Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmcc2

Gene Name Gene ID Reads Annotation
tmcc2 ENSDARG00000046007 148 transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]










Genes with expression patterns similar to tmcc2

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmcc2 ENSDARG00000046007 148 9 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 1.000 transmembrane and coiled-coil domain family 2 [Source:ZFIN;Acc:ZDB-GENE-091202-2]
2. pax6a ENSDARG00000103379 3061 2.484 - 0.835 - - - - 0.865 0.784 - paired box 6a [Source:ZFIN;Acc:ZDB-GENE-990415-200]
3. si:dkey-193c22.1 ENSDARG00000093687 104 2.434 0.817 - - - - 0.771 0.846 - - si:dkey-193c22.1 [Source:ZFIN;Acc:ZDB-GENE-030131-7957]
4. nat8l ENSDARG00000077256, ENSDARG00000115322 3513 2.413 - - - - - 0.765 0.838 0.810 - N-acetyltransferase 8-like [Source:ZFIN;Acc:ZDB-GENE-030729-4]
5. PRKAR2B ENSDARG00000036446 812 2.376 - - - - - 0.785 0.879 0.712 - protein kinase cAMP-dependent type II regulatory subunit beta [Source:HGNC Symbol;Acc:HGNC:9392]
6. slc1a2b ENSDARG00000102453 3136 2.326 0.734 0.746 - - - - 0.846 - - solute carrier family 1 (glial high affinity glutamate transporter), member 2b [Source:ZFIN;Acc:ZDB-GENE-030131-7779]
7. syngr3a ENSDARG00000014871 405 2.321 - 0.769 - - - 0.799 0.753 - - synaptogyrin 3a [Source:ZFIN;Acc:ZDB-GENE-050522-541]
8. nacad ENSDARG00000012347 1268 2.313 0.773 - - - - 0.838 0.702 - - NAC alpha domain containing [Source:ZFIN;Acc:ZDB-GENE-091020-7]
9. zgc:195245 ENSDARG00000078917, ENSDARG00000115812 49 2.301 0.786 - - - - 0.721 0.794 - - zgc:195245 [Source:ZFIN;Acc:ZDB-GENE-081022-200]
10. dtnbp1b ENSDARG00000055206 64 2.298 - 0.707 - - - 0.792 0.799 - - dystrobrevin binding protein 1b [Source:ZFIN;Acc:ZDB-GENE-060503-889]
11. dbx2 2971 2.296 - 0.723 - - - 0.801 0.772 - - developing brain homeobox 2
12. dpysl4 ENSDARG00000103490 534 2.282 0.807 - - - - - 0.758 0.717 - dihydropyrimidinase-like 4 [Source:ZFIN;Acc:ZDB-GENE-050720-3]
13. gabrg2 ENSDARG00000053665 434 2.279 0.810 - - - - - 0.713 0.756 - gamma-aminobutyric acid (GABA) A receptor, gamma 2 [Source:ZFIN;Acc:ZDB-GENE-091118-65]
14. gpr173 ENSDARG00000042922 238 2.279 0.731 - - - - 0.702 0.846 - - G protein-coupled receptor 173 [Source:ZFIN;Acc:ZDB-GENE-000710-1]
15. map7d2a ENSDARG00000068480 513 2.265 0.777 - - - - 0.774 0.714 - - MAP7 domain containing 2a [Source:ZFIN;Acc:ZDB-GENE-060526-150]
16. si:dkey-17e6.2 si:dkey-17e6.2 72 2.215 0.789 - - - - 0.700 0.726 - -
17. kcnd1 ENSDARG00000074746 153 1.791 - - - - - 0.874 0.917 - - potassium voltage-gated channel, Shal-related subfamily, member 1 [Source:ZFIN;Acc:ZDB-GENE-081105-40]
18. lphn3.1 lphn3.1 756 1.746 - - - - - - 0.896 0.850 -
19. si:dkey-202n8.1 si:dkey-202n8.1 35 1.737 - - 0.886 - - - 0.851 - -
20. zgc:194665 ENSDARG00000004577 136 1.714 0.843 - - - - 0.871 - - - zgc:194665 [Source:ZFIN;Acc:ZDB-GENE-080722-38]
21. FGFBP3 FGFBP3 993 1.684 - - - - - 0.818 0.866 - -
22. C21H5orf24 C21H5orf24 333 1.681 0.824 - - - - - 0.857 - -
23. bai3 bai3 92 1.677 - - - - - 0.755 0.922 - -
24. fbxl3b ENSDARG00000021882 58 1.675 0.829 - - - - - 0.846 - - F-box and leucine-rich repeat protein 3b [Source:ZFIN;Acc:ZDB-GENE-041010-178]
25. pdzd4 175 1.674 - - - - - 0.834 0.840 - - PDZ domain containing 4, transcript variant X2
26. CR524483.1 ENSDARG00000109248 86 1.674 0.789 - - - - - 0.885 - - si:dkey-151p21.7 [Source:NCBI gene;Acc:562936]
27. neto1l ENSDARG00000071596 57 1.672 - - 0.750 - - - 0.922 - - neuropilin (NRP) and tolloid (TLL)-like 1, like [Source:ZFIN;Acc:ZDB-GENE-091207-1]
28. chrna3 ENSDARG00000100991, ENSDARG00000116434 63 1.669 - - - - - 0.727 0.942 - - cholinergic receptor, nicotinic, alpha 3 [Source:ZFIN;Acc:ZDB-GENE-070822-1]
29. lrp11 ENSDARG00000034076 313 1.664 - - - - - - 0.872 0.792 - low density lipoprotein receptor-related protein 11 [Source:ZFIN;Acc:ZDB-GENE-030131-7847]
30. zic6 ENSDARG00000071496 402 1.661 0.817 - - - - 0.844 - - - zic family member 6 [Source:ZFIN;Acc:ZDB-GENE-061207-1]
31. necab2 ENSDARG00000056745, ENSDARG00000110976 304 1.66 - - - - - 0.772 0.888 - - N-terminal EF-hand calcium binding protein 2 [Source:ZFIN;Acc:ZDB-GENE-050706-167]
32. dync1i1 ENSDARG00000060948 554 1.657 0.886 - - - - 0.771 - - - dynein, cytoplasmic 1, intermediate chain 1 [Source:ZFIN;Acc:ZDB-GENE-061215-62]
33. spock2 ENSDARG00000075393 791 1.649 0.859 - - - - - 0.790 - - SPARC (osteonectin), cwcv and kazal like domains proteoglycan 2 [Source:ZFIN;Acc:ZDB-GENE-090312-170]
34. sypb ENSDARG00000002230 262 1.646 - - - - - 0.806 0.840 - - synaptophysin b [Source:ZFIN;Acc:ZDB-GENE-040718-205]
35. rnf165a ENSDARG00000077906 133 1.645 - 0.707 - - - - 0.938 - - ring finger protein 165a [Source:ZFIN;Acc:ZDB-GENE-091118-64]
36. COX5B ENSDARG00000015978 70 1.64 0.789 - - - - - 0.851 - - cytochrome c oxidase subunit 5B [Source:HGNC Symbol;Acc:HGNC:2269]
37. fez1 ENSDARG00000023174 701 1.639 - - - - - - 0.927 0.712 - fasciculation and elongation protein zeta 1 (zygin I) [Source:ZFIN;Acc:ZDB-GENE-040426-2723]
38. SHANK1 ENSDARG00000060539 102 1.639 - - - - - 0.826 0.813 - - SH3 and multiple ankyrin repeat domains 1 [Source:ZFIN;Acc:ZDB-GENE-130530-691]
39. pax3a ENSDARG00000010192 626 1.637 - 0.811 - - - - 0.826 - - paired box 3a [Source:ZFIN;Acc:ZDB-GENE-980526-52]
40. si:dkey-266f7.10 ENSDARG00000086613 7 1.635 0.789 - - - - - 0.846 - - si:dkey-266f7.10 [Source:ZFIN;Acc:ZDB-GENE-120215-242]
41. xkr8.1 ENSDARG00000004498 18 1.635 0.789 - - - - - 0.846 - - XK, Kell blood group complex subunit-related family, member 8, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-110106-1]
42. CABZ01084273.1 CABZ01084273.1 16 1.635 0.789 - - - - - 0.846 - -
43. fgf13b ENSDARG00000056633 455 1.634 - - - - - 0.765 0.869 - - fibroblast growth factor 13b [Source:ZFIN;Acc:ZDB-GENE-040426-1793]
44. GPR153 ENSDARG00000087601 48 1.632 0.786 - - - - - 0.846 - - G protein-coupled receptor 153 [Source:ZFIN;Acc:ZDB-GENE-050823-7]
45. syngr3b ENSDARG00000025034 290 1.631 0.896 - - - - 0.735 - - - synaptogyrin 3b [Source:ZFIN;Acc:ZDB-GENE-070822-6]
46. CRIP2 ENSDARG00000070670 323 1.629 0.871 - - - - 0.758 - - - cysteine-rich protein 2 [Source:ZFIN;Acc:ZDB-GENE-040426-2889]
47. BX470131.1 BX470131.1 86 1.625 0.789 - - - - - 0.836 - -
48. rusc1 ENSDARG00000078125 617 1.625 - - - - - 0.810 0.815 - - RUN and SH3 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-100922-274]
49. SMARCA4 ENSDARG00000104339 48 1.625 - - - - - 0.779 0.846 - - SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4 [Source:HGNC Symbol;Acc:HGNC:11100]
50. NPBWR2 NPBWR2 132 1.624 0.789 - - - - 0.835 - - -
51. evx2 ENSDARG00000059255 317 1.62 - - - - - 0.788 0.832 - - even-skipped homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-980526-215]
52. SAMD14 145 1.618 - - - - - 0.789 0.829 - - sterile alpha motif domain containing 14, transcript variant X3
53. skor1b ENSDARG00000062448, ENSDARG00000112341 282 1.616 - - - - - 0.778 0.838 - - SKI family transcriptional corepressor 1b [Source:ZFIN;Acc:ZDB-GENE-050419-82]
54. scn8aa ENSDARG00000005775 792 1.614 - - - - - 0.714 0.900 - - sodium channel, voltage gated, type VIII, alpha subunit a [Source:ZFIN;Acc:ZDB-GENE-000828-1]
55. RHOBTB1 ENSDARG00000079468 189 1.614 - - - - - - 0.846 0.768 - Rho related BTB domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-130530-871]
56. nbeaa ENSDARG00000070080 862 1.614 - - - - - 0.789 0.825 - - neurobeachin a [Source:ZFIN;Acc:ZDB-GENE-050320-68]
57. SPTBN4_1 ENSDARG00000092624 473 1.609 - - - - - 0.751 0.858 - - spectrin beta, non-erythrocytic 4 [Source:HGNC Symbol;Acc:HGNC:14896]
58. ttll7 ENSDARG00000062973 519 1.608 0.819 - - - - - 0.789 - - tubulin tyrosine ligase-like family, member 7 [Source:ZFIN;Acc:ZDB-GENE-070112-2112]
59. syt11b ENSDARG00000056105 578 1.607 - - - - - 0.831 - 0.776 - synaptotagmin XIb [Source:ZFIN;Acc:ZDB-GENE-090601-7]
60. adgra1a ENSDARG00000054177 19 1.607 0.761 - - - - - 0.846 - - adhesion G protein-coupled receptor A1a [Source:ZFIN;Acc:ZDB-GENE-130603-101]
61. nova1 ENSDARG00000020178 4129 1.605 - 0.743 - - - - 0.862 - - neuro-oncological ventral antigen 1 [Source:ZFIN;Acc:ZDB-GENE-060526-113]
62. clstn3 ENSDARG00000073883 590 1.604 - - - - - 0.736 0.868 - - calsyntenin 3 [Source:ZFIN;Acc:ZDB-GENE-100921-73]
63. si:dkeyp-69c1.7 ENSDARG00000087165 31 1.603 - - - - - 0.757 0.846 - - si:dkeyp-69c1.7 [Source:ZFIN;Acc:ZDB-GENE-091204-69]
64. BAALC 250 1.601 - - - - - 0.874 0.727 - - brain and acute leukemia, cytoplasmic
65. ndrg4 ENSDARG00000103937 1234 1.599 0.799 - - - - - 0.800 - - NDRG family member 4 [Source:ZFIN;Acc:ZDB-GENE-060512-226]
66. SV2A ENSDARG00000059945 1278 1.597 0.775 - - - - - 0.822 - - synaptic vesicle glycoprotein 2A [Source:ZFIN;Acc:ZDB-GENE-131001-1]
67. rab3aa ENSDARG00000056347, ENSDARG00000114357 160 1.591 - - - - - 0.806 0.785 - - RAB3A, member RAS oncogene family, a [Source:ZFIN;Acc:ZDB-GENE-040801-2]
68. nrg2b ENSDARG00000086585 100 1.589 0.743 - - - - - 0.846 - - neuregulin 2b [Source:ZFIN;Acc:ZDB-GENE-090205-2]
69. gsx1 ENSDARG00000035735 1243 1.585 - - - - - 0.767 0.818 - - GS homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-041008-135]
70. slc8a2b ENSDARG00000100592 598 1.584 - - - - - 0.788 0.796 - - solute carrier family 8 (sodium/calcium exchanger), member 2b [Source:ZFIN;Acc:ZDB-GENE-050419-209]
71. rbfox3 rbfox3 1443 1.583 - - - - - 0.733 0.850 - -
72. dbx1a ENSDARG00000086393 3161 1.583 - 0.760 - - - - 0.823 - - developing brain homeobox 1a [Source:ZFIN;Acc:ZDB-GENE-000128-8]
73. KCNA1 KCNA1 268 1.582 - 0.816 - - - 0.766 - - -
74. syt4 ENSDARG00000036505 421 1.581 - - - - - 0.741 0.840 - - synaptotagmin IV [Source:ZFIN;Acc:ZDB-GENE-030131-7297]
75. grin1a ENSDARG00000027828 1327 1.579 - - - - - 0.740 0.839 - - glutamate receptor, ionotropic, N-methyl D-aspartate 1a [Source:ZFIN;Acc:ZDB-GENE-051202-1]
76. hmga1b ENSDARG00000070951 377 1.577 - 0.811 - - - 0.766 - - - high mobility group AT-hook 1b [Source:ZFIN;Acc:ZDB-GENE-061013-204]
77. atp6v0a1b ENSDARG00000015174 1052 1.575 - - - - - 0.752 0.823 - - ATPase H+ transporting V0 subunit a1b [Source:ZFIN;Acc:ZDB-GENE-050522-215]
78. si:dkey-122c11.4 si:dkey-122c11.4 13 1.575 - - - - - - 0.846 0.729 -
79. adcyap1a ENSDARG00000004015 67 1.574 0.728 - - - - - 0.846 - - adenylate cyclase activating polypeptide 1a [Source:ZFIN;Acc:ZDB-GENE-020809-4]
80. si:ch211-63o20.10 13 1.572 - 0.726 - - - - 0.846 - - si:ch211-63o20.10
81. hnrnpa3 ENSDARG00000059351 453 1.572 - - - - - 0.749 0.823 - - heterogeneous nuclear ribonucleoprotein A3 [Source:ZFIN;Acc:ZDB-GENE-060224-1]
82. scn1bb ENSDARG00000105003 239 1.571 0.789 - - - - - 0.782 - - sodium channel, voltage-gated, type I, beta b [Source:ZFIN;Acc:ZDB-GENE-090408-1]
83. INA INA 950 1.571 - - - - - 0.703 0.868 - -
84. si:dkey-7b17.1 si:dkey-7b17.1 101 1.571 - 0.865 - - - - 0.706 - -
85. dnajc5aa ENSDARG00000042948 2885 1.567 - - - - - 0.797 0.770 - - DnaJ (Hsp40) homolog, subfamily C, member 5aa [Source:ZFIN;Acc:ZDB-GENE-031113-20]
86. olig3 ENSDARG00000074253 84 1.567 0.826 - - - - 0.741 - - - oligodendrocyte transcription factor 3 [Source:ZFIN;Acc:ZDB-GENE-080903-1]
87. mb21d2a mb21d2a 421 1.567 - - - - - 0.728 0.839 - -
88. AGO1 ENSDARG00000092644 4521 1.564 - - - - - 0.771 0.793 - - argonaute RISC catalytic component 1 [Source:ZFIN;Acc:ZDB-GENE-110606-3]
89. tmem178b ENSDARG00000006747 173 1.564 - - - - - 0.725 0.839 - - transmembrane protein 178B [Source:ZFIN;Acc:ZDB-GENE-040718-92]
90. prdm14 ENSDARG00000045371 106 1.563 - - - - - 0.717 0.846 - - PR domain containing 14 [Source:ZFIN;Acc:ZDB-GENE-030131-2709]
91. ntrk2a ENSDARG00000059897 185 1.563 - - - - - 0.727 0.836 - - neurotrophic tyrosine kinase, receptor, type 2a [Source:ZFIN;Acc:ZDB-GENE-010126-1]
92. her8a ENSDARG00000016363 996 1.562 0.800 - - - - - 0.762 - - hairy-related 8a [Source:ZFIN;Acc:ZDB-GENE-030131-2376]
93. penka ENSDARG00000004869 161 1.562 - - - - - 0.823 0.739 - - proenkephalin a [Source:ZFIN;Acc:ZDB-GENE-030729-31]
94. CBFA2T3 ENSDARG00000079012 6799 1.561 - - - - - 0.806 0.755 - - core-binding factor, runt domain, alpha subunit 2; translocated to, 3 [Source:ZFIN;Acc:ZDB-GENE-070209-2]
95. si:dkey-228i19.32 si:dkey-228i19.32 9 1.559 0.789 - - - - 0.770 - - -
96. shank2 ENSDARG00000062325 66 1.559 0.789 - - - - 0.770 - - - SH3 and multiple ankyrin repeat domains 2 [Source:ZFIN;Acc:ZDB-GENE-061207-58]
97. GJD2_1 GJD2_1 3045 1.559 - - - - - 0.701 0.858 - -
98. TRIM67 ENSDARG00000108787 290 1.556 - - - - - 0.804 0.752 - - tripartite motif containing 67 [Source:HGNC Symbol;Acc:HGNC:31859]
99. C8H9orf172 C8H9orf172 113 1.555 0.789 - - - - - 0.766 - -
100. cacna1g ENSDARG00000089913 19 1.554 - - - - - 0.708 0.846 - - calcium channel, voltage-dependent, T type, alpha 1G subunit [Source:ZFIN;Acc:ZDB-GENE-090514-2]

There are 1460 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA