Multi-species Tomo-Seq Search Chicken Zebrafish Mouse Human Download

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Results for tlr4ba

Gene Name Gene ID Reads Annotation
tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]










Genes with expression patterns similar to tlr4ba

Nr. Gene Name Gene ID Reads Σ scores 28hpf trunk1 28hpf trunk2 28hpf whole1 28hpf whole2 28hpf whole3 PA 40hpf trunk1 40hpf trunk2 40hpf whole embryo1 40hpf whole embryo2 Annotation
1. tlr4ba ENSDARG00000019742, ENSDARG00000113084 20 6 - - 1.000 1.000 1.000 - 1.000 1.000 1.000 toll-like receptor 4b, duplicate a [Source:ZFIN;Acc:ZDB-GENE-040219-8]
2. zgc:173443 ENSDARG00000034403 26 1.781 - - - - - - 0.933 - 0.848 zgc:173443 [Source:ZFIN;Acc:ZDB-GENE-071004-101]
3. sod3b ENSDARG00000079183 39 1.669 - - - - - - 0.922 - 0.747 superoxide dismutase 3, extracellular b [Source:ZFIN;Acc:ZDB-GENE-030131-8743]
4. stc1 ENSDARG00000003303 28 1.604 - - - 0.736 - - 0.868 - - stanniocalcin 1 [Source:ZFIN;Acc:ZDB-GENE-060825-79]
5. CU570691.1 ENSDARG00000088908 5 1 - - - - - - - 1.000 -
6. dio2 ENSDARG00000094857 17 1 - - - - - - 1.000 - - iodothyronine deiodinase 2 [Source:ZFIN;Acc:ZDB-GENE-030327-4]
7. mctp1b ENSDARG00000060871 20 1 - - - - - - 1.000 - - multiple C2 domains, transmembrane 1b [Source:ZFIN;Acc:ZDB-GENE-090313-382]
8. si:ch211-63o20.7 ENSDARG00000042000 93 1 - - - - - - 1.000 - - si:ch211-63o20.7 [Source:ZFIN;Acc:ZDB-GENE-041001-194]
9. NFATC4 ENSDARG00000054162 44 1 - - - - - - 1.000 - - nuclear factor of activated T cells 4 [Source:ZFIN;Acc:ZDB-GENE-070912-659]
10. kcnip3a ENSDARG00000034229 63 1 - - - - - - 1.000 - - Kv channel interacting protein 3a, calsenilin [Source:ZFIN;Acc:ZDB-GENE-040426-1791]
11. si:ch211-152p11.8 46 1 - - - - - - 1.000 - - si:ch211-152p11.8, transcript variant X2
12. si:ch73-60p2.1 si:ch73-60p2.1 21 1 - - - - - - 1.000 - -
13. osgin2 ENSDARG00000040302 45 0.988 - - - - - - 0.988 - - oxidative stress induced growth inhibitor family member 2 [Source:ZFIN;Acc:ZDB-GENE-081028-57]
14. ubxn1_1 ENSDARG00000090309 38 0.984 - - - - - - 0.984 - - UBX domain protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-792]
15. si:ch211-237l4.6 ENSDARG00000056915 49 0.976 - - - - - - 0.976 - - si:ch211-237l4.6 [Source:ZFIN;Acc:ZDB-GENE-040724-42]
16. SLC37A3 176 0.963 - - - - - - 0.963 - - solute carrier family 37 member 3, transcript variant X4
17. CABZ01111953.1 ENSDARG00000099747 38 0.961 - - - - - - 0.961 - - oxysterol-binding protein-related protein 10-like [Source:NCBI gene;Acc:100334085]
18. bmp6 ENSDARG00000015686 211 0.96 - - - - - - 0.960 - - bone morphogenetic protein 6 [Source:ZFIN;Acc:ZDB-GENE-050306-42]
19. kcnt1 ENSDARG00000079484 45 0.96 - - - - - - 0.960 - - potassium channel, subfamily T, member 1 [Source:ZFIN;Acc:ZDB-GENE-091231-1]
20. WNK3 WNK3 36 0.96 - - - - - - 0.960 - -
21. traf3ip1 ENSDARG00000010300 69 0.96 - - - - - - 0.960 - - TNF receptor-associated factor 3 interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-040426-1146]
22. ENSDARG00000092910 ENSDARG00000092910 44 0.96 - - - - - - 0.960 - -
23. si:dkey-10p5.7 26 0.96 - - - - - - 0.960 - - si:dkey-10p5.7
24. NUFIP1 ENSDARG00000101024 229 0.954 - - - - - - 0.954 - - nuclear fragile X mental retardation protein interacting protein 1 [Source:ZFIN;Acc:ZDB-GENE-030131-6203]
25. drd4-rs ENSDARG00000001912 45 0.942 - - - - - - 0.942 - - dopamine receptor D4 related sequence [Source:ZFIN;Acc:ZDB-GENE-051113-172]
26. BX510934.1 ENSDARG00000087544 140 0.942 - - - - - - 0.942 - -
27. rabggta ENSDARG00000061024 332 0.934 - - - - - - 0.934 - - Rab geranylgeranyltransferase subunit alpha [Source:ZFIN;Acc:ZDB-GENE-060929-1042]
28. zgc:172133 ENSDARG00000075248 6 0.933 - - - - - - 0.933 - - zgc:172133 [Source:ZFIN;Acc:ZDB-GENE-080204-48]
29. U1_35 U1_35 1 0.933 - - - - - - 0.933 - -
30. phf21aa ENSDARG00000006878 31 0.933 - - - - - - 0.933 - - PHD finger protein 21Aa [Source:ZFIN;Acc:ZDB-GENE-050208-99]
31. slc6a2 ENSDARG00000016141 49 0.933 - - - - - - 0.933 - - solute carrier family 6 (neurotransmitter transporter), member 2 [Source:ZFIN;Acc:ZDB-GENE-110408-4]
32. si:ch211-190k17.13 si:ch211-190k17.13 48 0.933 - - - - - - 0.933 - -
33. ATP13A5 ATP13A5 13 0.933 - - - - - - 0.933 - -
34. PCDH10 PCDH10 7 0.933 - - - - - - 0.933 - -
35. dctn1a ENSDARG00000019743 45 0.933 - - - - - - 0.933 - - dynactin 1a [Source:ZFIN;Acc:ZDB-GENE-070117-2205]
36. si:dkey-47k20.6 si:dkey-47k20.6 2 0.933 - - - - - - 0.933 - -
37. GRINA GRINA 12 0.933 - - - - - - 0.933 - -
38. FRMD7 ENSDARG00000068958 17 0.933 - - - - - - 0.933 - - FERM domain containing 7 [Source:ZFIN;Acc:ZDB-GENE-060825-67]
39. CLNK 8 0.933 - - - - - - 0.933 - - cytokine dependent hematopoietic cell linker
40. si:ch73-77n15.1 si:ch73-77n15.1 2 0.933 - - - - - - 0.933 - -
41. slc6a18 ENSDARG00000068387 6 0.933 - - - - - - 0.933 - - solute carrier family 6 (neutral amino acid transporter), member 18 [Source:ZFIN;Acc:ZDB-GENE-080219-9]
42. gata4 ENSDARG00000098952 11 0.933 - - - - - - 0.933 - - GATA binding protein 4 [Source:ZFIN;Acc:ZDB-GENE-980526-476]
43. ZC3H12A ENSDARG00000005271 5 0.933 - - - - - - 0.933 - - zinc finger CCCH-type containing 12A [Source:ZFIN;Acc:ZDB-GENE-110411-6]
44. CU672227.1 ENSDARG00000105807 15 0.933 - - - - - - 0.933 - -
45. ucn3l ENSDARG00000087241 29 0.933 - - - - - - 0.933 - - urocortin 3, like [Source:ZFIN;Acc:ZDB-GENE-060130-250]
46. PGBD4_4 PGBD4_4 15 0.933 - - - - - - 0.933 - -
47. zgc:152977 ENSDARG00000077178 59 0.933 - - - - - - 0.933 - - zgc:152977 [Source:ZFIN;Acc:ZDB-GENE-060825-353]
48. PLEKHS1_2 PLEKHS1_2 21 0.933 - - - - - - 0.933 - -
49. nanog ENSDARG00000075113 10 0.933 - - - - - - 0.933 - - nanog homeobox [Source:ZFIN;Acc:ZDB-GENE-030131-5486]
50. si:dkey-150h13.1 si:dkey-150h13.1 1 0.933 - - - - - - 0.933 - -
51. BX901974.1 ENSDARG00000067592 2 0.933 - - - - - - 0.933 - -
52. st6galnac ENSDARG00000086292 29 0.933 - - - - - - 0.933 - - ST6 (alpha-N-acetyl-neuraminyl-2,3-beta-galactosyl-1,3)-N-acetylgalactosaminide alpha-2,6-sialyltransferase [Source:ZFIN;Acc:ZDB-GENE-050309-58]
53. pth2r ENSDARG00000006678, ENSDARG00000112414 46 0.933 - - - - - - 0.933 - - parathyroid hormone 2 receptor [Source:ZFIN;Acc:ZDB-GENE-991123-10]
54. cyp11a1 ENSDARG00000002347, ENSDARG00000111941 209 0.933 - - - - - - 0.933 - - cytochrome P450, family 11, subfamily A, polypeptide 1 [Source:ZFIN;Acc:ZDB-GENE-010306-1]
55. CR762480.5 CR762480.5 1 0.933 - - - - - - 0.933 - -
56. cyp2n13 ENSDARG00000042953 10 0.933 - - - - - - 0.933 - - cytochrome P450, family 2, subfamily N, polypeptide 13 [Source:ZFIN;Acc:ZDB-GENE-041001-158]
57. sh2d1aa ENSDARG00000095348 4 0.933 - - - - - - 0.933 - - SH2 domain containing 1A duplicate a [Source:ZFIN;Acc:ZDB-GENE-060526-212]
58. b3gat3 ENSDARG00000001939 58 0.933 - - - - - - 0.933 - - beta-1,3-glucuronyltransferase 3 (glucuronosyltransferase I) [Source:ZFIN;Acc:ZDB-GENE-020419-3]
59. si:ch211-233h19.2 ENSDARG00000042213 47 0.933 - - - - - - 0.933 - - si:ch211-233h19.2 [Source:ZFIN;Acc:ZDB-GENE-061009-14]
60. si:ch211-226h8.4 ENSDARG00000086221, ENSDARG00000113147 38 0.933 - - - - - - 0.933 - - si:ch211-226h8.4 [Source:ZFIN;Acc:ZDB-GENE-050208-376]
61. pigr ENSDARG00000101890 10 0.933 - - - - - - 0.933 - - polymeric immunoglobulin receptor [Source:ZFIN;Acc:ZDB-GENE-060503-327]
62. si:ch211-234c11.3_1 ENSDARG00000093615 10 0.933 - - - - - - 0.933 - - si:ch211-234c11.3 [Source:ZFIN;Acc:ZDB-GENE-110914-93]
63. rspo1 ENSDARG00000104340, ENSDARG00000111655 13 0.933 - - - - - - 0.933 - - R-spondin 1 [Source:ZFIN;Acc:ZDB-GENE-040718-44]
64. il11a ENSDARG00000037859 5 0.933 - - - - - - 0.933 - - interleukin 11a [Source:ZFIN;Acc:ZDB-GENE-051019-1]
65. LRRC69 LRRC69 1 0.933 - - - - - - 0.933 - -
66. si:ch211-10j20.7 si:ch211-10j20.7 8 0.933 - - - - - - 0.933 - -
67. U1_38 U1_38 1 0.933 - - - - - - 0.933 - -
68. gabrr2b ENSDARG00000014057 9 0.933 - - - - - - 0.933 - - gamma-aminobutyric acid (GABA) A receptor, rho 2b [Source:ZFIN;Acc:ZDB-GENE-041014-174]
69. cx55.5 13 0.933 - - - - - - 0.933 - - connexin 55.5, transcript variant X1
70. si:dkey-41e15.4 si:dkey-41e15.4 1 0.933 - - - - - - 0.933 - -
71. zgc:171551 ENSDARG00000073708, ENSDARG00000111940 24 0.933 - - - - - - 0.933 - - zgc:171551 [Source:ZFIN;Acc:ZDB-GENE-080220-8]
72. pdcb ENSDARG00000017634 10 0.933 - - - - - - 0.933 - - phosducin b [Source:ZFIN;Acc:ZDB-GENE-031023-2]
73. si:ch211-199m9.2 si:ch211-199m9.2 9 0.933 - - - - - - 0.933 - -
74. or106-10 ENSDARG00000091143, ENSDARG00000111913, ENSDARG00000114806 1 0.933 - - - - - - 0.933 - - odorant receptor, family G, subfamily 106, member 10 [Source:ZFIN;Acc:ZDB-GENE-070806-62]
75. wnt3a ENSDARG00000058822 5 0.933 - - - - - - 0.933 - - wingless-type MMTV integration site family, member 3A [Source:ZFIN;Acc:ZDB-GENE-001106-1]
76. CABZ01031933.1 CABZ01031933.1 1 0.933 - - - - - - 0.933 - -
77. CELA1 CELA1 14 0.933 - - - - - - 0.933 - -
78. mtus2 mtus2 22 0.933 - - - - - - 0.933 - -
79. grk7b ENSDARG00000055534 17 0.933 - - - - - - 0.933 - - G protein-coupled receptor kinase 7b [Source:ZFIN;Acc:ZDB-GENE-030904-3]
80. traf1 ENSDARG00000069482 50 0.933 - - - - - - 0.933 - - TNF receptor-associated factor 1 [Source:ZFIN;Acc:ZDB-GENE-071120-4]
81. ubr1 ENSDARG00000060480 71 0.933 - - - - - - 0.933 - - ubiquitin protein ligase E3 component n-recognin 1 [Source:ZFIN;Acc:ZDB-GENE-091110-2]
82. MMP20 MMP20 1 0.933 - - - - - - 0.933 - -
83. si:ch73-189n23.1 ENSDARG00000086247 15 0.933 - - - - - - 0.933 - - si:ch73-189n23.1 [Source:ZFIN;Acc:ZDB-GENE-070705-217]
84. nitr3a_1 ENSDARG00000110676 44 0.933 - - - - - - 0.933 - - novel immune-type receptor 3a [Source:NCBI gene;Acc:60649]
85. zgc:152938 ENSDARG00000102586 97 0.933 - - - - - - 0.933 - - zgc:152938 [Source:ZFIN;Acc:ZDB-GENE-061013-458]
86. si:dkey-148e22.3 si:dkey-148e22.3 4 0.933 - - - - - - 0.933 - -
87. SEMA6B SEMA6B 35 0.933 - - - - - - 0.933 - -
88. BX323836.1 BX323836.1 1 0.933 - - - - - - 0.933 - -
89. FAM177B 9 0.933 - - - - - - 0.933 - - family with sequence similarity 177 member B
90. GALNTL6 ENSDARG00000040048 33 0.933 - - - - - - 0.933 - - polypeptide N-acetylgalactosaminyltransferase like 6 [Source:HGNC Symbol;Acc:HGNC:33844]
91. ppp2r3a ENSDARG00000077722 7 0.933 - - - - - - 0.933 - - protein phosphatase 2, regulatory subunit B'', alpha [Source:ZFIN;Acc:ZDB-GENE-070912-646]
92. avpr2aa ENSDARG00000007436 43 0.933 - - - - - - 0.933 - - arginine vasopressin receptor 2a, duplicate a [Source:ZFIN;Acc:ZDB-GENE-090313-344]
93. si:ch211-239f4.6 ENSDARG00000093347 2 0.933 - - - - - - 0.933 - - si:ch211-239f4.6 [Source:ZFIN;Acc:ZDB-GENE-061009-18]
94. si:ch1073-181h11.2 ENSDARG00000103883 24 0.933 - - - - - - 0.933 - - si:ch1073-181h11.2 [Source:ZFIN;Acc:ZDB-GENE-081031-58]
95. XKR8 XKR8 9 0.933 - - - - - - 0.933 - -
96. g6pcb ENSDARG00000014967 8 0.933 - - - - - - 0.933 - - glucose-6-phosphatase b, catalytic subunit [Source:ZFIN;Acc:ZDB-GENE-081223-2]
97. zp2.5 ENSDARG00000086522 15 0.933 - - - - - - 0.933 - - zona pellucida glycoprotein 2, tandem duplicate 5 [Source:ZFIN;Acc:ZDB-GENE-090306-1]
98. si:ch211-218m3.16 ENSDARG00000044336 33 0.933 - - - - - - 0.933 - - si:ch211-218m3.16 [Source:ZFIN;Acc:ZDB-GENE-091116-19]
99. CR762480.2 ENSDARG00000102728 1 0.933 - - - - - - 0.933 - -
100. lratb 3 0.933 - - - - - - 0.933 - - lecithin retinol acyltransferase b (phosphatidylcholine-retinol O-acyltransferase), transcript variant X2

There are 544 more genes with r >= 0.7  Show all

Yvernogeau L, Morin-Poulard I, Klaus A, Schulte-Merker S, Berezikov E, Junker JP, and Robin C. Multi-species tomo-sequencing identifies new major hematopoietic stem cell regulators in the microenvironment of the embryonic aorta. Submitted.
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