Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tmc1

Gene Name Gene ID Reads Annotation
tmc1 23 transmembrane channel-like 1, transcript variant X1










Genes with expression patterns similar to tmc1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tmc1 23 8 1.000 1.000 1.000 1.000 1.000 1.000 - 1.000 1.000 transmembrane channel-like 1, transcript variant X1
2. cldng ENSDARG00000003701 84 2.289 - 0.802 0.771 - - 0.716 - - - claudin g [Source:ZFIN;Acc:ZDB-GENE-010328-7]
3. lsm14b ENSDARG00000025386 23 1.939 0.939 1.000 - - - - - - - LSM family member 14B [Source:ZFIN;Acc:ZDB-GENE-040426-779]
4. RP1L1 RP1L1 15 1.919 - 1.000 - - - 0.919 - - -
5. BX004980.1 ENSDARG00000099680 10 1.919 - 1.000 - - - 0.919 - - -
6. MRC2 ENSDARG00000078135, ENSDARG00000111490 10 1.871 - 1.000 - 0.871 - - - - - mannose receptor, C type 2 [Source:ZFIN;Acc:ZDB-GENE-090915-5]
7. si:ch211-229i14.2 ENSDARG00000086048 19 1.871 - 1.000 - 0.871 - - - - - si:ch211-229i14.2 [Source:ZFIN;Acc:ZDB-GENE-070705-123]
8. fermt3b ENSDARG00000030938 17 1.865 - - 0.934 - 0.931 - - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
9. si:dkey-20i20.12 si:dkey-20i20.12 7 1.842 0.842 1.000 - - - - - - -
10. si:dkey-222f2.3 si:dkey-222f2.3 8 1.842 0.842 - - - 1.000 - - - -
11. gpr183 gpr183 25 1.801 - - - - 0.858 - - - 0.943
12. hsd17b1 ENSDARG00000027469 11 1.761 0.842 - - - - 0.919 - - - hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
13. mxe ENSDARG00000014427 6 1.753 - 1.000 - - 0.753 - - - - myxovirus (influenza virus) resistance E [Source:ZFIN;Acc:ZDB-GENE-030131-9609]
14. ECM1 ECM1 87 1.752 - 0.815 0.937 - - - - - -
15. avpr1b avpr1b 58 1.731 0.842 - 0.889 - - - - - -
16. zgc:174654 zgc:174654 54 1.727 - 0.808 - - - 0.919 - - -
17. trmt2b ENSDARG00000033967 127 1.682 - 0.974 0.708 - - - - - - tRNA methyltransferase 2 homolog B [Source:ZFIN;Acc:ZDB-GENE-050809-101]
18. si:ch211-260b17.6 32 1.679 - - - - - 0.902 - - 0.777 si:ch211-260b17.6
19. si:dkey-30j22.3 si:dkey-30j22.3 17 1.667 0.842 - - - - 0.825 - - -
20. si:ch211-161h7.5 ENSDARG00000093044 12 1.659 - 0.788 - 0.871 - - - - - si:ch211-161h7.5 [Source:ZFIN;Acc:ZDB-GENE-091204-265]
21. tnfaip8l2a ENSDARG00000075592 90 1.65 - - 0.850 - - 0.800 - - - tumor necrosis factor, alpha-induced protein 8-like 2a [Source:ZFIN;Acc:ZDB-GENE-060616-38]
22. CR391986.2 CR391986.2 52 1.649 - 0.702 - - - 0.947 - - -
23. mbip ENSDARG00000019364 238 1.646 - - 0.794 - - 0.852 - - - MAP3K12 binding inhibitory protein 1 [Source:ZFIN;Acc:ZDB-GENE-060810-43]
24. CR854963.2 ENSDARG00000114235 82 1.638 0.819 - - - - 0.819 - - -
25. itga9 ENSDARG00000032435 35 1.63 - - - - - 0.844 - - 0.786 integrin, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-040426-1129]
26. lft1 ENSDARG00000019920 66 1.63 0.770 0.860 - - - - - - - lefty1 [Source:ZFIN;Acc:ZDB-GENE-990630-10]
27. sphkap ENSDARG00000017429 60 1.629 0.844 - - - - 0.785 - - - SPHK1 interactor, AKAP domain containing [Source:ZFIN;Acc:ZDB-GENE-050419-32]
28. fbxl18 ENSDARG00000007443, ENSDARG00000113264 178 1.623 - 0.737 - - - 0.886 - - - F-box and leucine-rich repeat protein 18 [Source:ZFIN;Acc:ZDB-GENE-050913-65]
29. ENDOD1_7 ENDOD1_7 33 1.613 0.842 0.771 - - - - - - -
30. si:dkey-261e22.5 si:dkey-261e22.5 68 1.61 0.718 0.892 - - - - - - -
31. SDR42E2 ENSDARG00000059914 132 1.608 0.756 0.852 - - - - - - - short chain dehydrogenase/reductase family 42E, member 2 [Source:ZFIN;Acc:ZDB-GENE-101203-3]
32. fah ENSDARG00000101762 274 1.592 0.804 - - - - 0.788 - - - fumarylacetoacetate hydrolase (fumarylacetoacetase) [Source:ZFIN;Acc:ZDB-GENE-030131-1091]
33. vps33b ENSDARG00000044813 177 1.584 0.850 - 0.734 - - - - - - vacuolar protein sorting 33B [Source:ZFIN;Acc:ZDB-GENE-050327-73]
34. ENSDARG00000051828 ENSDARG00000051828 47 1.577 0.718 - - - - - - - 0.859
35. CU459160.1 CU459160.1 104 1.573 - - - - 0.758 0.815 - - -
36. ATP9A ENSDARG00000115869 9 1.546 0.812 - - - - - - 0.734 - ATPase phospholipid transporting 9A (putative) [Source:HGNC Symbol;Acc:HGNC:13540]
37. zgc:110410 ENSDARG00000055138 67 1.516 - - - - 0.703 0.813 - - - zgc:110410 [Source:ZFIN;Acc:ZDB-GENE-050522-465]
38. mir10b-2 116 1.516 0.809 - 0.707 - - - - - - microRNA 10b-2
39. si:ch211-103a14.1 si:ch211-103a14.1 1 1 - 1.000 - - - - - - -
40. si:dkey-22o20.2 si:dkey-22o20.2 1 1 - - - - - - - - 1.000
41. sept4a ENSDARG00000010385 75 1 - 1.000 - - - - - - - septin 4a [Source:ZFIN;Acc:ZDB-GENE-051120-87]
42. cntnap5a ENSDARG00000073920 39 1 - 1.000 - - - - - - - contactin associated protein-like 5a [Source:ZFIN;Acc:ZDB-GENE-081105-126]
43. megf8 ENSDARG00000079751, ENSDARG00000103934 1 1 - 1.000 - - - - - - - multiple EGF-like-domains 8 [Source:ZFIN;Acc:ZDB-GENE-090730-1]
44. slc35f3a ENSDARG00000075909 1 1 - 1.000 - - - - - - - solute carrier family 35, member F3a [Source:ZFIN;Acc:ZDB-GENE-080204-20]
45. anks4b ENSDARG00000036846 8 1 - 1.000 - - - - - - - ankyrin repeat and sterile alpha motif domain containing 4B [Source:ZFIN;Acc:ZDB-GENE-040704-29]
46. CU302326.2 CU302326.2 54 1 - 1.000 - - - - - - -
47. neurod2 ENSDARG00000016854 6 1 - 1.000 - - - - - - - neurogenic differentiation 2 [Source:ZFIN;Acc:ZDB-GENE-010608-3]
48. atn1 ENSDARG00000092067 257 1 - 1.000 - - - - - - - atrophin 1 [Source:ZFIN;Acc:ZDB-GENE-030131-426]
49. CA4 CA4 1 1 - 1.000 - - - - - - -
50. dnaaf3 ENSDARG00000092662 20 1 - 1.000 - - - - - - - dynein, axonemal, assembly factor 3 [Source:ZFIN;Acc:ZDB-GENE-091204-296]
51. zp3a.1 ENSDARG00000042129 18 1 - 1.000 - - - - - - - zona pellucida glycoprotein 3a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-040727-1]
52. F13A1 F13A1 1 1 - 1.000 - - - - - - -
53. QSOX2 ENSDARG00000077174 26 1 - 1.000 - - - - - - - quiescin Q6 sulfhydryl oxidase 2 [Source:ZFIN;Acc:ZDB-GENE-110203-4]
54. cx50.5 cx50.5 15 1 - 1.000 - - - - - - -
55. rapgef5b ENSDARG00000074307 112 1 - 1.000 - - - - - - - Rap guanine nucleotide exchange factor (GEF) 5b [Source:ZFIN;Acc:ZDB-GENE-061215-2]
56. si:dkey-85n7.11 si:dkey-85n7.11 2 1 - 1.000 - - - - - - -
57. zgc:172282 ENSDARG00000105059 64 1 - 1.000 - - - - - - - zgc:172282 [Source:ZFIN;Acc:ZDB-GENE-080219-38]
58. ENSDARG00000088164 ENSDARG00000088164 59 1 - 1.000 - - - - - - -
59. si:ch211-223f7.1 si:ch211-223f7.1 38 1 - 1.000 - - - - - - -
60. si:ch211-145h19.1 31 1 - 1.000 - - - - - - - si:ch211-145h19.1
61. spo11 ENSDARG00000013837 7 1 - 1.000 - - - - - - - SPO11 meiotic protein covalently bound to DSB [Source:ZFIN;Acc:ZDB-GENE-040426-1900]
62. MFAP4_4 MFAP4_4 9 1 - 1.000 - - - - - - -
63. HMBOX1 HMBOX1 67 1 - 1.000 - - - - - - -
64. BX511182.1 BX511182.1 8 1 - 1.000 - - - - - - -
65. CABZ01081674.1 CABZ01081674.1 15 1 - 1.000 - - - - - - -
66. cabp1a ENSDARG00000019990 110 1 - 1.000 - - - - - - - calcium binding protein 1a [Source:ZFIN;Acc:ZDB-GENE-041010-36]
67. USP53 USP53 5 1 - 1.000 - - - - - - -
68. si:ch73-115f13.1 si:ch73-115f13.1 15 1 - 1.000 - - - - - - -
69. BX682552.2_1 BX682552.2_1 37 1 - 1.000 - - - - - - -
70. si:ch73-381a20.2 si:ch73-381a20.2 11 1 - 1.000 - - - - - - -
71. si:dkey-15h19.3 si:dkey-15h19.3 5 1 - 1.000 - - - - - - -
72. si:ch211-79g12.1 ENSDARG00000116692 2 1 - 1.000 - - - - - - - si:ch211-79g12.1 [Source:ZFIN;Acc:ZDB-GENE-110914-69]
73. si:ch211-253d24.2 si:ch211-253d24.2 12 1 - 1.000 - - - - - - -
74. si:busm1-180g5.7 si:busm1-180g5.7 15 1 - - - - 1.000 - - - -
75. si:ch211-113a14.14_1 si:ch211-113a14.14_1 7 1 - 1.000 - - - - - - -
76. oxgr1a.1 ENSDARG00000033684 24 1 - 1.000 - - - - - - - oxoglutarate (alpha-ketoglutarate) receptor 1a, tandem duplicate 1 [Source:ZFIN;Acc:ZDB-GENE-060421-6734]
77. afap1l1a ENSDARG00000089162, ENSDARG00000116849, ENSDARG00000117182 4 1 - - - - - - - - 1.000 actin filament associated protein 1-like 1a [Source:ZFIN;Acc:ZDB-GENE-050913-76]
78. asic2 ENSDARG00000006849 18 1 - 1.000 - - - - - - - acid-sensing (proton-gated) ion channel 2 [Source:ZFIN;Acc:ZDB-GENE-040513-4]
79. MAP7_1 MAP7_1 42 1 - 1.000 - - - - - - -
80. si:dkey-176g1.4 si:dkey-176g1.4 1 1 - 1.000 - - - - - - -
81. si:dkey-25i10.5 si:dkey-25i10.5 18 1 - 1.000 - - - - - - -
82. EFEMP1 32 1 - 1.000 - - - - - - - EGF containing fibulin-like extracellular matrix protein 1, transcript variant X1
83. PBRM1 ENSDARG00000003877 225 1 - 1.000 - - - - - - - polybromo 1 [Source:ZFIN;Acc:ZDB-GENE-080926-4]
84. ugt5e1 ENSDARG00000058048 25 1 - 1.000 - - - - - - - UDP glucuronosyltransferase 5 family, polypeptide E1 [Source:ZFIN;Acc:ZDB-GENE-081105-106]
85. kcnc1b ENSDARG00000032959, ENSDARG00000113595 36 1 - 1.000 - - - - - - - potassium voltage-gated channel, Shaw-related subfamily, member 1b [Source:ZFIN;Acc:ZDB-GENE-080414-3]
86. bgna ENSDARG00000017884 9 1 - 1.000 - - - - - - - biglycan a [Source:ZFIN;Acc:ZDB-GENE-040704-74]
87. aftphb ENSDARG00000071347 161 1 - 1.000 - - - - - - - aftiphilin b [Source:ZFIN;Acc:ZDB-GENE-060503-388]
88. ctso ENSDARG00000052855 29 1 - 1.000 - - - - - - - cathepsin O [Source:ZFIN;Acc:ZDB-GENE-080724-8]
89. BX957311.1 ENSDARG00000097710 1 1 - 1.000 - - - - - - -
90. CABZ01061914.2 CABZ01061914.2 2 1 - 1.000 - - - - - - -
91. Metazoa_SRP_19 Metazoa_SRP_19 17 1 - 1.000 - - - - - - -
92. sumo2a ENSDARG00000104390 4 1 - 1.000 - - - - - - - small ubiquitin-like modifier 2a [Source:ZFIN;Acc:ZDB-GENE-120215-155]
93. pcolce2a ENSDARG00000008450 22 1 - 1.000 - - - - - - - procollagen C-endopeptidase enhancer 2a [Source:ZFIN;Acc:ZDB-GENE-070705-25]
94. PGBD4_4 PGBD4_4 15 1 - 1.000 - - - - - - -
95. SNTB2 ENSDARG00000051763 2 1 - 1.000 - - - - - - - syntrophin, beta 2 [Source:ZFIN;Acc:ZDB-GENE-131121-511]
96. si:ch211-119c24.1 si:ch211-119c24.1 17 1 - 1.000 - - - - - - -
97. CABZ01070007.1 CABZ01070007.1 5 1 - 1.000 - - - - - - -
98. LRRC38 LRRC38 5 1 - - - - - - - - 1.000
99. ABR ENSDARG00000095180 4 1 - 1.000 - - - - - - - ABR, RhoGEF and GTPase activating protein [Source:ZFIN;Acc:ZDB-GENE-070705-146]
100. EGR4_1 EGR4_1 14 1 - 1.000 - - - - - - -

There are 1134 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA