Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tlr4ba

Gene Name Gene ID Reads Annotation
tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]










Genes with expression patterns similar to tlr4ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
2. zgc:173443 ENSDARG00000034403 26 1.781 - - - - - - 0.933 - 0.848 zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
3. sod3b ENSDARG00000079183 39 1.669 - - - - - - 0.922 - 0.747 superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
4. stc1 ENSDARG00000003303 28 1.604 - - - 0.736 - - 0.868 - - stanniocalcin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-79]
5. kcnip3a ENSDARG00000034229 63 1 - - - - - - 1.000 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
6. CU570691.1 ENSDARG00000088908 5 1 - - - - - - - 1.000 -
7. si:ch211-63o20.7 ENSDARG00000042000 93 1 - - - - - - 1.000 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
8. si:ch211-152p11.8 46 1 - - - - - - 1.000 - - si:ch211-152p11.8, transcript variant X2
9. NFATC4 ENSDARG00000054162 44 1 - - - - - - 1.000 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
10. dio2 ENSDARG00000094857 17 1 - - - - - - 1.000 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
11. mctp1b ENSDARG00000060871 20 1 - - - - - - 1.000 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
12. si:ch73-60p2.1 si:ch73-60p2.1 21 1 - - - - - - 1.000 - -
13. osgin2 ENSDARG00000040302 45 0.988 - - - - - - 0.988 - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
14. ubxn1_1 ENSDARG00000090309 38 0.984 - - - - - - 0.984 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
15. si:ch211-237l4.6 ENSDARG00000056915 49 0.976 - - - - - - 0.976 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
16. SLC37A3 176 0.963 - - - - - - 0.963 - - solute carrier family 37 member 3, transcript variant X4
17. CABZ01111953.1 ENSDARG00000099747 38 0.961 - - - - - - 0.961 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
18. ENSDARG00000092910 ENSDARG00000092910 44 0.96 - - - - - - 0.960 - -
19. WNK3 WNK3 36 0.96 - - - - - - 0.960 - -
20. si:dkey-10p5.7 26 0.96 - - - - - - 0.960 - - si:dkey-10p5.7
21. bmp6 ENSDARG00000015686 211 0.96 - - - - - - 0.960 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
22. kcnt1 ENSDARG00000079484 45 0.96 - - - - - - 0.960 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
23. traf3ip1 ENSDARG00000010300 69 0.96 - - - - - - 0.960 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
24. NUFIP1 ENSDARG00000101024 229 0.954 - - - - - - 0.954 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
25. BX510934.1 ENSDARG00000087544 140 0.942 - - - - - - 0.942 - -
26. drd4-rs ENSDARG00000001912 45 0.942 - - - - - - 0.942 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
27. rabggta ENSDARG00000061024 332 0.934 - - - - - - 0.934 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
28. CLNK 8 0.933 - - - - - - 0.933 - - cytokine dependent hematopoietic cell linker
29. XKR8 XKR8 9 0.933 - - - - - - 0.933 - -
30. TRIM8 TRIM8 5 0.933 - - - - - - 0.933 - -
31. BX511021.2 ENSDARG00000097646 5 0.933 - - - - - - 0.933 - -
32. LRRC69 LRRC69 1 0.933 - - - - - - 0.933 - -
33. BX901974.1 ENSDARG00000067592 2 0.933 - - - - - - 0.933 - -
34. si:dkey-16p6.1_2 ENSDARG00000088245, ENSDARG00000089179, ENSDARG00000090033, ENSDARG00000090192, ENSDARG00000090734, ENSDARG00000091746, ENSDARG00000098189, ENSDARG00000098515, ENSDARG00000099262, ENSDARG00000100061, ENSDARG00000100164, ENSDARG00000101351, ENSDARG00000101689, ENSDARG00000101828, ENSDARG00000102212, ENSDARG00000104416, ENSDARG00000104897, ENSDARG00000105266, ENSDARG00000111518 1 0.933 - - - - - - 0.933 - - si:dkey-16p6.1 [Source:ZFIN;Acc:ZDB-GENE-081103-43]
35. avpr2aa ENSDARG00000007436 43 0.933 - - - - - - 0.933 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
36. CELA1 CELA1 14 0.933 - - - - - - 0.933 - -
37. lzts2b ENSDARG00000077207 22 0.933 - - - - - - 0.933 - - leucine zipper, putative tumor suppressor 2b [Source:ZFIN;Acc:ZDB-GENE-030131-9587]
38. si:dkeyp-91h9.1 si:dkeyp-91h9.1 2 0.933 - - - - - - 0.933 - -
39. CABZ01031933.1 CABZ01031933.1 1 0.933 - - - - - - 0.933 - -
40. ms4a17a.17 ENSDARG00000054898, ENSDARG00000116378 37 0.933 - - - - - - 0.933 - - membrane-spanning 4-domains, subfamily A, member 17A.17 [Source:ZFIN;Acc:ZDB-GENE-070424-27]
41. npffr1l3 ENSDARG00000010712 18 0.933 - - - - - - 0.933 - - neuropeptide FF receptor 1 like 3 [Source:ZFIN;Acc:ZDB-GENE-070424-44]
42. phf21aa ENSDARG00000006878 31 0.933 - - - - - - 0.933 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
43. zgc:172133 ENSDARG00000075248 6 0.933 - - - - - - 0.933 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
44. CU104716.2 CU104716.2 10 0.933 - - - - - - 0.933 - -
45. zp2.5 ENSDARG00000086522 15 0.933 - - - - - - 0.933 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
46. il11a ENSDARG00000037859 5 0.933 - - - - - - 0.933 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
47. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.933 - - - - - - 0.933 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
48. ZC3H12A ENSDARG00000005271 5 0.933 - - - - - - 0.933 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
49. BX323836.1 BX323836.1 1 0.933 - - - - - - 0.933 - -
50. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 0.933 - - - - - - 0.933 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
51. lratb 3 0.933 - - - - - - 0.933 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2
52. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.933 - - - - - - 0.933 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
53. CU672227.1 ENSDARG00000105807 15 0.933 - - - - - - 0.933 - -
54. si:dkeyp-3f10.17 ENSDARG00000087254 1 0.933 - - - - - - 0.933 - - si:dkeyp-3f10.17 [Source:ZFIN;Acc:ZDB-GENE-081104-467]
55. smad6b ENSDARG00000031763 12 0.933 - - - - - - 0.933 - - SMAD family member 6b [Source:ZFIN;Acc:ZDB-GENE-050419-198]
56. PLEKHS1_2 PLEKHS1_2 21 0.933 - - - - - - 0.933 - -
57. FAM177B 9 0.933 - - - - - - 0.933 - - family with sequence similarity 177 member B
58. wnt3a ENSDARG00000058822 5 0.933 - - - - - - 0.933 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
59. GALNTL6 ENSDARG00000040048 33 0.933 - - - - - - 0.933 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
60. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 0.933 - - - - - - 0.933 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
61. MMP20 MMP20 1 0.933 - - - - - - 0.933 - -
62. si:dkey-28k24.2 ENSDARG00000095106, ENSDARG00000104787, ENSDARG00000110878, ENSDARG00000116574 1 0.933 - - - - - - 0.933 - - si:dkey-28k24.2 [Source:ZFIN;Acc:ZDB-GENE-121213-4]
63. si:ch73-77n15.1 si:ch73-77n15.1 2 0.933 - - - - - - 0.933 - -
64. top3b ENSDARG00000027586 8 0.933 - - - - - - 0.933 - - DNA topoisomerase III beta [Source:ZFIN;Acc:ZDB-GENE-070705-37]
65. lim2.1 ENSDARG00000068974, ENSDARG00000114525 233 0.933 - - - - - - 0.933 - - lens intrinsic membrane protein 2.1 [Source:ZFIN;Acc:ZDB-GENE-050522-398]
66. urgcp ENSDARG00000036767 6 0.933 - - - - - - 0.933 - - upregulator of cell proliferation [Source:ZFIN;Acc:ZDB-GENE-120215-160]
67. si:dkey-56i24.1 ENSDARG00000053345, ENSDARG00000078152 11 0.933 - - - - - - 0.933 - - si:dkey-56i24.1 [Source:ZFIN;Acc:ZDB-GENE-081105-8]
68. fscn1b ENSDARG00000037747, ENSDARG00000111370 75 0.933 - - - - - - 0.933 - - fascin actin-bundling protein 1b [Source:ZFIN;Acc:ZDB-GENE-120507-1]
69. gabrr2b ENSDARG00000014057 9 0.933 - - - - - - 0.933 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
70. si:ch211-218m3.16 ENSDARG00000044336 33 0.933 - - - - - - 0.933 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
71. IYD IYD 8 0.933 - - - - - - 0.933 - -
72. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 0.933 - - - - - - 0.933 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
73. CU855711.1 ENSDARG00000088643 6 0.933 - - - - - - 0.933 - - legumain-like [Source:NCBI gene;Acc:108191752]
74. SEMA6B SEMA6B 35 0.933 - - - - - - 0.933 - -
75. si:ch211-233m11.3 si:ch211-233m11.3 1 0.933 - - - - - - 0.933 - -
76. si:ch211-234c11.3_1 ENSDARG00000093615 10 0.933 - - - - - - 0.933 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
77. si:dkey-286j17.3 si:dkey-286j17.3 8 0.933 - - - - - - 0.933 - -
78. dctn1a ENSDARG00000019743 45 0.933 - - - - - - 0.933 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
79. si:dkey-47k20.6 si:dkey-47k20.6 2 0.933 - - - - - - 0.933 - -
80. pxn pxn 10 0.933 - - - - - - 0.933 - -
81. cart1 ENSDARG00000070930 46 0.933 - - - - - - 0.933 - - cocaine- and amphetamine-regulated transcript 1 [Source:ZFIN;Acc:ZDB-GENE-030131-8025]
82. si:ch211-239f4.6 ENSDARG00000093347 2 0.933 - - - - - - 0.933 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
83. irgq2 ENSDARG00000068657 4 0.933 - - - - - - 0.933 - - immunity-related GTPase family, q2 [Source:ZFIN;Acc:ZDB-GENE-051212-7]
84. si:ch73-248e21.5 ENSDARG00000088283 19 0.933 - - - - - - 0.933 - - si:ch73-248e21.5 [Source:ZFIN;Acc:ZDB-GENE-120215-255]
85. CR387932.1 ENSDARG00000097344 2 0.933 - - - - - - 0.933 - -
86. mmrn2a ENSDARG00000076135 37 0.933 - - - - - - 0.933 - - multimerin 2a [Source:ZFIN;Acc:ZDB-GENE-080424-3]
87. sh2d1aa ENSDARG00000095348 4 0.933 - - - - - - 0.933 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
88. tbx5b ENSDARG00000092060 37 0.933 - - - - - - 0.933 - - T-box 5b [Source:ZFIN;Acc:ZDB-GENE-060601-2]
89. ubr1 ENSDARG00000060480 71 0.933 - - - - - - 0.933 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
90. b3gat3 ENSDARG00000001939 58 0.933 - - - - - - 0.933 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
91. SIKE1 2 0.933 - - - - - - 0.933 - - suppressor of IKBKE 1, transcript variant X3
92. si:ch211-190k17.13 si:ch211-190k17.13 48 0.933 - - - - - - 0.933 - -
93. FRMD7 ENSDARG00000068958 17 0.933 - - - - - - 0.933 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
94. st6galnac ENSDARG00000086292 29 0.933 - - - - - - 0.933 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
95. CU929052.1 CU929052.1 642 0.933 - - - - - - 0.933 - -
96. si:dkey-122c11.1 ENSDARG00000093747 19 0.933 - - - - - - 0.933 - - si:dkey-122c11.1 [Source:ZFIN;Acc:ZDB-GENE-060531-74]
97. cyp2n13 ENSDARG00000042953 10 0.933 - - - - - - 0.933 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
98. si:ch211-283l16.1 ENSDARG00000112586 131 0.933 - - - - - - 0.933 - - si:ch211-283l16.1 [Source:ZFIN;Acc:ZDB-GENE-110913-44]
99. si:dkey-41e15.4 si:dkey-41e15.4 1 0.933 - - - - - - 0.933 - -
100. ucn3l ENSDARG00000087241 29 0.933 - - - - - - 0.933 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]

There are 544 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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