Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tmco1

Gene Name Gene ID Reads Annotation
tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]










Genes with expression patterns similar to tmco1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmco1 ENSDARG00000069099, ENSDARG00000113013 4698 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane and coiled-coil domains 1 [Source:ZFIN;Acc:ZDB-GENE-050417-344]
2. ncl ENSDARG00000002710 16951 2.483 - 0.740 - - - 0.746 0.997 - - nucleolin [Source:ZFIN;Acc:ZDB-GENE-030131-6986]
3. sucla2 ENSDARG00000005359 5992 2.221 - 0.729 - - 0.789 0.703 - - - succinate-CoA ligase, ADP-forming, beta subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1963]
4. fam13a ENSDARG00000075564 1905 2.198 - 0.702 - - 0.774 0.722 - - - family with sequence similarity 13, member A [Source:ZFIN;Acc:ZDB-GENE-050208-102]
5. TSG101 TSG101 1686 1.818 - - - - 0.818 - 1.000 - -
6. rtf1 ENSDARG00000008947 6596 1.785 - - - - 0.786 - 0.999 - - RTF1 homolog, Paf1/RNA polymerase II complex component [Source:ZFIN;Acc:ZDB-GENE-030131-6778]
7. SNORD72 SNORD72 4018 1.769 - - - - 0.778 - 0.991 - -
8. ttll4 ENSDARG00000078935 1663 1.755 - - - - 0.755 - 1.000 - - tubulin tyrosine ligase-like family, member 4 [Source:ZFIN;Acc:ZDB-GENE-070912-313]
9. atp5h 18018 1.748 - - - - - 0.759 0.989 - - ATP synthase, H+ transporting, mitochondrial Fo complex, subunit d, transcript variant X1
10. dct ENSDARG00000006008 2466 1.736 - - - - 0.737 - 0.999 - - dopachrome tautomerase [Source:ZFIN;Acc:ZDB-GENE-000508-1]
11. lepre1 lepre1 5346 1.703 - 0.704 - - - - 0.999 - -
12. pfdn5 ENSDARG00000035043, ENSDARG00000109218, ENSDARG00000110370, ENSDARG00000113603 7566 1.666 - 0.865 - - - 0.801 - - - prefoldin 5 [Source:ZFIN;Acc:ZDB-GENE-030131-6858]
13. ndufb7 ENSDARG00000033789 5898 1.648 - 0.876 - 0.772 - - - - - NADH:ubiquinone oxidoreductase subunit B7 [Source:ZFIN;Acc:ZDB-GENE-040426-1886]
14. uqcrfs1_1 ENSDARG00000007745 2687 1.572 - - - - 0.815 0.757 - - - ubiquinol-cytochrome c reductase, Rieske iron-sulfur polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2060]
15. hist2h2l ENSDARG00000068996, ENSDARG00000112150 10411 1.569 - 0.835 - - - 0.734 - - - histone 2, H2, like [Source:ZFIN;Acc:ZDB-GENE-031118-36]
16. eif2s2 ENSDARG00000053047 15904 1.549 - - - - - 0.831 - - 0.718 eukaryotic translation initiation factor 2, subunit 2 beta [Source:ZFIN;Acc:ZDB-GENE-030131-3085]
17. cops8 ENSDARG00000024846, ENSDARG00000115974 3053 1.529 - 0.742 - - 0.787 - - - - COP9 signalosome subunit 8 [Source:ZFIN;Acc:ZDB-GENE-040426-982]
18. PHLPP1 ENSDARG00000078694 2466 1.525 - - - - 0.750 0.775 - - - PH domain and leucine rich repeat protein phosphatase 1 [Source:ZFIN;Acc:ZDB-GENE-131127-271]
19. tspan9b ENSDARG00000045706, ENSDARG00000110620, ENSDARG00000111048 2161 1.523 - 0.821 - - 0.702 - - - - tetraspanin 9b [Source:ZFIN;Acc:ZDB-GENE-040704-25]
20. cct8 ENSDARG00000008243 6843 1.522 - 0.723 - - - 0.799 - - - chaperonin containing TCP1, subunit 8 (theta) [Source:ZFIN;Acc:ZDB-GENE-040426-876]
21. CABZ01087568.1 CABZ01087568.1 1487 1.512 - - - - 0.773 0.739 - - -
22. knop1 ENSDARG00000077721 2198 1.51 - 0.775 - - 0.735 - - - - lysine-rich nucleolar protein 1 [Source:ZFIN;Acc:ZDB-GENE-090313-76]
23. ppp4cb ENSDARG00000076439 1693 1.504 - 0.728 - - 0.776 - - - - protein phosphatase 4, catalytic subunit b [Source:ZFIN;Acc:ZDB-GENE-080219-32]
24. pomp ENSDARG00000032296 4439 1.502 - 0.747 - - - 0.755 - - - proteasome maturation protein [Source:ZFIN;Acc:ZDB-GENE-040801-10]
25. paip2b ENSDARG00000008706 4255 1.501 - 0.790 - - - 0.711 - - - poly(A) binding protein interacting protein 2B [Source:ZFIN;Acc:ZDB-GENE-040426-1736]
26. ccdc47 ENSDARG00000054362 5970 1.495 - 0.785 - - - - - - 0.710 coiled-coil domain containing 47 [Source:ZFIN;Acc:ZDB-GENE-040912-15]
27. mrps21 ENSDARG00000070985 3943 1.486 - 0.742 - - - 0.744 - - - mitochondrial ribosomal protein S21 [Source:ZFIN;Acc:ZDB-GENE-070615-13]
28. sra1 ENSDARG00000053619 2799 1.485 - 0.776 - - 0.709 - - - - steroid receptor RNA activator 1 [Source:ZFIN;Acc:ZDB-GENE-040625-6]
29. fryl ENSDARG00000040001 3256 1.484 - 0.760 - - 0.724 - - - - furry homolog, like [Source:ZFIN;Acc:ZDB-GENE-040914-58]
30. dock7 ENSDARG00000078675 1995 1.478 - - - - 0.770 0.708 - - - dedicator of cytokinesis 7 [Source:ZFIN;Acc:ZDB-GENE-050302-15]
31. slc20a2 ENSDARG00000060796, ENSDARG00000113613 5420 1.465 - 0.763 - - - 0.702 - - - solute carrier family 20 (phosphate transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-060929-828]
32. hars ENSDARG00000003693 7217 1.462 - - - - - 0.733 - - 0.729 histidyl-tRNA synthetase [Source:ZFIN;Acc:ZDB-GENE-040912-152]
33. pak2b ENSDARG00000018476 4331 1.456 - 0.717 - - 0.739 - - - - p21 protein (Cdc42/Rac)-activated kinase 2b [Source:ZFIN;Acc:ZDB-GENE-030131-3759]
34. idi1 ENSDARG00000019976 1288 1.438 - 0.717 - - - 0.721 - - - isopentenyl-diphosphate delta isomerase 1 [Source:ZFIN;Acc:ZDB-GENE-050913-44]
35. psmb2 ENSDARG00000031511 4016 1.435 - 0.700 - - - 0.735 - - - proteasome subunit beta 2 [Source:ZFIN;Acc:ZDB-GENE-040718-353]
36. synpo2lb ENSDARG00000078696 2361 1.424 - 0.704 - - - 0.720 - - - synaptopodin 2-like b [Source:ZFIN;Acc:ZDB-GENE-090828-5]
37. pfdn6 ENSDARG00000037108 2083 1.414 - 0.705 - - 0.709 - - - - prefoldin subunit 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1589]
38. pno1 ENSDARG00000008502 4547 1.41 - - - - - 0.705 - - 0.705 partner of NOB1 homolog [Source:ZFIN;Acc:ZDB-GENE-040426-1419]
39. gcn1l1 gcn1l1 6031 1 - - - - - - 1.000 - -
40. slc4a2b ENSDARG00000052330 1900 1 - - - - - - 1.000 - - solute carrier family 4 (anion exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-030429-14]
41. rfxap ENSDARG00000076891 1299 1 - - - - - - 1.000 - - regulatory factor X-associated protein [Source:ZFIN;Acc:ZDB-GENE-091204-321]
42. plagl2 ENSDARG00000076657 2057 1 - - - - - - 1.000 - - pleiomorphic adenoma gene-like 2 [Source:ZFIN;Acc:ZDB-GENE-020806-1]
43. FAT1 FAT1 689 1 - - - - - - 1.000 - -
44. pinx1 ENSDARG00000023532 4452 1 - - - - - - 1.000 - - PIN2 (TERF1) interacting telomerase inhibitor 1 [Source:ZFIN;Acc:ZDB-GENE-030515-2]
45. fam160a1 fam160a1 1445 1 - - - - - - 1.000 - -
46. zgc:55558 ENSDARG00000013161, ENSDARG00000111354 1687 1 - - - - - - 1.000 - - zgc:55558 [Source:ZFIN;Acc:ZDB-GENE-040426-740]
47. CR847934.1 CR847934.1 2658 1 - - - - - - 1.000 - -
48. rnd3a ENSDARG00000076799 4705 1 - - - - - - 1.000 - - Rho family GTPase 3a [Source:ZFIN;Acc:ZDB-GENE-010319-40]
49. rif1 ENSDARG00000062650, ENSDARG00000110568 1751 1 - - - - - - 1.000 - - replication timing regulatory factor 1 [Source:ZFIN;Acc:ZDB-GENE-030131-3406]
50. hoxc10a ENSDARG00000070348 2323 1 - - - - - - 1.000 - - homeobox C10a [Source:ZFIN;Acc:ZDB-GENE-990415-110]
51. NDUFB2 ENSDARG00000045490 9141 1 - - - - - - 1.000 - - NADH:ubiquinone oxidoreductase subunit B2 [Source:ZFIN;Acc:ZDB-GENE-040426-1762]
52. pcif1 ENSDARG00000099084 2851 1 - - - - - - 1.000 - - PDX1 C-terminal inhibiting factor 1 [Source:ZFIN;Acc:ZDB-GENE-120920-2]
53. LMLN ENSDARG00000061265 1618 1 - - - - - - 1.000 - - leishmanolysin-like (metallopeptidase M8 family) [Source:ZFIN;Acc:ZDB-GENE-081104-298]
54. cenpf ENSDARG00000055133 5267 1 - - - - - - 1.000 - - centromere protein F [Source:ZFIN;Acc:ZDB-GENE-041111-205]
55. CCNA2 ENSDARG00000011094 3996 1 - - - - - - 1.000 - - cyclin A2 [Source:ZFIN;Acc:ZDB-GENE-020418-1]
56. thumpd3 ENSDARG00000059634, ENSDARG00000113066 7065 1 - - - - - - 1.000 - - THUMP domain containing 3 [Source:ZFIN;Acc:ZDB-GENE-030131-9745]
57. cx44.1 cx44.1 799 1 - - - - - - 1.000 - -
58. oafa ENSDARG00000075851 2015 1 - - - - - - 1.000 - - OAF homolog a (Drosophila) [Source:ZFIN;Acc:ZDB-GENE-090917-1]
59. PREX2 ENSDARG00000071692 827 1 - - - - - - 1.000 - - phosphatidylinositol-3,4,5-trisphosphate-dependent Rac exchange factor 2 [Source:ZFIN;Acc:ZDB-GENE-091113-37]
60. slc7a4 ENSDARG00000068286 1693 1 - - - - - - 1.000 - - solute carrier family 7, member 4 [Source:ZFIN;Acc:ZDB-GENE-030919-2]
61. alcamb ENSDARG00000058538 5672 0.999 - - - - - - 0.999 - - activated leukocyte cell adhesion molecule b [Source:ZFIN;Acc:ZDB-GENE-030131-1768]
62. CR388095.3 CR388095.3 2548 0.999 - - - - - - 0.999 - -
63. SNORD33 SNORD33 3284 0.999 - - - - - - 0.999 - -
64. ryr1a ENSDARG00000011422 2377 0.999 - - - - - - 0.999 - - ryanodine receptor 1a (skeletal) [Source:ZFIN;Acc:ZDB-GENE-020108-2]
65. wwp2 ENSDARG00000061345 3459 0.999 - - - - - - 0.999 - - WW domain containing E3 ubiquitin protein ligase 2 [Source:ZFIN;Acc:ZDB-GENE-000607-82]
66. pdlim5b ENSDARG00000027600 4252 0.999 - - - - - - 0.999 - - PDZ and LIM domain 5b [Source:ZFIN;Acc:ZDB-GENE-040426-908]
67. hbbe2 ENSDARG00000045143, ENSDARG00000109554 5244 0.999 - - - - - - 0.999 - - hemoglobin beta embryonic-2 [Source:ZFIN;Acc:ZDB-GENE-040702-1]
68. lhfpl2b_1 ENSDARG00000098153 1596 0.999 - - - - - - 0.999 - - LHFPL tetraspan subfamily member 2b [Source:ZFIN;Acc:ZDB-GENE-050417-10]
69. si:dkey-184p9.7 ENSDARG00000092726 2679 0.999 - - - - - - 0.999 - - si:dkey-184p9.7 [Source:ZFIN;Acc:ZDB-GENE-091204-97]
70. atp6ap1b ENSDARG00000037153 3970 0.998 - - - - - - 0.998 - - ATPase H+ transporting accessory protein 1b [Source:ZFIN;Acc:ZDB-GENE-020423-2]
71. si:ch211-51e12.7 ENSDARG00000045914 9598 0.998 - - - - - - 0.998 - - si:ch211-51e12.7 [Source:ZFIN;Acc:ZDB-GENE-030131-8279]
72. ABHD12B ABHD12B 1877 0.998 - - - - - - 0.998 - -
73. si:ch211-32p8.1 si:ch211-32p8.1 3402 0.998 - - - - - - 0.998 - -
74. aldh7a1 ENSDARG00000018426 4637 0.998 - - - - - - 0.998 - - aldehyde dehydrogenase 7 family, member A1 [Source:ZFIN;Acc:ZDB-GENE-030131-6129]
75. vcl vcl 6667 0.997 - - - - - - 0.997 - -
76. lfng ENSDARG00000037879 11783 0.997 - - - - - - 0.997 - - LFNG O-fucosylpeptide 3-beta-N-acetylglucosaminyltransferase [Source:ZFIN;Acc:ZDB-GENE-980605-16]
77. ptprfb ENSDARG00000005754 7178 0.997 - - - - - - 0.997 - - protein tyrosine phosphatase, receptor type, f, b [Source:ZFIN;Acc:ZDB-GENE-060503-530]
78. jagn1b ENSDARG00000014995 2063 0.996 - - - - - - 0.996 - - jagunal homolog 1b [Source:ZFIN;Acc:ZDB-GENE-040801-103]
79. purbb ENSDARG00000103546 4983 0.996 - - - - - - 0.996 - - purine-rich element binding protein Bb [Source:ZFIN;Acc:ZDB-GENE-040426-1478]
80. ist1 ENSDARG00000051888 4536 0.995 - - - - - - 0.995 - - increased sodium tolerance 1 homolog (yeast) [Source:ZFIN;Acc:ZDB-GENE-030131-179]
81. ostc ENSDARG00000104901 16240 0.993 - - - - - - 0.993 - - oligosaccharyltransferase complex subunit [Source:ZFIN;Acc:ZDB-GENE-040426-1079]
82. si:ch211-160e1.5 5586 0.991 - - - - - - 0.991 - - si:ch211-160e1.5
83. sgms1 ENSDARG00000029621 6376 0.99 - - - - - - 0.990 - - sphingomyelin synthase 1 [Source:ZFIN;Acc:ZDB-GENE-061103-295]
84. myh10 ENSDARG00000000103 7522 0.987 - - - - - - 0.987 - - myosin, heavy chain 10, non-muscle [Source:ZFIN;Acc:ZDB-GENE-030616-162]
85. eif5a2 ENSDARG00000056186 43804 0.968 - - - - - - 0.968 - - eukaryotic translation initiation factor 5A2 [Source:ZFIN;Acc:ZDB-GENE-040426-2405]
86. marcksl1a ENSDARG00000039034 37303 0.962 - - - - - - 0.962 - - MARCKS-like 1a [Source:ZFIN;Acc:ZDB-GENE-040426-2146]
87. ccni ENSDARG00000068214 17558 0.946 - - - - - - 0.946 - - cyclin I [Source:ZFIN;Acc:ZDB-GENE-040426-2898]
88. hbbe1.1 ENSDARG00000113599 64815 0.94 - - - - - - 0.940 - - hemoglobin beta embryonic-1.1 [Source:ZFIN;Acc:ZDB-GENE-030616-7]
89. tmod4 ENSDARG00000020890 17436 0.94 - - - - - - 0.940 - - tropomodulin 4 (muscle) [Source:ZFIN;Acc:ZDB-GENE-991019-9]
90. atp5c1 31368 0.921 - - - - - - 0.921 - - ATP synthase, H+ transporting, mitochondrial F1 complex, gamma polypeptide 1, transcript variant 3
91. CU914813.1 CU914813.1 29656 0.919 - - - - - - 0.919 - -
92. capns1a ENSDARG00000035329 10870 0.905 - - - - - - 0.905 - - calpain, small subunit 1 a [Source:ZFIN;Acc:ZDB-GENE-030113-3]
93. rps16 ENSDARG00000045487 43243 0.894 - - - - - - 0.894 - - ribosomal protein S16 [Source:ZFIN;Acc:ZDB-GENE-050506-107]
94. hk1 ENSDARG00000039452, ENSDARG00000110447, ENSDARG00000112051 5026 0.892 - 0.892 - - - - - - - hexokinase 1 [Source:ZFIN;Acc:ZDB-GENE-040426-2848]
95. ubc ENSDARG00000102632 36050 0.891 - - - - - - 0.891 - - ubiquitin C [Source:ZFIN;Acc:ZDB-GENE-061110-88]
96. desma ENSDARG00000058656 30292 0.885 - - - - - - 0.885 - - desmin a [Source:ZFIN;Acc:ZDB-GENE-980526-221]
97. prkar2aa ENSDARG00000033184 14704 0.881 - - - - - - 0.881 - - protein kinase, cAMP-dependent, regulatory, type II, alpha A [Source:ZFIN;Acc:ZDB-GENE-030131-1007]
98. SERP1_1 ENSDARG00000076223 6668 0.875 - 0.875 - - - - - - - stress associated endoplasmic reticulum protein 1 [Source:HGNC Symbol;Acc:HGNC:10759]
99. tpm2 ENSDARG00000104682 36853 0.87 - - - - - - 0.870 - - tropomyosin 2 (beta) [Source:ZFIN;Acc:ZDB-GENE-040625-114]
100. tpm3 ENSDARG00000005162 86049 0.866 - - - - - - 0.866 - - tropomyosin 3 [Source:ZFIN;Acc:ZDB-GENE-030826-16]

There are 752 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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