]
77. lyz ENSDARG00000057789, ENSDARG00000109290, ENSDARG00000114098 5991 0.985 0.985 - - - - - - - - lysozyme [Source:ZFIN;Acc:ZDB-GENE-020515-2]
78. slc25a5 ENSDARG00000092553 626 0.985 0.985 - - - - - - - - solute carrier family 25 (mitochondrial carrier; adenine nucleotide translocator), member 5 [Source:ZFIN;Acc:ZDB-GENE-020419-9]
79. nr2f1b ENSDARG00000017168 1487 0.984 0.984 - - - - - - - - nuclear receptor subfamily 2, group F, member 1b [Source:ZFIN;Acc:ZDB-GENE-040426-1438]
80. bbs5 ENSDARG00000039827 211 0.984 0.984 - - - - - - - - Bardet-Biedl syndrome 5 [Source:ZFIN;Acc:ZDB-GENE-040426-1083]
81. sgk2b ENSDARG00000006598 1039 0.984 0.984 - - - - - - - - serum/glucocorticoid regulated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-060929-44]
82. C7H16orf87 C7H16orf87 5197 0.984 0.984 - - - - - - - -
83. mnx1 ENSDARG00000035984, ENSDARG00000109419 1014 0.984 0.984 - - - - - - - - motor neuron and pancreas homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-040409-1]
84. sh3gl3b ENSDARG00000007302 573 0.984 0.984 - - - - - - - - SH3-domain GRB2-like 3b [Source:ZFIN;Acc:ZDB-GENE-040121-4]
85. vars ENSDARG00000044575 1367 0.984 0.984 - - - - - - - - valyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-010601-1]
86. slc22a2 ENSDARG00000030530 313 0.984 0.984 - - - - - - - - solute carrier family 22 (organic cation transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2167]
87. tmem194a tmem194a 745 0.984 0.984 - - - - - - - -
88. zyx ENSDARG00000075733 429 0.984 0.984 - - - - - - - - zyxin [Source:ZFIN;Acc:ZDB-GENE-070928-18]
89. SUSD4 ENSDARG00000026335 195 0.984 0.984 - - - - - - - - sushi domain containing 4 [Source:ZFIN;Acc:ZDB-GENE-110511-1]
90. gapvd1 ENSDARG00000090183, ENSDARG00000113177 611 0.984 0.984 - - - - - - - - GTPase activating protein and VPS9 domains 1 [Source:ZFIN;Acc:ZDB-GENE-040718-117]
91. daam2 ENSDARG00000028393 226 0.984 0.984 - - - - - - - - dishevelled associated activator of morphogenesis 2 [Source:ZFIN;Acc:ZDB-GENE-070709-1]
92. AL929007.1 AL929007.1 3649 0.984 0.984 - - - - - - - -
93. mta3 ENSDARG00000054903, ENSDARG00000113436 353 0.983 0.983 - - - - - - - - metastasis associated 1 family, member 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6485]
94. tarbp2 ENSDARG00000070471 1946 0.983 0.983 - - - - - - - - TAR (HIV) RNA binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8085]
95. rnf168 ENSDARG00000112483 594 0.983 0.983 - - - - - - - - ring finger protein 168 [Source:ZFIN;Acc:ZDB-GENE-030131-6013]
96. chst14 ENSDARG00000043011 345 0.983 0.983 - - - - - - - - carbohydrate (N-acetylgalactosamine 4-0) sulfotransferase 14 [Source:ZFIN;Acc:ZDB-GENE-040401-3]
97. dhcr7 ENSDARG00000103226 673 0.983 0.983 - - - - - - - - 7-dehydrocholesterol reductase [Source:ZFIN;Acc:ZDB-GENE-030912-9]
98. myo6a ENSDARG00000044016 847 0.983 0.983 - - - - - - - - myosin VIa [Source:ZFIN;Acc:ZDB-GENE-040819-2]
99. cylda ENSDARG00000060058 768 0.983 0.983 - - - - - - - - cylindromatosis (turban tumor syndrome), a [Source:ZFIN;Acc:ZDB-GENE-061108-2]
100. dcp1b ENSDARG00000045484 534 0.983 0.983 - - - - - - - - decapping mRNA 1B [Source:ZFIN;Acc:ZDB-GENE-040819-1]

There are 1369 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA