Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

Zebrafish data search


search
Exact
Search
Limit to:

{{libname.name}} 

Results for tlx1

Gene Name Gene ID Reads Annotation
tlx1 ENSDARG00000003965 67 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]










Genes with expression patterns similar to tlx1

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tlx1 ENSDARG00000003965 67 7 1.000 - 1.000 1.000 1.000 1.000 - 1.000 1.000 T cell leukemia homeobox 1 [Source:ZFIN;Acc:ZDB-GENE-021021-2]
2. tnnt2a ENSDARG00000020610 313 2.362 - - - 0.710 - - - 0.729 0.923 troponin T type 2a (cardiac) [Source:ZFIN;Acc:ZDB-GENE-000626-1]
3. hand2 ENSDARG00000008305 1214 2.315 - - - 0.716 - - - 0.777 0.822 heart and neural crest derivatives expressed 2 [Source:ZFIN;Acc:ZDB-GENE-000511-1]
4. KSR1 KSR1 8 2 1.000 - - - - 1.000 - - -
5. grtp1b ENSDARG00000030269 24 2 1.000 - - - - 1.000 - - - growth hormone regulated TBC protein 1b [Source:ZFIN;Acc:ZDB-GENE-050417-346]
6. ikzf1 ENSDARG00000013539 94 1.803 1.000 - - - - 0.803 - - - IKAROS family zinc finger 1 (Ikaros) [Source:ZFIN;Acc:ZDB-GENE-980526-304]
7. TIMP4 TIMP4 599 1.755 0.950 - - 0.805 - - - - -
8. BX571811.1 ENSDARG00000105621 25 1.752 1.000 - - - - - - 0.752 -
9. COL9A1 COL9A1 264 1.692 - - - - - - - 0.810 0.882
10. phox2a ENSDARG00000007406 470 1.664 0.950 - - - - - - 0.714 - paired-like homeobox 2a [Source:ZFIN;Acc:ZDB-GENE-000223-14]
11. ASAP1 ASAP1 47 1.636 0.932 - - - - - - 0.704 -
12. foxi1 ENSDARG00000104566 176 1.609 - - - - 0.750 - - - 0.859 forkhead box i1 [Source:ZFIN;Acc:ZDB-GENE-030505-1]
13. cmlc1 ENSDARG00000032976 455 1.582 - - - - - - - 0.717 0.865 cardiac myosin light chain-1 [Source:ZFIN;Acc:ZDB-GENE-030522-1]
14. tnnc1a ENSDARG00000011400 165 1.577 - - - - - - - 0.761 0.816 troponin C type 1a (slow) [Source:ZFIN;Acc:ZDB-GENE-030523-1]
15. tbx20 ENSDARG00000005150 335 1.549 - - - - - - - 0.787 0.762 T-box 20 [Source:ZFIN;Acc:ZDB-GENE-000427-7]
16. nkx2.5 ENSDARG00000018004, ENSDARG00000116714 23 1.529 - - - - - - - 0.780 0.749 NK2 homeobox 5 [Source:ZFIN;Acc:ZDB-GENE-980526-321]
17. ponzr5 ENSDARG00000055046, ENSDARG00000115684 1093 1.521 - - - - - - - 0.758 0.763 plac8 onzin related protein 5 [Source:ZFIN;Acc:ZDB-GENE-081104-325]
18. foxl2 61 1.518 - - 0.784 - 0.734 - - - - forkhead box L2, transcript variant X1
19. fhl2a ENSDARG00000042018 244 1.516 - - - 0.749 - - - - 0.767 four and a half LIM domains 2a [Source:ZFIN;Acc:ZDB-GENE-040808-49]
20. acta2 ENSDARG00000045180 96 1.513 - - - - 0.720 - - - 0.793 actin, alpha 2, smooth muscle, aorta [Source:ZFIN;Acc:ZDB-GENE-030131-1229]
21. foxf2a ENSDARG00000017195 345 1.502 - - - 0.773 - - - 0.729 - forkhead box F2a [Source:ZFIN;Acc:ZDB-GENE-110407-5]
22. DYDC2 ENSDARG00000101848 2 1 - - - - - 1.000 - - - DPY30 domain containing 2 [Source:ZFIN;Acc:ZDB-GENE-121030-3]
23. kitb ENSDARG00000056133, ENSDARG00000113747 10 1 - - - - - 1.000 - - - v-kit Hardy-Zuckerman 4 feline sarcoma viral oncogene homolog b [Source:ZFIN;Acc:ZDB-GENE-050916-2]
24. mms22l ENSDARG00000074691 232 1 - - - - - 1.000 - - - MMS22-like, DNA repair protein [Source:ZFIN;Acc:ZDB-GENE-030131-3869]
25. DNHD1 DNHD1 4 1 1.000 - - - - - - - -
26. slc17a8 ENSDARG00000057728, ENSDARG00000109791 8 1 - - - - - 1.000 - - - solute carrier family 17 (vesicular glutamate transporter), member 8 [Source:ZFIN;Acc:ZDB-GENE-060503-416]
27. hsc70 ENSDARG00000012381 961 1 1.000 - - - - - - - - heat shock cognate 70 [Source:ZFIN;Acc:ZDB-GENE-040426-1221]
28. snx33 ENSDARG00000014954 45 1 - - - - - 1.000 - - - sorting nexin 33 [Source:ZFIN;Acc:ZDB-GENE-041111-209]
29. CU855880.2 CU855880.2 3 1 - - - - - 1.000 - - -
30. grk7a ENSDARG00000020602 10 1 - - - - - 1.000 - - - G protein-coupled receptor kinase 7a [Source:ZFIN;Acc:ZDB-GENE-050824-1]
31. mybpc2a ENSDARG00000030157 11 1 - - - - - 1.000 - - - myosin binding protein C, fast type a [Source:ZFIN;Acc:ZDB-GENE-060901-1]
32. chrna9 ENSDARG00000054680 4 1 - - - - - 1.000 - - - cholinergic receptor, nicotinic, alpha 9 [Source:ZFIN;Acc:ZDB-GENE-090312-63]
33. si:dkey-46g23.2 ENSDARG00000115817 11 1 - - - - - 1.000 - - - si:dkey-46g23.2 [Source:ZFIN;Acc:ZDB-GENE-070705-476]
34. CU638695.1 CU638695.1 90 1 - - - - - 1.000 - - -
35. si:dkey-126g1.6 si:dkey-126g1.6 1 1 - - - - - 1.000 - - -
36. rpap3 ENSDARG00000087962 22 1 - - - - - 1.000 - - - RNA polymerase II associated protein 3 [Source:ZFIN;Acc:ZDB-GENE-040426-928]
37. si:ch211-157l15.4 si:ch211-157l15.4 92 1 - - - - - 1.000 - - -
38. BX936386.1 ENSDARG00000097166 5 1 - - - - - 1.000 - - -
39. si:ch211-106h4.5 ENSDARG00000095059 1 1 - - - - - 1.000 - - - si:ch211-106h4.5 [Source:ZFIN;Acc:ZDB-GENE-070705-15]
40. BX927237.2 BX927237.2 16 1 1.000 - - - - - - - -
41. macrod1 ENSDARG00000029609 66 1 - - - - - 1.000 - - - MACRO domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-040912-100]
42. cyb561 ENSDARG00000038176 55 1 - - - - - 1.000 - - - cytochrome b561 [Source:ZFIN;Acc:ZDB-GENE-070713-3]
43. PRKCA ENSDARG00000099841 2 1 1.000 - - - - - - - - protein kinase C alpha [Source:HGNC Symbol;Acc:HGNC:9393]
44. acanb ENSDARG00000045799, ENSDARG00000113408 2 1 - - - - - 1.000 - - - aggrecan b [Source:ZFIN;Acc:ZDB-GENE-100422-16]
45. mif4gdb ENSDARG00000102578 31 1 - - - - - 1.000 - - - MIF4G domain containing b [Source:ZFIN;Acc:ZDB-GENE-050227-7]
46. si:dkey-30j22.3 si:dkey-30j22.3 17 1 1.000 - - - - - - - -
47. KCNA2 KCNA2 66 1 - - - - - 1.000 - - -
48. si:dkeyp-80c12.4 ENSDARG00000036479 7 1 - - - - - 1.000 - - - si:dkeyp-80c12.4 [Source:ZFIN;Acc:ZDB-GENE-090313-403]
49. casd1 ENSDARG00000023900 12 1 1.000 - - - - - - - - CAS1 domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-060503-329]
50. tshb tshb 7 1 - - - - - 1.000 - - -
51. scn4aa ENSDARG00000098738, ENSDARG00000113568 5 1 1.000 - - - - - - - - sodium channel, voltage-gated, type IV, alpha, a [Source:ZFIN;Acc:ZDB-GENE-051201-2]
52. agmat ENSDARG00000059700 9 1 1.000 - - - - - - - - agmatine ureohydrolase (agmatinase) [Source:ZFIN;Acc:ZDB-GENE-060929-696]
53. plxdc1 ENSDARG00000078417 41 1 1.000 - - - - - - - - plexin domain containing 1 [Source:ZFIN;Acc:ZDB-GENE-081104-391]
54. hcar1-4 ENSDARG00000087084, ENSDARG00000113450 27 1 1.000 - - - - - - - - hydroxycarboxylic acid receptor 1-4 [Source:ZFIN;Acc:ZDB-GENE-111111-10]
55. hapln2 ENSDARG00000003903 13 1 1.000 - - - - - - - - hyaluronan and proteoglycan link protein 2 [Source:ZFIN;Acc:ZDB-GENE-030131-8089]
56. MFAP4_7 MFAP4_7 43 1 - - - - - 1.000 - - -
57. zbtb47a ENSDARG00000057751 1 1 - - - - - 1.000 - - - zinc finger and BTB domain containing 47a [Source:ZFIN;Acc:ZDB-GENE-081104-121]
58. si:dkey-238o14.8 si:dkey-238o14.8 32 1 - - - - - 1.000 - - -
59. cd8a ENSDARG00000044797 7 1 - - - - - 1.000 - - - CD8a molecule [Source:ZFIN;Acc:ZDB-GENE-060210-2]
60. ugt2a6 ENSDARG00000039501 5 1 - - - - - 1.000 - - - UDP glucuronosyltransferase 2 family, polypeptide A6 [Source:ZFIN;Acc:ZDB-GENE-081104-3]
61. BX248122.1 ENSDARG00000112449 1 1 - - - - - 1.000 - - - gastrula zinc finger protein XlCGF57.1-like [Source:NCBI gene;Acc:103910472]
62. BX511021.2 ENSDARG00000097646 5 1 - - - - - 1.000 - - -
63. calml4a ENSDARG00000075800 14 1 - - - - - 1.000 - - - calmodulin-like 4a [Source:ZFIN;Acc:ZDB-GENE-081022-9]
64. CABZ01117575.1 CABZ01117575.1 1 1 - - - - - 1.000 - - -
65. rhoh ENSDARG00000070121 1 1 - - - - - 1.000 - - - ras homolog family member H [Source:ZFIN;Acc:ZDB-GENE-060228-7]
66. MFRP MFRP 6 1 - - - - - 1.000 - - -
67. wu:fe38f03 wu:fe38f03 22 1 - - - - - 1.000 - - -
68. si:ch211-261n9.2 si:ch211-261n9.2 4 1 - - - - - 1.000 - - -
69. zgc:194285 ENSDARG00000078423 27 1 1.000 - - - - - - - - zgc:194285 [Source:ZFIN;Acc:ZDB-GENE-081022-97]
70. rs1 rs1 70 1 - - - - - 1.000 - - -
71. fermt3b ENSDARG00000030938 17 1 - - - - - 1.000 - - - fermitin family member 3b [Source:ZFIN;Acc:ZDB-GENE-040426-1366]
72. dnajc5b ENSDARG00000058147 6 1 - - - - - 1.000 - - - DnaJ (Hsp40) homolog, subfamily C, member 5 beta [Source:ZFIN;Acc:ZDB-GENE-050413-1]
73. hsd17b1 ENSDARG00000027469 11 1 1.000 - - - - - - - - hydroxysteroid (17-beta) dehydrogenase 1 [Source:ZFIN;Acc:ZDB-GENE-040901-5]
74. TGFBR3L TGFBR3L 16 1 - - - - - 1.000 - - -
75. FASN ENSDARG00000087657 18 1 - - - - - 1.000 - - - fatty acid synthase [Source:ZFIN;Acc:ZDB-GENE-030131-7802]
76. crygm3 ENSDARG00000078189, ENSDARG00000112851 6 1 - - - - - 1.000 - - - crystallin, gamma M3 [Source:ZFIN;Acc:ZDB-GENE-050516-6]
77. ttr ENSDARG00000037191 11 1 - - - - - 1.000 - - - transthyretin (prealbumin, amyloidosis type I) [Source:ZFIN;Acc:ZDB-GENE-040927-14]
78. racgap1 ENSDARG00000015460 38 1 - - - - - 1.000 - - - Rac GTPase activating protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-1917]
79. cyp3c1l2 cyp3c1l2 53 1 1.000 - - - - - - - -
80. sh3bp1 ENSDARG00000078119 5 1 - - - - - 1.000 - - - SH3-domain binding protein 1 [Source:ZFIN;Acc:ZDB-GENE-121128-2]
81. TMC5 ENSDARG00000013252 22 1 - - - - - 1.000 - - - transmembrane channel like 5 [Source:ZFIN;Acc:ZDB-GENE-120411-6]
82. cryba2a ENSDARG00000030349 1342 1 - - - - - 1.000 - - - crystallin, beta A2a [Source:ZFIN;Acc:ZDB-GENE-040625-8]
83. or111-3 ENSDARG00000086633 1 1 - - - - - 1.000 - - - odorant receptor, family D, subfamily 111, member 3 [Source:ZFIN;Acc:ZDB-GENE-010308-17]
84. pnp6 ENSDARG00000040942, ENSDARG00000114753 10 1 - - - - - 1.000 - - - purine nucleoside phosphorylase 6 [Source:ZFIN;Acc:ZDB-GENE-040426-1800]
85. CR388046.1_1 ENSDARG00000102930 1 1 - - - - - 1.000 - - -
86. dis3 ENSDARG00000060559, ENSDARG00000110345 92 1 - - - - - 1.000 - - - DIS3 exosome endoribonuclease and 3'-5' exoribonuclease [Source:ZFIN;Acc:ZDB-GENE-080213-3]
87. zgc:174945 ENSDARG00000062057, ENSDARG00000112119 3 1 - - - - - 1.000 - - - zgc:174945 [Source:ZFIN;Acc:ZDB-GENE-080204-80]
88. zgc:113389 zgc:113389 123 1 - - - - - 1.000 - - -
89. BX324215.1 BX324215.1 2 1 - - - - - 1.000 - - -
90. meox2b ENSDARG00000061818, ENSDARG00000116206 62 1 1.000 - - - - - - - - mesenchyme homeobox 2b [Source:ZFIN;Acc:ZDB-GENE-060503-853]
91. EML4 7 1 - - - - - 1.000 - - - echinoderm microtubule associated protein like 4
92. ENTPD5 ENTPD5 42 1 - - - - - 1.000 - - -
93. si:dkey-43k4.4 si:dkey-43k4.4 4 1 - - - - - 1.000 - - -
94. cdc14aa ENSDARG00000013858 18 1 - - - - - 1.000 - - - cell division cycle 14Aa [Source:ZFIN;Acc:ZDB-GENE-040426-1214]
95. si:ch211-157c18.3 si:ch211-157c18.3 8 1 1.000 - - - - - - - -
96. RBM44 RBM44 25 1 - - - - - 1.000 - - -
97. C20H2orf71 C20H2orf71 2 1 - - - - - 1.000 - - -
98. si:dkey-222f2.3 si:dkey-222f2.3 8 1 1.000 - - - - - - - -
99. tnfsf10l3 ENSDARG00000032746 37 1 1.000 - - - - - - - - tumor necrosis factor (ligand) superfamily, member 10 like 3 [Source:ZFIN;Acc:ZDB-GENE-070606-1]
100. SLC15A5 ENSDARG00000089974 18 1 1.000 - - - - - - - - solute carrier family 15 member 5 [Source:HGNC Symbol;Acc:HGNC:33455]

There are 449 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
Robin Lab - 2019 © Hubrecht Institute | Berezikov Lab - 2019 © ERIBA