Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmco3

Gene Name Gene ID Reads Annotation
tmco3 ENSDARG00000075108 368 transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]










Genes with expression patterns similar to tmco3

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmco3 ENSDARG00000075108 368 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane and coiled-coil domains 3 [Source:ZFIN;Acc:ZDB-GENE-071030-1]
2. DHRS2 DHRS2 585 1.782 - - - - - 0.799 0.983 - -
3. C10H12orf44 C10H12orf44 787 1.741 - 0.751 - - - - 0.990 - -
4. TAF2 ENSDARG00000102307 1401 1.733 - 0.770 - - - - 0.963 - - TAF2 RNA polymerase II, TATA box binding protein (TBP)-associated factor [Source:ZFIN;Acc:ZDB-GENE-030131-3207]
5. si:ch211-198d23.1 ENSDARG00000092574 104 1.725 - 0.730 - - - - 0.995 - - si:ch211-198d23.1 [Source:ZFIN;Acc:ZDB-GENE-081104-163]
6. stambpa ENSDARG00000054501 568 1.722 - - - - - 0.732 0.990 - - STAM binding protein a [Source:ZFIN;Acc:ZDB-GENE-040426-1551]
7. ciao1 ENSDARG00000059212 1222 1.688 - 0.701 - - - - 0.987 - - cytosolic iron-sulfur assembly component 1 [Source:ZFIN;Acc:ZDB-GENE-040426-839]
8. tmem106a ENSDARG00000045075, ENSDARG00000116020 727 1.686 - - - - - 0.749 0.937 - - transmembrane protein 106A [Source:ZFIN;Acc:ZDB-GENE-030131-5129]
9. rps6kb1a ENSDARG00000018399 627 1.453 - 0.710 - - - 0.743 - - - ribosomal protein S6 kinase b, polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-091113-52]
10. irf8 ENSDARG00000056407 85 0.999 - - - - - - 0.999 - - interferon regulatory factor 8 [Source:ZFIN;Acc:ZDB-GENE-040718-367]
11. bin2b ENSDARG00000010255 2649 0.998 - - - - - - 0.998 - - bridging integrator 2b [Source:ZFIN;Acc:ZDB-GENE-030131-5598]
12. usp43a ENSDARG00000103494, ENSDARG00000111546, ENSDARG00000112146 211 0.997 - - - - - - 0.997 - - ubiquitin specific peptidase 43a [Source:ZFIN;Acc:ZDB-GENE-100211-1]
13. baz2a ENSDARG00000102974 266 0.997 - - - - - - 0.997 - - bromodomain adjacent to zinc finger domain, 2A [Source:ZFIN;Acc:ZDB-GENE-041010-202]
14. plekhh1 ENSDARG00000053835 2123 0.997 - - - - - - 0.997 - - pleckstrin homology domain containing, family H (with MyTH4 domain) member 1 [Source:ZFIN;Acc:ZDB-GENE-061219-1]
15. mpdu1b ENSDARG00000040265 1968 0.997 - - - - - - 0.997 - - mannose-P-dolichol utilization defect 1b [Source:ZFIN;Acc:ZDB-GENE-040625-135]
16. PLXNB2 PLXNB2 99 0.997 - - - - - - 0.997 - -
17. asb3 ENSDARG00000005246 317 0.997 - - - - - - 0.997 - - ankyrin repeat and SOCS box containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-6142]
18. asb6 ENSDARG00000007125 389 0.997 - - - - - - 0.997 - - ankyrin repeat and SOCS box containing 6 [Source:ZFIN;Acc:ZDB-GENE-050522-338]
19. EXO5 ENSDARG00000042727, ENSDARG00000111772 282 0.997 - - - - - - 0.997 - - exonuclease 5 [Source:ZFIN;Acc:ZDB-GENE-051113-108]
20. SLITRK6 ENSDARG00000098769 217 0.997 - - - - - - 0.997 - - SLIT and NTRK-like family, member 6 [Source:ZFIN;Acc:ZDB-GENE-030131-2816]
21. socs3a ENSDARG00000025428 349 0.997 - - - - - - 0.997 - - suppressor of cytokine signaling 3a [Source:ZFIN;Acc:ZDB-GENE-030131-7349]
22. kbtbd7 ENSDARG00000078001 367 0.997 - - - - - - 0.997 - - kelch repeat and BTB (POZ) domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-070912-204]
23. BX324179.3 BX324179.3 326 0.997 - - - - - - 0.997 - -
24. PSD PSD 367 0.997 - - - - - - 0.997 - -
25. lppr4a lppr4a 141 0.997 - - - - - - 0.997 - -
26. sult3st1 ENSDARG00000009885 218 0.997 - - - - - - 0.997 - - sulfotransferase family 3, cytosolic sulfotransferase 1 [Source:ZFIN;Acc:ZDB-GENE-061207-52]
27. dennd5b ENSDARG00000003789 1152 0.997 - - - - - - 0.997 - - DENN/MADD domain containing 5B [Source:ZFIN;Acc:ZDB-GENE-030131-2248]
28. zgc:173962 zgc:173962 67 0.997 - - - - - - 0.997 - -
29. PRR5 PRR5 630 0.997 - - - - - - 0.997 - -
30. si:ch211-51o18.2 si:ch211-51o18.2 111 0.997 - - - - - - 0.997 - -
31. znf687a ENSDARG00000102774 393 0.997 - - - - - - 0.997 - - zinc finger protein 687a [Source:ZFIN;Acc:ZDB-GENE-100922-32]
32. zgc:136763 zgc:136763 190 0.996 - - - - - - 0.996 - -
33. dnajb9a ENSDARG00000052072 578 0.996 - - - - - - 0.996 - - DnaJ (Hsp40) homolog, subfamily B, member 9a [Source:ZFIN;Acc:ZDB-GENE-050626-115]
34. tbccd1 ENSDARG00000056886, ENSDARG00000114427 1389 0.996 - - - - - - 0.996 - - TBCC domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-041210-222]
35. zgc:63691 zgc:63691 180 0.996 - - - - - - 0.996 - -
36. BX957278.1 ENSDARG00000010940 317 0.996 - - - - - - 0.996 - -
37. zgc:171759_5 ENSDARG00000100259, ENSDARG00000109737, ENSDARG00000111964, ENSDARG00000114195, ENSDARG00000115938 274 0.996 - - - - - - 0.996 - - zgc:171759 [Source:ZFIN;Acc:ZDB-GENE-071004-32]
38. PHYKPL ENSDARG00000040566 435 0.996 - - - - - - 0.996 - - 5-phosphohydroxy-L-lysine phospho-lyase [Source:ZFIN;Acc:ZDB-GENE-051127-33]
39. PDZD8 ENSDARG00000088699 844 0.996 - - - - - - 0.996 - - PDZ domain containing 8 [Source:ZFIN;Acc:ZDB-GENE-110310-2]
40. cul1b ENSDARG00000007691 719 0.996 - - - - - - 0.996 - - cullin 1b [Source:ZFIN;Acc:ZDB-GENE-040426-2887]
41. AMDHD1 ENSDARG00000007366 89 0.996 - - - - - - 0.996 - - amidohydrolase domain containing 1 [Source:HGNC Symbol;Acc:HGNC:28577]
42. plxna4 ENSDARG00000019328 782 0.996 - - - - - - 0.996 - - plexin A4 [Source:ZFIN;Acc:ZDB-GENE-030131-4663]
43. pan3 ENSDARG00000031637, ENSDARG00000111004 613 0.996 - - - - - - 0.996 - - poly(A) specific ribonuclease subunit PAN3 [Source:ZFIN;Acc:ZDB-GENE-070928-13]
44. PRKD3 ENSDARG00000079967 192 0.996 - - - - - - 0.996 - - protein kinase D3 [Source:ZFIN;Acc:ZDB-GENE-130530-880]
45. ZNF337_10 ZNF337_10 183 0.996 - - - - - - 0.996 - -
46. prim1 ENSDARG00000040163 909 0.996 - - - - - - 0.996 - - DNA primase subunit 1 [Source:ZFIN;Acc:ZDB-GENE-990603-6]
47. si:ch73-108h4.3 si:ch73-108h4.3 193 0.995 - - - - - - 0.995 - -
48. prdm5 ENSDARG00000006288 472 0.995 - - - - - - 0.995 - - PR domain containing 5 [Source:ZFIN;Acc:ZDB-GENE-040708-1]
49. FBXO31 ENSDARG00000062195 753 0.995 - - - - - - 0.995 - - F-box protein 31 [Source:ZFIN;Acc:ZDB-GENE-070628-4]
50. ICT1 356 0.995 - - - - - - 0.995 - - immature colon carcinoma transcript 1
51. armc1l ENSDARG00000020887 1219 0.995 - - - - - - 0.995 - - armadillo repeat containing 1, like [Source:ZFIN;Acc:ZDB-GENE-030131-9819]
52. VPS37C ENSDARG00000031836 906 0.995 - - - - - - 0.995 - - vacuolar protein sorting 37 homolog C (S. cerevisiae) [Source:ZFIN;Acc:ZDB-GENE-061110-126]
53. mob2b ENSDARG00000012005 395 0.995 - - - - - - 0.995 - - MOB kinase activator 2b [Source:ZFIN;Acc:ZDB-GENE-060616-319]
54. zdhhc5a ENSDARG00000016263 625 0.995 - - - - - - 0.995 - - zinc finger, DHHC-type containing 5a [Source:ZFIN;Acc:ZDB-GENE-090312-92]
55. phf21ab ENSDARG00000021378 1706 0.995 - - - - - - 0.995 - - PHD finger protein 21Ab [Source:ZFIN;Acc:ZDB-GENE-030131-6456]
56. illr4 ENSDARG00000008075 164 0.995 - - - - - - 0.995 - - immune-related, lectin-like receptor 4 [Source:ZFIN;Acc:ZDB-GENE-050311-5]
57. ctdnep1a ENSDARG00000016519, ENSDARG00000115280 596 0.995 - - - - - - 0.995 - - CTD nuclear envelope phosphatase 1a [Source:ZFIN;Acc:ZDB-GENE-041114-177]
58. tmem203 ENSDARG00000104996 1182 0.995 - - - - - - 0.995 - - transmembrane protein 203 [Source:ZFIN;Acc:ZDB-GENE-040718-225]
59. zdhhc3 zdhhc3 152 0.995 - - - - - - 0.995 - -
60. ERRFI1 ERRFI1 664 0.995 - - - - - - 0.995 - -
61. nrg2a ENSDARG00000077818 854 0.995 - - - - - - 0.995 - - neuregulin 2a [Source:ZFIN;Acc:ZDB-GENE-070615-10]
62. unk ENSDARG00000000935 353 0.995 - - - - - - 0.995 - - unkempt family zinc finger [Source:ZFIN;Acc:ZDB-GENE-040426-707]
63. igfbp3 ENSDARG00000099144 269 0.995 - - - - - - 0.995 - - insulin-like growth factor binding protein 3 [Source:ZFIN;Acc:ZDB-GENE-040412-1]
64. OCRL ENSDARG00000078106, ENSDARG00000115715, ENSDARG00000117019 317 0.995 - - - - - - 0.995 - - oculocerebrorenal syndrome of Lowe [Source:ZFIN;Acc:ZDB-GENE-061110-61]
65. TMEM184B TMEM184B 1280 0.995 - - - - - - 0.995 - -
66. dhodh ENSDARG00000051889 401 0.995 - - - - - - 0.995 - - dihydroorotate dehydrogenase [Source:ZFIN;Acc:ZDB-GENE-030131-3157]
67. fgfr3 ENSDARG00000004782, ENSDARG00000114756 1791 0.994 - - - - - - 0.994 - - fibroblast growth factor receptor 3 [Source:ZFIN;Acc:ZDB-GENE-000816-1]
68. prkaa1 ENSDARG00000060596 1448 0.994 - - - - - - 0.994 - - protein kinase, AMP-activated, alpha 1 catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-030325-1]
69. zgc:153372 ENSDARG00000068967 358 0.994 - - - - - - 0.994 - - zgc:153372 [Source:ZFIN;Acc:ZDB-GENE-060929-680]
70. CABZ01068263.1 CABZ01068263.1 712 0.994 - - - - - - 0.994 - -
71. dhdds ENSDARG00000039851 1135 0.994 - - - - - - 0.994 - - dehydrodolichyl diphosphate synthase [Source:ZFIN;Acc:ZDB-GENE-040426-2236]
72. agk ENSDARG00000009837, ENSDARG00000113514 811 0.994 - - - - - - 0.994 - - acylglycerol kinase [Source:ZFIN;Acc:ZDB-GENE-030131-6202]
73. zgc:161969 ENSDARG00000041359 898 0.994 - - - - - - 0.994 - - zgc:161969 [Source:ZFIN;Acc:ZDB-GENE-030131-2597]
74. fbxo30a ENSDARG00000058561 867 0.994 - - - - - - 0.994 - - F-box protein 30a [Source:ZFIN;Acc:ZDB-GENE-040426-1215]
75. acn9 acn9 520 0.994 - - - - - - 0.994 - -
76. zgc:162612 ENSDARG00000079699 244 0.994 - - - - - - 0.994 - - zgc:162612 [Source:ZFIN;Acc:ZDB-GENE-070410-88]
77. dlx4b ENSDARG00000071560 446 0.993 - - - - - - 0.993 - - distal-less homeobox 4b [Source:ZFIN;Acc:ZDB-GENE-990415-50]
78. gnsb ENSDARG00000098296 1075 0.993 - - - - - - 0.993 - - glucosamine (N-acetyl)-6-sulfatase (Sanfilippo disease IIID), b [Source:ZFIN;Acc:ZDB-GENE-030131-5846]
79. zgc:66014 817 0.993 - - - - - - 0.993 - - zgc:66014, transcript variant X6
80. COL13A1 1565 0.993 - - - - - - 0.993 - - collagen, type XIII, alpha 1, transcript variant X1
81. CU638740.1 CU638740.1 398 0.993 - - - - - - 0.993 - -
82. btf3l4_1 ENSDARG00000089681 1089 0.993 - - - - - - 0.993 - - basic transcription factor 3-like 4 [Source:ZFIN;Acc:ZDB-GENE-040426-1650]
83. smurf1 ENSDARG00000016086 878 0.993 - - - - - - 0.993 - - SMAD specific E3 ubiquitin protein ligase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2744]
84. CAPN5 CAPN5 357 0.993 - - - - - - 0.993 - -
85. papolg ENSDARG00000012141 1445 0.993 - - - - - - 0.993 - - poly(A) polymerase gamma [Source:ZFIN;Acc:ZDB-GENE-040426-1256]
86. smc5 ENSDARG00000044282 779 0.993 - - - - - - 0.993 - - structural maintenance of chromosomes 5 [Source:ZFIN;Acc:ZDB-GENE-061013-288]
87. esyt3 ENSDARG00000006422 335 0.993 - - - - - - 0.993 - - extended synaptotagmin-like protein 3 [Source:ZFIN;Acc:ZDB-GENE-050809-35]
88. nhp2l1a nhp2l1a 993 0.993 - - - - - - 0.993 - -
89. gli1 ENSDARG00000101244 534 0.992 - - - - - - 0.992 - - GLI family zinc finger 1 [Source:ZFIN;Acc:ZDB-GENE-030321-1]
90. grk5 ENSDARG00000032801 490 0.992 - - - - - - 0.992 - - G protein-coupled receptor kinase 5 [Source:ZFIN;Acc:ZDB-GENE-091204-274]
91. nelfa ENSDARG00000061411, ENSDARG00000116904 581 0.992 - - - - - - 0.992 - - negative elongation factor complex member A [Source:ZFIN;Acc:ZDB-GENE-030131-6400]
92. zgc:162816 ENSDARG00000070416 974 0.992 - - - - - - 0.992 - - zgc:162816 [Source:ZFIN;Acc:ZDB-GENE-070410-94]
93. SPEN ENSDARG00000074245, ENSDARG00000116696 1412 0.992 - - - - - - 0.992 - - spen family transcriptional repressor [Source:ZFIN;Acc:ZDB-GENE-050309-70]
94. cux1b ENSDARG00000043134 641 0.992 - - - - - - 0.992 - - cut-like homeobox 1b [Source:ZFIN;Acc:ZDB-GENE-040801-260]
95. mrpl24 ENSDARG00000019222 798 0.992 - - - - - - 0.992 - - mitochondrial ribosomal protein L24 [Source:ZFIN;Acc:ZDB-GENE-040718-98]
96. tmem181 ENSDARG00000045910 2288 0.992 - - - - - - 0.992 - - transmembrane protein 181 [Source:ZFIN;Acc:ZDB-GENE-060503-309]
97. mmab ENSDARG00000068344 526 0.992 - - - - - - 0.992 - - methylmalonic aciduria (cobalamin deficiency) cblB type [Source:ZFIN;Acc:ZDB-GENE-060526-232]
98. si:ch211-241o7.5 si:ch211-241o7.5 1387 0.992 - - - - - - 0.992 - -
99. mrps7 ENSDARG00000101622 889 0.992 - - - - - - 0.992 - - mitochondrial ribosomal protein S7 [Source:ZFIN;Acc:ZDB-GENE-050809-112]
100. asb12a ENSDARG00000017086, ENSDARG00000110715 4230 0.992 - - - - - - 0.992 - - ankyrin repeat and SOCS box-containing 12a [Source:ZFIN;Acc:ZDB-GENE-030131-1647]

There are 634 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA