Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tlr4ba

Gene Name Gene ID Reads Annotation
tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]










Genes with expression patterns similar to tlr4ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
2. zgc:173443 ENSDARG00000034403 26 1.781 - - - - - - 0.933 - 0.848 zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
3. sod3b ENSDARG00000079183 39 1.669 - - - - - - 0.922 - 0.747 superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
4. stc1 ENSDARG00000003303 28 1.604 - - - 0.736 - - 0.868 - - stanniocalcin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-79]
5. dio2 ENSDARG00000094857 17 1 - - - - - - 1.000 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
6. mctp1b ENSDARG00000060871 20 1 - - - - - - 1.000 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
7. NFATC4 ENSDARG00000054162 44 1 - - - - - - 1.000 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
8. si:ch211-63o20.7 ENSDARG00000042000 93 1 - - - - - - 1.000 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
9. si:ch211-152p11.8 46 1 - - - - - - 1.000 - - si:ch211-152p11.8, transcript variant X2
10. kcnip3a ENSDARG00000034229 63 1 - - - - - - 1.000 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
11. si:ch73-60p2.1 si:ch73-60p2.1 21 1 - - - - - - 1.000 - -
12. CU570691.1 ENSDARG00000088908 5 1 - - - - - - - 1.000 -
13. osgin2 ENSDARG00000040302 45 0.988 - - - - - - 0.988 - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
14. ubxn1_1 ENSDARG00000090309 38 0.984 - - - - - - 0.984 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
15. si:ch211-237l4.6 ENSDARG00000056915 49 0.976 - - - - - - 0.976 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
16. SLC37A3 176 0.963 - - - - - - 0.963 - - solute carrier family 37 member 3, transcript variant X4
17. CABZ01111953.1 ENSDARG00000099747 38 0.961 - - - - - - 0.961 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
18. ENSDARG00000092910 ENSDARG00000092910 44 0.96 - - - - - - 0.960 - -
19. kcnt1 ENSDARG00000079484 45 0.96 - - - - - - 0.960 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
20. traf3ip1 ENSDARG00000010300 69 0.96 - - - - - - 0.960 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
21. si:dkey-10p5.7 26 0.96 - - - - - - 0.960 - - si:dkey-10p5.7
22. bmp6 ENSDARG00000015686 211 0.96 - - - - - - 0.960 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
23. WNK3 WNK3 36 0.96 - - - - - - 0.960 - -
24. NUFIP1 ENSDARG00000101024 229 0.954 - - - - - - 0.954 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
25. BX510934.1 ENSDARG00000087544 140 0.942 - - - - - - 0.942 - -
26. drd4-rs ENSDARG00000001912 45 0.942 - - - - - - 0.942 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
27. rabggta ENSDARG00000061024 332 0.934 - - - - - - 0.934 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
28. gabrr2b ENSDARG00000014057 9 0.933 - - - - - - 0.933 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
29. lzts2b ENSDARG00000077207 22 0.933 - - - - - - 0.933 - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
30. nr6a1a ENSDARG00000096224, ENSDARG00000101508 24 0.933 - - - - - - 0.933 - - nuclear receptor subfamily 6, group A, member 1a [Source:ZFIN;Acc:ZDB-GENE-991207-19]
31. lratb 3 0.933 - - - - - - 0.933 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
32. si:dkey-41e15.4 si:dkey-41e15.4 1 0.933 - - - - - - 0.933 - -
33. si:ch73-77n15.1 si:ch73-77n15.1 2 0.933 - - - - - - 0.933 - -
34. CU104716.2 CU104716.2 10 0.933 - - - - - - 0.933 - -
35. CR762480.2 ENSDARG00000102728 1 0.933 - - - - - - 0.933 - -
36. slc6a2 ENSDARG00000016141 49 0.933 - - - - - - 0.933 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
37. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 0.933 - - - - - - 0.933 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
38. si:dkey-58f10.11 ENSDARG00000094935 1 0.933 - - - - - - 0.933 - - si:dkey-58f10.11 [Source:ZFIN;Acc:ZDB-GENE-060526-313]
39. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 0.933 - - - - - - 0.933 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
40. CABZ01031933.1 CABZ01031933.1 1 0.933 - - - - - - 0.933 - -
41. avpr2aa ENSDARG00000007436 43 0.933 - - - - - - 0.933 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
42. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 0.933 - - - - - - 0.933 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
43. BX511021.2 ENSDARG00000097646 5 0.933 - - - - - - 0.933 - -
44. U1_38 U1_38 1 0.933 - - - - - - 0.933 - -
45. si:ch1073-181h11.2 ENSDARG00000103883 24 0.933 - - - - - - 0.933 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
46. zgc:152977 ENSDARG00000077178 59 0.933 - - - - - - 0.933 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
47. CELA1 CELA1 14 0.933 - - - - - - 0.933 - -
48. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 0.933 - - - - - - 0.933 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
49. tbx5b ENSDARG00000092060 37 0.933 - - - - - - 0.933 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
50. ubr1 ENSDARG00000060480 71 0.933 - - - - - - 0.933 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
51. ppp2r3a ENSDARG00000077722 7 0.933 - - - - - - 0.933 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
52. grk7b ENSDARG00000055534 17 0.933 - - - - - - 0.933 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
53. U1_35 U1_35 1 0.933 - - - - - - 0.933 - -
54. mtus2 mtus2 22 0.933 - - - - - - 0.933 - -
55. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 0.933 - - - - - - 0.933 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
56. top3b ENSDARG00000027586 8 0.933 - - - - - - 0.933 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
57. zp2.5 ENSDARG00000086522 15 0.933 - - - - - - 0.933 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
58. si:ch211-233h19.2 ENSDARG00000042213 47 0.933 - - - - - - 0.933 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
59. si:ch73-189n23.1 ENSDARG00000086247 15 0.933 - - - - - - 0.933 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
60. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.933 - - - - - - 0.933 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
61. CR387932.1 ENSDARG00000097344 2 0.933 - - - - - - 0.933 - -
62. CU929052.1 CU929052.1 642 0.933 - - - - - - 0.933 - -
63. g6pcb ENSDARG00000014967 8 0.933 - - - - - - 0.933 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
64. CLNK 8 0.933 - - - - - - 0.933 - - cytokine dependent hematopoietic cell linker
65. mmrn2a ENSDARG00000076135 37 0.933 - - - - - - 0.933 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
66. BX901974.1 ENSDARG00000067592 2 0.933 - - - - - - 0.933 - -
67. FAM177B 9 0.933 - - - - - - 0.933 - - family with sequence similarity 177 member B
68. si:ch211-283l16.1 ENSDARG00000112586 131 0.933 - - - - - - 0.933 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
69. CYP27A1_2 CYP27A1_2 5 0.933 - - - - - - 0.933 - -
70. irgq2 ENSDARG00000068657 4 0.933 - - - - - - 0.933 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
71. si:ch73-248e21.5 ENSDARG00000088283 19 0.933 - - - - - - 0.933 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
72. si:dkey-122c11.1 ENSDARG00000093747 19 0.933 - - - - - - 0.933 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
73. gata4 ENSDARG00000098952 11 0.933 - - - - - - 0.933 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
74. pdcb ENSDARG00000017634 10 0.933 - - - - - - 0.933 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
75. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.933 - - - - - - 0.933 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
76. C25H12orf29 C25H12orf29 31 0.933 - - - - - - 0.933 - -
77. satb2 ENSDARG00000061885 6 0.933 - - - - - - 0.933 - - SATB homeobox 2 [Source:ZFIN;Acc:ZDB-GENE-070912-212]
78. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 0.933 - - - - - - 0.933 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
79. si:ch211-234c11.3_1 ENSDARG00000093615 10 0.933 - - - - - - 0.933 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
80. PCDH10 PCDH10 7 0.933 - - - - - - 0.933 - -
81. pigr ENSDARG00000101890 10 0.933 - - - - - - 0.933 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
82. zgc:172133 ENSDARG00000075248 6 0.933 - - - - - - 0.933 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
83. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 0.933 - - - - - - 0.933 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
84. BX537305.1 ENSDARG00000113834 10 0.933 - - - - - - 0.933 - -
85. CR762480.5 CR762480.5 1 0.933 - - - - - - 0.933 - -
86. si:ch211-190k17.13 si:ch211-190k17.13 48 0.933 - - - - - - 0.933 - -
87. b3gat3 ENSDARG00000001939 58 0.933 - - - - - - 0.933 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
88. TMEM138 ENSDARG00000090543 105 0.933 - - - - - - 0.933 - - transmembrane protein 138 [Source:ZFIN;Acc:ZDB-GENE-120912-1]
89. CABZ01002626.1 CABZ01002626.1 29 0.933 - - - - - - 0.933 - -
90. nanog ENSDARG00000075113 10 0.933 - - - - - - 0.933 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
91. slc5a1 ENSDARG00000013871 4 0.933 - - - - - - 0.933 - - solute carrier family 5 (sodium/glucose cotransporter), member 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1524]
92. traf1 ENSDARG00000069482 50 0.933 - - - - - - 0.933 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
93. CU855711.1 ENSDARG00000088643 6 0.933 - - - - - - 0.933 - - legumain-like [Source:NCBI gene;Acc:108191752]
94. SPDEF ENSDARG00000029930 60 0.933 - - - - - - 0.933 - - SAM pointed domain containing ETS transcription factor [Source:HGNC Symbol;Acc:HGNC:17257]
95. si:dkey-261l7.2 ENSDARG00000094345 51 0.933 - - - - - - 0.933 - - si:dkey-261l7.2 [Source:ZFIN;Acc:ZDB-GENE-090313-288]
96. irx4a ENSDARG00000035648 71 0.933 - - - - - - 0.933 - - iroquois homeobox 4a [Source:ZFIN;Acc:ZDB-GENE-040426-1825]
97. si:ch211-239f4.6 ENSDARG00000093347 2 0.933 - - - - - - 0.933 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
98. zgc:152670 ENSDARG00000017038, ENSDARG00000117151 587 0.933 - - - - - - 0.933 - - zgc:152670 [Source:ZFIN;Acc:ZDB-GENE-060929-954]
99. CR854891.1 CR854891.1 7 0.933 - - - - - - 0.933 - -
100. TRIM8 TRIM8 5 0.933 - - - - - - 0.933 - -

There are 544 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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